Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_C22
(881 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB002344-1|BAA21572.2| 1682|Homo sapiens KIAA0346 protein. 31 7.3
BC071596-1|AAH71596.1| 1287|Homo sapiens RAB6 interacting protei... 30 9.7
BC050632-1|AAH50632.1| 399|Homo sapiens lymphoid enhancer-bindi... 30 9.7
BC009354-1|AAH09354.2| 948|Homo sapiens RAB6IP1 protein protein. 30 9.7
AK025499-1|BAB15155.1| 872|Homo sapiens protein ( Homo sapiens ... 30 9.7
AF294627-1|AAG26886.1| 329|Homo sapiens lymphoid enhancer facto... 30 9.7
AF288571-1|AAG01022.1| 399|Homo sapiens lymphoid enhancer facto... 30 9.7
AF198532-1|AAF13268.1| 399|Homo sapiens lymphoid enhancer bindi... 30 9.7
AB209378-1|BAD92615.1| 317|Homo sapiens T-box 2 variant protein. 30 9.7
AB029014-1|BAA83043.1| 1359|Homo sapiens KIAA1091 protein protein. 30 9.7
>AB002344-1|BAA21572.2| 1682|Homo sapiens KIAA0346 protein.
Length = 1682
Score = 30.7 bits (66), Expect = 7.3
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = -2
Query: 502 QDPTLLSLXLVIPDLPPICLFISIAASAFLLPQSRRP-P*FVLSPCGSPGP 353
QDP L+ L L +P PP + + S F P+S RP F +P PGP
Sbjct: 595 QDPPLVPLTLALPPAPPSSCHQNTSGS-FRRPESPRPRVSFPKTPEVGPGP 644
>BC071596-1|AAH71596.1| 1287|Homo sapiens RAB6 interacting protein 1
protein.
Length = 1287
Score = 30.3 bits (65), Expect = 9.7
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +3
Query: 144 IGRTKKDIQLAVSFQSDTRVTSPGTNKWGEGRSSARWAK 260
IG+ K + QSD T P +NKW + + A+W +
Sbjct: 660 IGQGKYEPGFFPKLQSDVLSTGPASNKWTKRNAPAQWRR 698
>BC050632-1|AAH50632.1| 399|Homo sapiens lymphoid enhancer-binding
factor 1 protein.
Length = 399
Score = 30.3 bits (65), Expect = 9.7
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = +2
Query: 86 IPNYYISSPRVLVCVNAEVYWEDEEGYPVSGQFSKRHPRDVTWD 217
IP +Y SP + + + W+ + YP++G F + +P ++ D
Sbjct: 193 IPTFYPLSPGGVGQITPPLGWQGQPVYPITGGFRQPYPSSLSVD 236
>BC009354-1|AAH09354.2| 948|Homo sapiens RAB6IP1 protein protein.
Length = 948
Score = 30.3 bits (65), Expect = 9.7
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +3
Query: 144 IGRTKKDIQLAVSFQSDTRVTSPGTNKWGEGRSSARWAK 260
IG+ K + QSD T P +NKW + + A+W +
Sbjct: 321 IGQGKYEPGFFPKLQSDVLSTGPASNKWTKRNAPAQWRR 359
>AK025499-1|BAB15155.1| 872|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21846 fis, clone HEP01887. ).
Length = 872
Score = 30.3 bits (65), Expect = 9.7
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +3
Query: 144 IGRTKKDIQLAVSFQSDTRVTSPGTNKWGEGRSSARWAK 260
IG+ K + QSD T P +NKW + + A+W +
Sbjct: 245 IGQGKYEPGFFPKLQSDVLSTGPASNKWTKRNAPAQWRR 283
>AF294627-1|AAG26886.1| 329|Homo sapiens lymphoid enhancer factor 1
isoform protein.
Length = 329
Score = 30.3 bits (65), Expect = 9.7
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = +2
Query: 86 IPNYYISSPRVLVCVNAEVYWEDEEGYPVSGQFSKRHPRDVTWD 217
IP +Y SP + + + W+ + YP++G F + +P ++ D
Sbjct: 193 IPTFYPLSPGGVGQITPPLGWQGQPVYPITGGFRQPYPSSLSVD 236
>AF288571-1|AAG01022.1| 399|Homo sapiens lymphoid enhancer factor-1
protein.
Length = 399
Score = 30.3 bits (65), Expect = 9.7
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = +2
Query: 86 IPNYYISSPRVLVCVNAEVYWEDEEGYPVSGQFSKRHPRDVTWD 217
IP +Y SP + + + W+ + YP++G F + +P ++ D
Sbjct: 193 IPTFYPLSPGGVGQITPPLGWQGQPVYPITGGFRQPYPSSLSVD 236
>AF198532-1|AAF13268.1| 399|Homo sapiens lymphoid enhancer binding
factor-1 protein.
Length = 399
Score = 30.3 bits (65), Expect = 9.7
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = +2
Query: 86 IPNYYISSPRVLVCVNAEVYWEDEEGYPVSGQFSKRHPRDVTWD 217
IP +Y SP + + + W+ + YP++G F + +P ++ D
Sbjct: 193 IPTFYPLSPGGVGQITPPLGWQGQPVYPITGGFRQPYPSSLSVD 236
>AB209378-1|BAD92615.1| 317|Homo sapiens T-box 2 variant protein.
Length = 317
Score = 30.3 bits (65), Expect = 9.7
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 204 TSPGTNKWGEGRSSARWAKMMM 269
T GT +WG GRSS RWA +++
Sbjct: 292 TGGGTGRWG-GRSSGRWAGLLL 312
>AB029014-1|BAA83043.1| 1359|Homo sapiens KIAA1091 protein protein.
Length = 1359
Score = 30.3 bits (65), Expect = 9.7
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +3
Query: 144 IGRTKKDIQLAVSFQSDTRVTSPGTNKWGEGRSSARWAK 260
IG+ K + QSD T P +NKW + + A+W +
Sbjct: 732 IGQGKYEPGFFPKLQSDVLSTGPASNKWTKRNAPAQWRR 770
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,979,028
Number of Sequences: 237096
Number of extensions: 2738627
Number of successful extensions: 6596
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5952
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6583
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11270645666
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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