Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_C23
         (899 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC070198-1|AAH70198.1|  347|Homo sapiens leucine-rich alpha-2-gl...    31   4.3  
AF403428-1|AAK95527.1|  347|Homo sapiens leucine-rich alpha-2-gl...    31   4.3  
AK128030-1|BAC87237.1| 2427|Homo sapiens protein ( Homo sapiens ...    31   5.7  
AK126463-1|BAC86558.1|  559|Homo sapiens protein ( Homo sapiens ...    31   5.7  
AF143946-1|AAD39760.1| 2971|Homo sapiens transcriptional activat...    31   5.7  
AB002307-1|BAA20768.2| 3053|Homo sapiens KIAA0309 protein.             31   5.7  

>BC070198-1|AAH70198.1|  347|Homo sapiens leucine-rich
           alpha-2-glycoprotein 1 protein.
          Length = 347

 Score = 31.5 bits (68), Expect = 4.3
 Identities = 26/87 (29%), Positives = 35/87 (40%)
 Frame = +2

Query: 617 GSSLVRSPVSDPAAXPGYLSAFLPSXSVAXFSXLTLXVSQFRCXSFRSKLGLCCTKPPRS 796
           GSS+   P   PA  PGYL A     +V  F+   L  +  +  S   +L L        
Sbjct: 51  GSSISCQP---PAEIPGYLPADTVHLAVEFFNLTHLPANLLQGASKLQELHLSSNGLESL 107

Query: 797 TPNRLRPYPGTYXLEXHPRXXXLIPPG 877
           +P  LRP P    L+        +PPG
Sbjct: 108 SPEFLRPVPQLRVLDLTRNALTGLPPG 134


>AF403428-1|AAK95527.1|  347|Homo sapiens leucine-rich
           alpha-2-glycoprotein protein.
          Length = 347

 Score = 31.5 bits (68), Expect = 4.3
 Identities = 26/87 (29%), Positives = 35/87 (40%)
 Frame = +2

Query: 617 GSSLVRSPVSDPAAXPGYLSAFLPSXSVAXFSXLTLXVSQFRCXSFRSKLGLCCTKPPRS 796
           GSS+   P   PA  PGYL A     +V  F+   L  +  +  S   +L L        
Sbjct: 51  GSSISCQP---PAEIPGYLPADTVHLAVEFFNLTHLPANLLQGASKLQELHLSSNGLESL 107

Query: 797 TPNRLRPYPGTYXLEXHPRXXXLIPPG 877
           +P  LRP P    L+        +PPG
Sbjct: 108 SPEFLRPVPQLRVLDLTRNALTGLPPG 134


>AK128030-1|BAC87237.1| 2427|Homo sapiens protein ( Homo sapiens cDNA
            FLJ46149 fis, clone TESTI4000621, moderately  similar to
            Homo sapiens Snf2-related CBP activator protein (SRCAP).
            ).
          Length = 2427

 Score = 31.1 bits (67), Expect = 5.7
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = +3

Query: 735  SSGVXPSAPSWXCVAPNPPVQPRTACALIPVPIXLXSTPVXP 860
            +S + P+      +AP PP+ P    +L P P    ++PV P
Sbjct: 1721 ASSLVPTPAQTLSLAPGPPLGPTQTLSLAPAPPLAPASPVGP 1762


>AK126463-1|BAC86558.1|  559|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44499 fis, clone UTERU3000665, highly  similar
           to Homo sapiens Snf2-related CBP activator protein
           (SRCAP). ).
          Length = 559

 Score = 31.1 bits (67), Expect = 5.7
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = +3

Query: 735 SSGVXPSAPSWXCVAPNPPVQPRTACALIPVPIXLXSTPVXP 860
           +S + P+      +AP PP+ P    +L P P    ++PV P
Sbjct: 370 ASSLVPTPAQTLSLAPGPPLGPTQTLSLAPAPPLAPASPVGP 411


>AF143946-1|AAD39760.1| 2971|Homo sapiens transcriptional activator
            SRCAP protein.
          Length = 2971

 Score = 31.1 bits (67), Expect = 5.7
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = +3

Query: 735  SSGVXPSAPSWXCVAPNPPVQPRTACALIPVPIXLXSTPVXP 860
            +S + P+      +AP PP+ P    +L P P    ++PV P
Sbjct: 1462 ASSLVPTPAQTLSLAPGPPLGPTQTLSLAPAPPLAPASPVGP 1503


>AB002307-1|BAA20768.2| 3053|Homo sapiens KIAA0309 protein.
          Length = 3053

 Score = 31.1 bits (67), Expect = 5.7
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = +3

Query: 735  SSGVXPSAPSWXCVAPNPPVQPRTACALIPVPIXLXSTPVXP 860
            +S + P+      +AP PP+ P    +L P P    ++PV P
Sbjct: 1544 ASSLVPTPAQTLSLAPGPPLGPTQTLSLAPAPPLAPASPVGP 1585


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,784,269
Number of Sequences: 237096
Number of extensions: 2717362
Number of successful extensions: 8111
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7558
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8076
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11603768198
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)