Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_C22
         (881 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_07_0206 + 41990251-41992032,41992131-41992361                       30   2.8  
04_04_1179 - 31512592-31515126                                         29   3.7  
04_04_0058 - 22416949-22418196                                         29   3.7  
10_08_0338 + 16916429-16916650,16916728-16917900                       29   4.9  
10_08_0214 - 15915156-15915713                                         29   6.5  
02_01_0508 + 3688042-3688101,3688206-3688260,3688380-3688453,368...    29   6.5  
08_01_0073 - 522751-522777,523022-523306                               28   8.6  
01_06_1336 + 36396904-36397014,36397141-36397191,36397681-363977...    28   8.6  
01_01_0446 + 3321832-3322232,3322398-3322455,3322810-3323748,332...    28   8.6  

>01_07_0206 + 41990251-41992032,41992131-41992361
          Length = 670

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 23/84 (27%), Positives = 35/84 (41%), Gaps = 8/84 (9%)
 Frame = +2

Query: 143 YWEDEEGYPVSGQFSKRHPRDVTWDKQVGG-----GKVFGTLGQNDDGLFGKAGYNREIF 307
           Y  D EG P+    S+R  R   W++Q+GG      +++G     D  L     +NR+  
Sbjct: 216 YQFDGEGKPMEDFDSERSRRACLWERQIGGRGDDVNELYGPSSCKD--LLTLYNFNRQYV 273

Query: 308 NDDR---GKLTGAGLRHQGSWGPA 370
           N D+    K         G W P+
Sbjct: 274 NMDKTWLSKQAEMSTLQLGQWKPS 297


>04_04_1179 - 31512592-31515126
          Length = 844

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = -2

Query: 178 TANWISFFVLPINFCVDTHQDPW 110
           TA+W +F VLP N+C+  H  P+
Sbjct: 86  TASWYNFSVLPGNYCLRLHFFPY 108


>04_04_0058 - 22416949-22418196
          Length = 415

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 15/31 (48%), Positives = 17/31 (54%)
 Frame = -2

Query: 409 PQSRRPP*FVLSPCGSPGPLVP*ACPGQFAA 317
           P S  PP  +L+P  SP P  P ACP  F A
Sbjct: 25  PLSPPPPSVILTPFASPSP-APWACPPAFPA 54


>10_08_0338 + 16916429-16916650,16916728-16917900
          Length = 464

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 15/31 (48%), Positives = 16/31 (51%)
 Frame = +3

Query: 330 PGQAYGTRGPGDPQGDSTNYGGRLDWGNKNA 422
           PG AYG  G G   G    YGG   +GN NA
Sbjct: 280 PGTAYGNYGAGGFGGVPAGYGGH--YGNPNA 308


>10_08_0214 - 15915156-15915713
          Length = 185

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 18/51 (35%), Positives = 23/51 (45%)
 Frame = +2

Query: 224 VGGGKVFGTLGQNDDGLFGKAGYNREIFNDDRGKLTGAGLRHQGSWGPAGG 376
           VGG   +G+ G    G  G AG   +      G  +GAG  H G +G  GG
Sbjct: 105 VGGAGGYGSGGGGGGGQGGGAGGYGQGSGYGSGYGSGAGGAHGGGYGSGGG 155


>02_01_0508 +
           3688042-3688101,3688206-3688260,3688380-3688453,
           3689612-3689704,3689809-3689852,3689950-3690664,
           3690748-3690936
          Length = 409

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = +2

Query: 458 QIWNDQXQAQECGILTETPASQPGVWSXKNSVTEDQT 568
           ++W +    + CG + ETP   P +    N +TE++T
Sbjct: 59  ELWREANYLKSCGAIGETP---PEMLKGSNQITEEET 92


>08_01_0073 - 522751-522777,523022-523306
          Length = 103

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -3

Query: 405 SLDVHRSLYCPPAGPQDPWCRRPAP 331
           SL + R+     AG  DPW R+PAP
Sbjct: 65  SLSLPRAAAAAVAGTLDPWRRKPAP 89


>01_06_1336 +
           36396904-36397014,36397141-36397191,36397681-36397757,
           36397876-36397963,36398616-36398891,36399002-36399250,
           36400315-36400398
          Length = 311

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -3

Query: 420 HSYCPSLDVHRSLYCPPAGPQDPW 349
           H++C S  VH S Y P   P   W
Sbjct: 190 HNFCQSTGVHLSAYSPLGSPGSTW 213


>01_01_0446 +
           3321832-3322232,3322398-3322455,3322810-3323748,
           3324504-3324654,3324740-3324818,3325826-3325934
          Length = 578

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = +2

Query: 230 GGKVFGTLGQNDDGLFGKAGYNREIFNDDRGKLTGAGLRHQGS 358
           GG+  GT G    G + + G +   F+D RG   G G R QG+
Sbjct: 244 GGRGGGTGGGGRGGGYNRGGGDDRGFDDHRGGRGGYGGRDQGN 286


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,664,166
Number of Sequences: 37544
Number of extensions: 488499
Number of successful extensions: 1300
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1233
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1299
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)