Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_C23
         (899 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41024-1|AAA82345.2|  679|Caenorhabditis elegans Hypothetical pr...    29   3.4  
AF000193-3|AAB52890.1|  259|Caenorhabditis elegans Hypothetical ...    28   7.9  

>U41024-1|AAA82345.2|  679|Caenorhabditis elegans Hypothetical
           protein T14G11.3 protein.
          Length = 679

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +3

Query: 774 VAPNPPVQPRTACALIPVPIXLXSTPVXPXLSP 872
           +AP PPV PR    + PV +    TP+ P  SP
Sbjct: 121 LAPLPPVLPREPTHVDPVDVRKDVTPMIPKPSP 153


>AF000193-3|AAB52890.1|  259|Caenorhabditis elegans Hypothetical
           protein T20B6.3 protein.
          Length = 259

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 13/29 (44%), Positives = 13/29 (44%)
 Frame = -1

Query: 872 GG*XGXYGGGXQXDRYRDKGASGSGLNGG 786
           GG  G YGGG     Y   G  G G  GG
Sbjct: 190 GGGMGGYGGGMGGGGYGGGGMGGGGYGGG 218


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,587,147
Number of Sequences: 27780
Number of extensions: 384830
Number of successful extensions: 1085
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 964
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1079
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2286823924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)