Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_C23
(899 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1042 - 27089563-27089594,27090017-27090577,27090740-27090797 32 0.54
07_01_0862 - 7172083-7172931 27 0.99
12_02_0299 - 17051570-17052474,17053542-17053755 30 2.2
12_02_0506 - 19794383-19794670,19795066-19795140,19795337-197987... 30 2.9
02_02_0691 + 12999452-12999820 29 3.8
10_08_0218 - 15967064-15967906 29 5.0
08_02_0113 - 12715888-12716181,12717443-12717602,12718327-127183... 29 5.0
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 29 5.0
07_03_0111 + 13535912-13535972,13536081-13536142,13536418-135365... 29 5.0
05_04_0341 + 20420657-20420925,20421192-20421246 29 5.0
03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343 29 6.7
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095... 28 8.8
03_06_0587 - 34921535-34922041,34922579-34922689 28 8.8
>06_03_1042 - 27089563-27089594,27090017-27090577,27090740-27090797
Length = 216
Score = 32.3 bits (70), Expect = 0.54
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = +3
Query: 759 PSWXCVAPNPPVQPRTACALIPVPIXLXSTPVXPXLSPLGXQPT 890
P CV P PP +P L P P +P P ++P G PT
Sbjct: 52 PPPYCVYPPPPTKPALPAPLPPTPASPGDSP--PSIAPAGNPPT 93
>07_01_0862 - 7172083-7172931
Length = 282
Score = 26.6 bits (56), Expect(2) = 0.99
Identities = 15/41 (36%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Frame = +3
Query: 681 FSLREAWRXSHXSXCXYLSS-GVXPSAPSWXCVAPNPPVQP 800
F EA ++ C L G + PS CVAP PP P
Sbjct: 91 FDTAEAAAAAYDDACLRLRGPGAALNLPSRRCVAPAPPPPP 131
Score = 23.4 bits (48), Expect(2) = 0.99
Identities = 11/31 (35%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Frame = +3
Query: 786 PPVQPRTACALIPVPIXLXSTPV--XPXLSP 872
PP+ PR L P+P+ P+ P L P
Sbjct: 148 PPLPPRKKAMLFPLPLPPRKKPLLYPPPLPP 178
>12_02_0299 - 17051570-17052474,17053542-17053755
Length = 372
Score = 30.3 bits (65), Expect = 2.2
Identities = 15/35 (42%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Frame = +1
Query: 787 PPFNPEPLAPLSRYLSX*XPPP*XP-XYPPWAXNP 888
PPF P PL P+ PPP P PPW P
Sbjct: 237 PPFLPFPLPPIPFLTPPSPPPPAFPFPLPPWPWAP 271
>12_02_0506 - 19794383-19794670,19795066-19795140,19795337-19798704,
19799503-19799671,19799758-19799850
Length = 1330
Score = 29.9 bits (64), Expect = 2.9
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +2
Query: 740 RCXSFRSKLGLCCTKPPRSTPN 805
+C S R LGLCC+ P S P+
Sbjct: 1242 KCASIRGWLGLCCSTPMESLPS 1263
>02_02_0691 + 12999452-12999820
Length = 122
Score = 29.5 bits (63), Expect = 3.8
Identities = 19/64 (29%), Positives = 26/64 (40%)
Frame = -1
Query: 848 GGXQXDRYRDKGASGSGLNGGVWCNTXPAWSGRTYTGTEIXTX*XMRXAPRFXKGERRTG 669
GG + +R R + ++G GL G V +GR + G R ERR G
Sbjct: 43 GGRRGERERGRRSAGGGLTGAVDAFRPAGEAGRQHAGAAAAAEAEARCETADRARERRHG 102
Query: 668 IPXK 657
I K
Sbjct: 103 IGRK 106
>10_08_0218 - 15967064-15967906
Length = 280
Score = 29.1 bits (62), Expect = 5.0
Identities = 16/34 (47%), Positives = 16/34 (47%)
Frame = -1
Query: 887 GLXAQGG*XGXYGGGXQXDRYRDKGASGSGLNGG 786
G AQGG G GGG Q SGSG GG
Sbjct: 224 GAYAQGGGQGGGGGGGQYGGSGSGSGSGSGQAGG 257
>08_02_0113 - 12715888-12716181,12717443-12717602,12718327-12718368,
12718443-12718465,12718616-12720653,12720736-12720965,
12722207-12722329,12722438-12723010,12724684-12724733,
12726828-12726923,12726987-12727394,12727609-12727795
Length = 1407
Score = 29.1 bits (62), Expect = 5.0
Identities = 18/67 (26%), Positives = 27/67 (40%), Gaps = 2/67 (2%)
Frame = +3
Query: 681 FSLREAWRXSHXSXCXYLSSGVXPSAPSWXCV--APNPPVQPRTACALIPVPIXLXSTPV 854
F +R + +G+ PS+P W AP R A ++PVP S+
Sbjct: 1300 FCIRAVTEMRQMMGVLQIDAGMLPSSPPWMLASCAPGDDAWSRRATVIVPVPASCRSSSC 1359
Query: 855 XPXLSPL 875
LSP+
Sbjct: 1360 R-TLSPV 1365
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = +1
Query: 787 PPFNPEPLAPLSRYLSX*XPPP*XPXYPP 873
PP P P PLS L PPP P PP
Sbjct: 1165 PPATPPPPPPLSPSLPPPPPPPPLPSGPP 1193
>07_03_0111 + 13535912-13535972,13536081-13536142,13536418-13536510,
13537577-13537649,13537876-13538265,13538337-13538404,
13539334-13539375,13540211-13540735,13540817-13540974,
13541078-13541636,13542438-13542500,13542579-13542680,
13542779-13543096,13543175-13543267,13543489-13543590,
13543678-13543782,13544190-13544323,13545097-13545280,
13545701-13545832,13546215-13546327,13546468-13546558,
13547138-13549339
Length = 1889
Score = 29.1 bits (62), Expect = 5.0
Identities = 17/35 (48%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Frame = +1
Query: 787 PPFNPEPLAPLSRY-LSX*XPPP-*XPXYPPWAXN 885
PPFNP P A LS +S PPP P PW N
Sbjct: 1596 PPFNPSPPAILSPLAVSVGLPPPGAIPGVAPWPVN 1630
>05_04_0341 + 20420657-20420925,20421192-20421246
Length = 107
Score = 29.1 bits (62), Expect = 5.0
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -1
Query: 686 GERRTGIPXKRQGRKQESARG 624
GERR G+P +R+GR + RG
Sbjct: 6 GERRPGLPCRRRGRGRREIRG 26
>03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343
Length = 356
Score = 28.7 bits (61), Expect = 6.7
Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Frame = +2
Query: 335 PLPRSLTRCARSF--GCGERYQLTQRR*YGYPQNQGITQ--ERTCEQKASKRPGTV 490
P PRS RC GCG R Q TQR P N IT E TC ++ P +
Sbjct: 150 PYPRSYYRCTHKLDQGCGARRQ-TQRC-EADPSNYDITYYGEHTCRDPSTIIPTAI 203
>10_08_0940 -
21708557-21708733,21709058-21709142,21709330-21709551,
21710640-21710815,21711883-21711946,21712433-21712507,
21715114-21715199,21715297-21716715
Length = 767
Score = 28.3 bits (60), Expect = 8.8
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Frame = +2
Query: 284 NESAN---ARGEAVCVLGALPLPRSLTRCAR 367
+ESAN AR EAV +G +P+ L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464
>03_06_0587 - 34921535-34922041,34922579-34922689
Length = 205
Score = 28.3 bits (60), Expect = 8.8
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = -1
Query: 872 GG*XGXYGGGXQXDRYRDKGASGSGLNGG 786
GG G YG DRY + G G GG
Sbjct: 164 GGGGGRYGSDRGGDRYSGRSRDGGGYGGG 192
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,728,359
Number of Sequences: 37544
Number of extensions: 526155
Number of successful extensions: 1918
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1658
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1902
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2542098580
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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