Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_C19
(850 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 35 0.084
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 35 0.084
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 35 0.084
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 32 0.45
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 32 0.45
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 32 0.45
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 32 0.45
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 32 0.45
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 29 3.2
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 3.2
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 4.2
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 4.2
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 4.2
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 29 5.5
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 29 5.5
AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical ... 28 9.6
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 34.7 bits (76), Expect = 0.084
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +3
Query: 729 PXXGGXXPXXXGGXPPPPPXXXXXXXGXPPP 821
P GG P G PPPPP G PPP
Sbjct: 730 PPPGGLPPITGGPPPPPPPGGLPPISGGPPP 760
Score = 31.5 bits (68), Expect = 0.78
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +3
Query: 729 PXXGGXXPXXXGGXPPPPPXXXXXXXGXPPP 821
P G P G PPPPP G PPP
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPP 744
Score = 31.5 bits (68), Expect = 0.78
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +3
Query: 729 PXXGGXXPXXXGGXPPPPPXXXXXXXGXPPP 821
P G P GG PPPPP PPP
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 775
Score = 31.5 bits (68), Expect = 0.78
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +3
Query: 729 PXXGGXXPXXXGGXPPPPPXXXXXXXGXPPP 821
P GG P G PPPPP PPP
Sbjct: 746 PPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 776
Score = 28.3 bits (60), Expect = 7.3
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +1
Query: 742 GXLPXXXGAPXPPXPXXXXXXXGXPPPXXXP 834
G P G P PP P G PPP P
Sbjct: 718 GLPPITGGPPPPPPPGGLPPITGGPPPPPPP 748
Score = 28.3 bits (60), Expect = 7.3
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +1
Query: 742 GXLPXXXGAPXPPXPXXXXXXXGXPPPXXXP 834
G P G P PP P G PPP P
Sbjct: 734 GLPPITGGPPPPPPPGGLPPISGGPPPPPPP 764
Score = 28.3 bits (60), Expect = 7.3
Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 3/34 (8%)
Frame = +3
Query: 729 PXXGGXXPXXX--GG-XPPPPPXXXXXXXGXPPP 821
P GG P GG PPPPP G PPP
Sbjct: 753 PISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 786
Score = 27.9 bits (59), Expect = 9.6
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +3
Query: 765 GXPPPPPXXXXXXXGXPPP 821
G PPPPP G PPP
Sbjct: 711 GGPPPPPGLPPITGGPPPP 729
Score = 27.9 bits (59), Expect = 9.6
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = +1
Query: 751 PXXXGAPXPPXPXXXXXXXGXPPPXXXP 834
P G P PP P G PPP P
Sbjct: 763 PPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 34.7 bits (76), Expect = 0.084
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +3
Query: 729 PXXGGXXPXXXGGXPPPPPXXXXXXXGXPPP 821
P GG P G PPPPP G PPP
Sbjct: 730 PPPGGLPPITGGPPPPPPPGGLPPISGGPPP 760
Score = 31.5 bits (68), Expect = 0.78
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +3
Query: 729 PXXGGXXPXXXGGXPPPPPXXXXXXXGXPPP 821
P G P G PPPPP G PPP
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPP 744
Score = 31.5 bits (68), Expect = 0.78
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +3
Query: 729 PXXGGXXPXXXGGXPPPPPXXXXXXXGXPPP 821
P G P GG PPPPP PPP
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 775
Score = 31.5 bits (68), Expect = 0.78
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +3
Query: 729 PXXGGXXPXXXGGXPPPPPXXXXXXXGXPPP 821
P GG P G PPPPP PPP
Sbjct: 746 PPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 776
Score = 28.3 bits (60), Expect = 7.3
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +1
Query: 742 GXLPXXXGAPXPPXPXXXXXXXGXPPPXXXP 834
G P G P PP P G PPP P
Sbjct: 718 GLPPITGGPPPPPPPGGLPPITGGPPPPPPP 748
Score = 28.3 bits (60), Expect = 7.3
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +1
Query: 742 GXLPXXXGAPXPPXPXXXXXXXGXPPPXXXP 834
G P G P PP P G PPP P
Sbjct: 734 GLPPITGGPPPPPPPGGLPPISGGPPPPPPP 764
Score = 28.3 bits (60), Expect = 7.3
Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 3/34 (8%)
Frame = +3
Query: 729 PXXGGXXPXXX--GG-XPPPPPXXXXXXXGXPPP 821
P GG P GG PPPPP G PPP
Sbjct: 753 PISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 786
Score = 27.9 bits (59), Expect = 9.6
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +3
Query: 765 GXPPPPPXXXXXXXGXPPP 821
G PPPPP G PPP
Sbjct: 711 GGPPPPPGLPPITGGPPPP 729
Score = 27.9 bits (59), Expect = 9.6
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = +1
Query: 751 PXXXGAPXPPXPXXXXXXXGXPPPXXXP 834
P G P PP P G PPP P
Sbjct: 763 PPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 34.7 bits (76), Expect = 0.084
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +3
Query: 729 PXXGGXXPXXXGGXPPPPPXXXXXXXGXPPP 821
P GG P G PPPPP G PPP
Sbjct: 313 PPPGGLPPITGGPPPPPPPGGLPPISGGPPP 343
Score = 31.5 bits (68), Expect = 0.78
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +3
Query: 729 PXXGGXXPXXXGGXPPPPPXXXXXXXGXPPP 821
P G P G PPPPP G PPP
Sbjct: 297 PPPPGLPPITGGPPPPPPPGGLPPITGGPPP 327
Score = 31.5 bits (68), Expect = 0.78
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +3
Query: 729 PXXGGXXPXXXGGXPPPPPXXXXXXXGXPPP 821
P G P GG PPPPP PPP
Sbjct: 328 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 358
Score = 31.5 bits (68), Expect = 0.78
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +3
Query: 729 PXXGGXXPXXXGGXPPPPPXXXXXXXGXPPP 821
P GG P G PPPPP PPP
Sbjct: 329 PPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 359
Score = 28.3 bits (60), Expect = 7.3
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +1
Query: 742 GXLPXXXGAPXPPXPXXXXXXXGXPPPXXXP 834
G P G P PP P G PPP P
Sbjct: 301 GLPPITGGPPPPPPPGGLPPITGGPPPPPPP 331
Score = 28.3 bits (60), Expect = 7.3
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +1
Query: 742 GXLPXXXGAPXPPXPXXXXXXXGXPPPXXXP 834
G P G P PP P G PPP P
Sbjct: 317 GLPPITGGPPPPPPPGGLPPISGGPPPPPPP 347
Score = 28.3 bits (60), Expect = 7.3
Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 3/34 (8%)
Frame = +3
Query: 729 PXXGGXXPXXX--GG-XPPPPPXXXXXXXGXPPP 821
P GG P GG PPPPP G PPP
Sbjct: 336 PISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 369
Score = 27.9 bits (59), Expect = 9.6
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +3
Query: 765 GXPPPPPXXXXXXXGXPPP 821
G PPPPP G PPP
Sbjct: 294 GGPPPPPGLPPITGGPPPP 312
Score = 27.9 bits (59), Expect = 9.6
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = +1
Query: 751 PXXXGAPXPPXPXXXXXXXGXPPPXXXP 834
P G P PP P G PPP P
Sbjct: 346 PPPGGCPPPPPPPPPGGFKGGPPPPPPP 373
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 32.3 bits (70), Expect = 0.45
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +3
Query: 729 PXXGGXXPXXXGGXPPPPPXXXXXXXGXPPP 821
P P GG PPPPP G PPP
Sbjct: 320 PPPSRFGPPGMGGMPPPPPPGMRYPGGMPPP 350
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 32.3 bits (70), Expect = 0.45
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +3
Query: 729 PXXGGXXPXXXGGXPPPPPXXXXXXXGXPPP 821
P P GG PPPPP G PPP
Sbjct: 330 PPPSRFGPPGMGGMPPPPPPGMRYPGGMPPP 360
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 32.3 bits (70), Expect = 0.45
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +3
Query: 729 PXXGGXXPXXXGGXPPPPPXXXXXXXGXPPP 821
P GG P G PPPPP PPP
Sbjct: 220 PPIGGIAPVNAHGAPPPPPLPPVGAGAPPPP 250
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 32.3 bits (70), Expect = 0.45
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +3
Query: 729 PXXGGXXPXXXGGXPPPPPXXXXXXXGXPPP 821
P GG P G PPPPP PPP
Sbjct: 206 PPIGGIAPVNAHGAPPPPPLPPVGAGAPPPP 236
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 32.3 bits (70), Expect = 0.45
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +3
Query: 729 PXXGGXXPXXXGGXPPPPPXXXXXXXGXPPP 821
P GG P G PPPPP PPP
Sbjct: 206 PPIGGIAPVNAHGAPPPPPLPPVGAGAPPPP 236
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +1
Query: 742 GXLPXXXGAPXPPXPXXXXXXXGXPPP 822
G P GAP PP P G PPP
Sbjct: 527 GMAPLSTGAPTPPPPPPVGMANGGPPP 553
Score = 29.1 bits (62), Expect = 4.2
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +3
Query: 729 PXXGGXXPXXXGGXPPPPPXXXXXXXGXPPP 821
P G P G PPPP G PPP
Sbjct: 523 PPMPGMAPLSTGAPTPPPPPPVGMANGGPPP 553
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.5 bits (63), Expect = 3.2
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +3
Query: 750 PXXXGGXPPPPPXXXXXXXGXPPP 821
P G PPPPP G PPP
Sbjct: 569 PQNLSGAPPPPPPPPPMLGGPPPP 592
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.1 bits (62), Expect = 4.2
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +3
Query: 729 PXXGGXXPXXXGGXPPPPPXXXXXXXGXPPP 821
P G P G PPPPP G PP
Sbjct: 284 PAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 314
Score = 28.3 bits (60), Expect = 7.3
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +3
Query: 729 PXXGGXXPXXXGGXPPPPPXXXXXXXGXPPP 821
P GG P G PPPPP PP
Sbjct: 315 PQAGGSPPPAGTGSPPPPPRQKRQAPERSPP 345
Score = 27.9 bits (59), Expect = 9.6
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +3
Query: 729 PXXGGXXPXXXGGXPPPPP 785
P GG P G PPPPP
Sbjct: 283 PPAGGSPPPPRAGSPPPPP 301
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.1 bits (62), Expect = 4.2
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +3
Query: 729 PXXGGXXPXXXGGXPPPPPXXXXXXXGXPPP 821
P G P G PPPPP G PP
Sbjct: 305 PAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 335
Score = 28.3 bits (60), Expect = 7.3
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +3
Query: 729 PXXGGXXPXXXGGXPPPPPXXXXXXXGXPPP 821
P GG P G PPPPP PP
Sbjct: 336 PQAGGSPPPAGTGSPPPPPRQKRQAPERSPP 366
Score = 27.9 bits (59), Expect = 9.6
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +3
Query: 729 PXXGGXXPXXXGGXPPPPP 785
P GG P G PPPPP
Sbjct: 304 PPAGGSPPPPRAGSPPPPP 322
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.1 bits (62), Expect = 4.2
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +3
Query: 729 PXXGGXXPXXXGGXPPPPPXXXXXXXGXPPP 821
P G P G PPPPP G PP
Sbjct: 290 PAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 320
Score = 28.3 bits (60), Expect = 7.3
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +3
Query: 729 PXXGGXXPXXXGGXPPPPPXXXXXXXGXPPP 821
P GG P G PPPPP PP
Sbjct: 321 PQAGGSPPPAGTGSPPPPPRQKRQAPERSPP 351
Score = 27.9 bits (59), Expect = 9.6
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +3
Query: 729 PXXGGXXPXXXGGXPPPPP 785
P GG P G PPPPP
Sbjct: 289 PPAGGSPPPPRAGSPPPPP 307
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 28.7 bits (61), Expect = 5.5
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +3
Query: 750 PXXXGGXPPPPPXXXXXXXGXPPP 821
P G PPPPP G PPP
Sbjct: 673 PPGGGQGPPPPPQGQQYYGGPPPP 696
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 28.7 bits (61), Expect = 5.5
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +3
Query: 750 PXXXGGXPPPPPXXXXXXXGXPPP 821
P G PPPPP G PPP
Sbjct: 673 PPGGGQGPPPPPQGQQYYGGPPPP 696
>AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical
protein Y53H1A.1 protein.
Length = 613
Score = 27.9 bits (59), Expect = 9.6
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +3
Query: 765 GXPPPPPXXXXXXXGXPPP 821
G PPPPP G PPP
Sbjct: 98 GYPPPPPQGADTWRGAPPP 116
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,112,238
Number of Sequences: 27780
Number of extensions: 299316
Number of successful extensions: 1308
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 770
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1147
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2108493618
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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