Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_C22
         (881 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U39666-1|AAA80412.2|  644|Caenorhabditis elegans Nematode astaci...    29   4.4  
AL117202-13|CAB55075.1|  580|Caenorhabditis elegans Hypothetical...    29   5.8  
U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical pr...    28   7.7  

>U39666-1|AAA80412.2|  644|Caenorhabditis elegans Nematode astacin
           protease protein33 protein.
          Length = 644

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 12/25 (48%), Positives = 13/25 (52%)
 Frame = -3

Query: 393 HRSLYCPPAGPQDPWCRRPAPVNLP 319
           HR+   PP GP  PW R P P   P
Sbjct: 45  HRNRGPPPFGPPPPWDRPPPPWRRP 69


>AL117202-13|CAB55075.1|  580|Caenorhabditis elegans Hypothetical
           protein Y47D3A.16 protein.
          Length = 580

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
 Frame = +3

Query: 333 GQAYGTRGPGDPQGDSTNYGGRLD-WGN-KNAEAAIDINRQIGGRSGMTSXRLRSVGS*Q 506
           G A   R PGDP+  S  +GG  + +G+  N+EA       IG  S MT+      G  Q
Sbjct: 435 GAAKSPRKPGDPETASILHGGHSNLFGHGPNSEAPQAFGYGIG--SQMTTTTAGGAGIQQ 492

Query: 507 KHPPLSRGY 533
            +   S GY
Sbjct: 493 PYQSFSGGY 501


>U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical protein
            B0207.5 protein.
          Length = 3279

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +3

Query: 192  DTRVTSPGTNKWGEGRSSARWAKMMMGFLVKP 287
            +TR  + GTNK  +GR+  R   M +G ++KP
Sbjct: 3195 ETRTRNKGTNKRRDGRNDGR--NMNLGSIIKP 3224


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,584,786
Number of Sequences: 27780
Number of extensions: 379237
Number of successful extensions: 960
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 905
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 960
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)