Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_C19
         (850 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U19927-1|AAC50140.1|  502|Homo sapiens WAS protein.                    31   4.0  
U12707-1|AAA62663.1|  502|Homo sapiens Wiskott-Aldrich syndrome ...    31   4.0  
BC012738-1|AAH12738.1|  502|Homo sapiens Wiskott-Aldrich syndrom...    31   4.0  
BC002961-1|AAH02961.1|  514|Homo sapiens WAS protein protein.          31   4.0  
AK129846-1|BAC85241.1|  236|Homo sapiens protein ( Homo sapiens ...    31   4.0  
AF115549-1|AAD26691.1|  502|Homo sapiens Wiskott-Aldrich Syndrom...    31   4.0  

>U19927-1|AAC50140.1|  502|Homo sapiens WAS protein.
          Length = 502

 Score = 31.5 bits (68), Expect = 4.0
 Identities = 13/31 (41%), Positives = 13/31 (41%)
 Frame = +3

Query: 729 PXXGGXXPXXXGGXPPPPPXXXXXXXGXPPP 821
           P   G  P   GG PPPPP         PPP
Sbjct: 354 PTPRGPPPPGRGGPPPPPPPATGRSGPLPPP 384


>U12707-1|AAA62663.1|  502|Homo sapiens Wiskott-Aldrich syndrome
           protein protein.
          Length = 502

 Score = 31.5 bits (68), Expect = 4.0
 Identities = 13/31 (41%), Positives = 13/31 (41%)
 Frame = +3

Query: 729 PXXGGXXPXXXGGXPPPPPXXXXXXXGXPPP 821
           P   G  P   GG PPPPP         PPP
Sbjct: 354 PTPRGPPPPGRGGPPPPPPPATGRSGPLPPP 384


>BC012738-1|AAH12738.1|  502|Homo sapiens Wiskott-Aldrich syndrome
           (eczema-thrombocytopenia) protein.
          Length = 502

 Score = 31.5 bits (68), Expect = 4.0
 Identities = 13/31 (41%), Positives = 13/31 (41%)
 Frame = +3

Query: 729 PXXGGXXPXXXGGXPPPPPXXXXXXXGXPPP 821
           P   G  P   GG PPPPP         PPP
Sbjct: 354 PTPRGPPPPGRGGPPPPPPPATGRSGPLPPP 384


>BC002961-1|AAH02961.1|  514|Homo sapiens WAS protein protein.
          Length = 514

 Score = 31.5 bits (68), Expect = 4.0
 Identities = 13/31 (41%), Positives = 13/31 (41%)
 Frame = +3

Query: 729 PXXGGXXPXXXGGXPPPPPXXXXXXXGXPPP 821
           P   G  P   GG PPPPP         PPP
Sbjct: 366 PTPRGPPPPGRGGPPPPPPPATGRSGPLPPP 396


>AK129846-1|BAC85241.1|  236|Homo sapiens protein ( Homo sapiens
           cDNA FLJ26336 fis, clone HRT02842. ).
          Length = 236

 Score = 31.5 bits (68), Expect = 4.0
 Identities = 14/45 (31%), Positives = 24/45 (53%)
 Frame = +2

Query: 419 ISIFTMSHYVMWFLDYISNI*HTTVIAFLRVTECIYYYIHILNYV 553
           IS+FT +H  +    YI    H  +  ++ +  C+Y YIH+  Y+
Sbjct: 164 ISVFTCTHVYICVFIYICI--HVYIHIYICIHICVYSYIHMYTYI 206


>AF115549-1|AAD26691.1|  502|Homo sapiens Wiskott-Aldrich Syndrome
           protein protein.
          Length = 502

 Score = 31.5 bits (68), Expect = 4.0
 Identities = 13/31 (41%), Positives = 13/31 (41%)
 Frame = +3

Query: 729 PXXGGXXPXXXGGXPPPPPXXXXXXXGXPPP 821
           P   G  P   GG PPPPP         PPP
Sbjct: 354 PTPRGPPPPGRGGPPPPPPPATGRSGPLPPP 384


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,123,020
Number of Sequences: 237096
Number of extensions: 1911604
Number of successful extensions: 8755
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4377
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7566
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10761200974
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)