Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_C18
         (889 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-3283|AAM71018.2| 2968|Drosophila melanogaster CG13492-P...    30   3.7  
AE013599-3282|AAF46766.2| 2931|Drosophila melanogaster CG13492-P...    30   3.7  
AE014298-1554|AAF48000.3| 3539|Drosophila melanogaster CG11122-P...    29   6.5  

>AE013599-3283|AAM71018.2| 2968|Drosophila melanogaster CG13492-PB,
            isoform B protein.
          Length = 2968

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
 Frame = -2

Query: 501  IAVGDSLIRGIGCGTELQ-SEVVVSVNDLDIVSGHD 397
            I VGD  I+ +GC T+LQ S ++ +  DL + SG D
Sbjct: 1060 IHVGDLSIKAMGCATDLQDSFLLTNRRDLYLCSGDD 1095


>AE013599-3282|AAF46766.2| 2931|Drosophila melanogaster CG13492-PA,
            isoform A protein.
          Length = 2931

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
 Frame = -2

Query: 501  IAVGDSLIRGIGCGTELQ-SEVVVSVNDLDIVSGHD 397
            I VGD  I+ +GC T+LQ S ++ +  DL + SG D
Sbjct: 1023 IHVGDLSIKAMGCATDLQDSFLLTNRRDLYLCSGDD 1058


>AE014298-1554|AAF48000.3| 3539|Drosophila melanogaster CG11122-PA
           protein.
          Length = 3539

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 17/38 (44%), Positives = 22/38 (57%)
 Frame = +2

Query: 116 ACSPPARASLNYPRTLLTKTSRRNCTTASSPATTTVLS 229
           +CSP + ++     T  T+TS  N T  SS ATTTV S
Sbjct: 747 SCSPSSSSASTLLSTA-TRTSMSNSTCTSSAATTTVSS 783


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,139,296
Number of Sequences: 53049
Number of extensions: 700135
Number of successful extensions: 1686
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1587
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1683
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4332305172
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)