Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_C17
(961 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 38 0.011
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 34 0.17
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 33 0.30
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 33 0.40
AL033514-24|CAA22108.1| 2121|Caenorhabditis elegans Hypothetical... 33 0.40
Z19158-2|CAA79571.3| 262|Caenorhabditis elegans Hypothetical pr... 32 0.53
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 32 0.53
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 32 0.53
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 32 0.70
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 32 0.70
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 31 0.93
AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical ... 31 0.93
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 31 1.6
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 3.7
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 3.7
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 3.7
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 29 4.9
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 4.9
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 4.9
AF101312-1|AAC69221.3| 813|Caenorhabditis elegans Hypothetical ... 29 4.9
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 4.9
AC006708-23|AAF60414.1| 975|Caenorhabditis elegans Paz/piwi dom... 29 4.9
U97196-12|AAB52456.2| 564|Caenorhabditis elegans Hypothetical p... 29 6.5
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 29 6.5
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 29 6.5
AL132949-22|CAB70112.2| 603|Caenorhabditis elegans Hypothetical... 29 6.5
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 28 8.6
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 37.9 bits (84), Expect = 0.011
Identities = 21/57 (36%), Positives = 24/57 (42%), Gaps = 4/57 (7%)
Frame = +2
Query: 710 PXCPPXCPXIPXPR-XFXLKXSXTPXPPXGKXPXSXP---PXXPPXVPPSPXXXPXP 868
P PP P P PR + TP P + P + P P PP PPSP P P
Sbjct: 140 PPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPPSPIPPPPP 196
Score = 33.9 bits (74), Expect = 0.17
Identities = 18/49 (36%), Positives = 20/49 (40%), Gaps = 5/49 (10%)
Frame = +2
Query: 731 PXIPXPRXFXLKXSXTPXPPXGKXPXSXP-----PXXPPXVPPSPXXXP 862
P P PR S P PP + P + P P PP PPSP P
Sbjct: 123 PPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRP 171
Score = 28.7 bits (61), Expect = 6.5
Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 3/47 (6%)
Frame = +2
Query: 737 IPXPRXFXLKXSXTPXPPXGK---XPXSXPPXXPPXVPPSPXXXPXP 868
+P P+ + S P PP K S PP PP VP +P P
Sbjct: 110 VPAPQHGDHEASPPPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPP 156
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 33.9 bits (74), Expect = 0.17
Identities = 16/47 (34%), Positives = 17/47 (36%)
Frame = +2
Query: 710 PXCPPXCPXIPXPRXFXLKXSXTPXPPXGKXPXSXPPXXPPXVPPSP 850
P PP P P+ T PP P PP PP PP P
Sbjct: 324 PPPPPPMKLDPSPQPAATPVEITEIPPIISPPAPPPPPPPPPPPPPP 370
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 33.1 bits (72), Expect = 0.30
Identities = 16/48 (33%), Positives = 19/48 (39%)
Frame = +2
Query: 719 PPXCPXIPXPRXFXLKXSXTPXPPXGKXPXSXPPXXPPXVPPSPXXXP 862
PP P P + S +P PP P + P PP PP P P
Sbjct: 476 PPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPPPPPPP 523
Score = 28.7 bits (61), Expect = 6.5
Identities = 21/69 (30%), Positives = 23/69 (33%), Gaps = 1/69 (1%)
Frame = +2
Query: 719 PPXCPX-IPXPRXFXLKXSXTPXPPXGKXPXSXPPXXPPXVPPSPXXXPXPLFXGXXPXA 895
PP P P P S +P P PP PP PS P P P
Sbjct: 466 PPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPPPPPPPAL 525
Query: 896 EFTPITGXP 922
E I+G P
Sbjct: 526 E-QEISGPP 533
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 32.7 bits (71), Expect = 0.40
Identities = 18/66 (27%), Positives = 21/66 (31%)
Frame = +2
Query: 710 PXCPPXCPXIPXPRXFXLKXSXTPXPPXGKXPXSXPPXXPPXVPPSPXXXPXPLFXGXXP 889
P CPP P + P P P PP PP PP P P+ P
Sbjct: 28 PPCPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPPM-PSYSP 86
Query: 890 XAEFTP 907
+ P
Sbjct: 87 CQSYAP 92
Score = 32.3 bits (70), Expect = 0.53
Identities = 18/51 (35%), Positives = 19/51 (37%)
Frame = +2
Query: 719 PPXCPXIPXPRXFXLKXSXTPXPPXGKXPXSXPPXXPPXVPPSPXXXPXPL 871
PP CP P P P PP P P PP PP P P P+
Sbjct: 27 PPPCPPPPPP---MCAPPPLPCPPPPICPPQFCP-PPPMCPPPPPPPPPPM 73
Score = 30.7 bits (66), Expect = 1.6
Identities = 21/61 (34%), Positives = 22/61 (36%), Gaps = 6/61 (9%)
Frame = +2
Query: 710 PXCPPX---CPXIPX-PRXFXLKXSXTPXPPXGKXPXSXPPXXPPXVPPSPXXX--PXPL 871
P C P CP P P F P PP P PP PP SP P P+
Sbjct: 36 PMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPPMPSYSPCQSYAPAPV 95
Query: 872 F 874
F
Sbjct: 96 F 96
>AL033514-24|CAA22108.1| 2121|Caenorhabditis elegans Hypothetical
protein Y75B8A.24 protein.
Length = 2121
Score = 32.7 bits (71), Expect = 0.40
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 61 LANPTPSWLSLCSPTWSWVKLERPPGHQVIL 153
L N T S +SLC+ W+W+ RP H + L
Sbjct: 1177 LLNFTESTVSLCTMAWNWLLSARPEAHSLFL 1207
>Z19158-2|CAA79571.3| 262|Caenorhabditis elegans Hypothetical
protein T23G5.3 protein.
Length = 262
Score = 32.3 bits (70), Expect = 0.53
Identities = 13/42 (30%), Positives = 15/42 (35%)
Frame = +2
Query: 716 CPPXCPXIPXPRXFXLKXSXTPXPPXGKXPXSXPPXXPPXVP 841
CPP P P P + P P PP PP +P
Sbjct: 109 CPPELPSTPIPNQILTQKENVPIVPRNLLLSKPPPPPPPPLP 150
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 32.3 bits (70), Expect = 0.53
Identities = 17/57 (29%), Positives = 23/57 (40%), Gaps = 2/57 (3%)
Frame = +2
Query: 764 KXSXTPXPPXGKXPXSXPPXXP--PXVPPSPXXXPXPLFXGXXPXAEFTPITGXPLF 928
+ + +P P P S PP P P PP P P P+ P + G PL+
Sbjct: 68 RPTESPPLPPPPLPLSNPPAKPTPPPPPPKPTIRPPPIPASPPPRPPASEPVGIPLY 124
Score = 28.3 bits (60), Expect = 8.6
Identities = 26/109 (23%), Positives = 37/109 (33%), Gaps = 3/109 (2%)
Frame = +2
Query: 596 GIXXSRXSGGNPGKKXGXXGEKNXXXXGKXNALKRNFX-PXCPPXCPXIPXPRXFXLKXS 772
GI + SG N + K+ + ++ ++ P P P P P
Sbjct: 30 GIYGVQESGQNSSRSSVYSSSKSTVIEVEQSSRQQQVGRPTESPPLPPPPLPLSNP-PAK 88
Query: 773 XTPXPPXGKXPXSXPPXX--PPXVPPSPXXXPXPLFXGXXPXAEFTPIT 913
TP PP K PP PP PP+ PL+ + P T
Sbjct: 89 PTPPPPPPKPTIRPPPIPASPPPRPPASEPVGIPLYSEKQHQQQLRPTT 137
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 32.3 bits (70), Expect = 0.53
Identities = 17/57 (29%), Positives = 23/57 (40%), Gaps = 2/57 (3%)
Frame = +2
Query: 764 KXSXTPXPPXGKXPXSXPPXXP--PXVPPSPXXXPXPLFXGXXPXAEFTPITGXPLF 928
+ + +P P P S PP P P PP P P P+ P + G PL+
Sbjct: 290 RPTESPPLPPPPLPLSNPPAKPTPPPPPPKPTIRPPPIPASPPPRPPASEPVGIPLY 346
Score = 28.3 bits (60), Expect = 8.6
Identities = 26/109 (23%), Positives = 37/109 (33%), Gaps = 3/109 (2%)
Frame = +2
Query: 596 GIXXSRXSGGNPGKKXGXXGEKNXXXXGKXNALKRNFX-PXCPPXCPXIPXPRXFXLKXS 772
GI + SG N + K+ + ++ ++ P P P P P
Sbjct: 252 GIYGVQESGQNSSRSSVYSSSKSTVIEVEQSSRQQQVGRPTESPPLPPPPLPLSNP-PAK 310
Query: 773 XTPXPPXGKXPXSXPPXX--PPXVPPSPXXXPXPLFXGXXPXAEFTPIT 913
TP PP K PP PP PP+ PL+ + P T
Sbjct: 311 PTPPPPPPKPTIRPPPIPASPPPRPPASEPVGIPLYSEKQHQQQLRPTT 359
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.9 bits (69), Expect = 0.70
Identities = 19/67 (28%), Positives = 22/67 (32%), Gaps = 1/67 (1%)
Frame = +2
Query: 710 PXCPPXCPXI-PXPRXFXLKXSXTPXPPXGKXPXSXPPXXPPXVPPSPXXXPXPLFXGXX 886
P PP P + P P TP PP PP PP +P P
Sbjct: 261 PPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPP 320
Query: 887 PXAEFTP 907
P + F P
Sbjct: 321 PPSRFGP 327
Score = 28.7 bits (61), Expect = 6.5
Identities = 19/60 (31%), Positives = 21/60 (35%)
Frame = +2
Query: 710 PXCPPXCPXIPXPRXFXLKXSXTPXPPXGKXPXSXPPXXPPXVPPSPXXXPXPLFXGXXP 889
P P P P P + P PP G+ P PP P PP P P G P
Sbjct: 278 PPTPGMTPRPPPPPSSGM-WPPPPPPPPGRTPG--PPGMPGMPPPPPPSRFGPPGMGGMP 334
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.9 bits (69), Expect = 0.70
Identities = 19/67 (28%), Positives = 22/67 (32%), Gaps = 1/67 (1%)
Frame = +2
Query: 710 PXCPPXCPXI-PXPRXFXLKXSXTPXPPXGKXPXSXPPXXPPXVPPSPXXXPXPLFXGXX 886
P PP P + P P TP PP PP PP +P P
Sbjct: 271 PPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPP 330
Query: 887 PXAEFTP 907
P + F P
Sbjct: 331 PPSRFGP 337
Score = 28.7 bits (61), Expect = 6.5
Identities = 19/60 (31%), Positives = 21/60 (35%)
Frame = +2
Query: 710 PXCPPXCPXIPXPRXFXLKXSXTPXPPXGKXPXSXPPXXPPXVPPSPXXXPXPLFXGXXP 889
P P P P P + P PP G+ P PP P PP P P G P
Sbjct: 288 PPTPGMTPRPPPPPSSGM-WPPPPPPPPGRTPG--PPGMPGMPPPPPPSRFGPPGMGGMP 344
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 31.5 bits (68), Expect = 0.93
Identities = 15/44 (34%), Positives = 18/44 (40%)
Frame = +2
Query: 719 PPXCPXIPXPRXFXLKXSXTPXPPXGKXPXSXPPXXPPXVPPSP 850
PP P P + S +P PP P + P PP PP P
Sbjct: 469 PPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPPP 512
>AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical
protein W08E12.6 protein.
Length = 215
Score = 31.5 bits (68), Expect = 0.93
Identities = 23/71 (32%), Positives = 24/71 (33%), Gaps = 3/71 (4%)
Frame = +2
Query: 704 FXPXCPPXCPXIPXPRXFXLKXSXTPXPPXGKXPXSXPP-XXPPXVPPSP--XXXPXPLF 874
F P CPP C P L PP P PP P PP+P P P F
Sbjct: 63 FGPACPPPC---FGPACVPLAPIIVNGPPPCFGPACPPPCFGPACAPPAPIIVNGPPPCF 119
Query: 875 XGXXPXAEFTP 907
P F P
Sbjct: 120 GPACPPPCFGP 130
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/53 (30%), Positives = 17/53 (32%)
Frame = +2
Query: 710 PXCPPXCPXIPXPRXFXLKXSXTPXPPXGKXPXSXPPXXPPXVPPSPXXXPXP 868
P C P P P + P PP PP P PP P P P
Sbjct: 33 PMCQPRMPCAA-PMPMPMPMPVCPPPPPCPAQFCPPPPICPPPPPPPMPCPPP 84
Score = 30.7 bits (66), Expect = 1.6
Identities = 23/73 (31%), Positives = 26/73 (35%), Gaps = 1/73 (1%)
Frame = +2
Query: 710 PXCPPXCPXIPXPRXFXLKXSXTPXPPXGKXPXSXPPXXPPXVPPS-PXXXPXPLFXGXX 886
P CPP P P P F P PP P PP PP PS P P F
Sbjct: 52 PVCPPP-P--PCPAQFCPPPPICPPPPP--PPMPCPPPPPPMPRPSCPCMMQRPSFYPSY 106
Query: 887 PXAEFTPITGXPL 925
+ P+ P+
Sbjct: 107 VPQYYQPMMPQPM 119
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.5 bits (63), Expect = 3.7
Identities = 23/70 (32%), Positives = 23/70 (32%), Gaps = 8/70 (11%)
Frame = +2
Query: 710 PXCPPXCPXIPXPRXFXLKXSXT---PXPPXGKXP-----XSXPPXXPPXVPPSPXXXPX 865
P PP P PR T P PP G P S PP PP P P
Sbjct: 255 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 314
Query: 866 PLFXGXXPXA 895
P G P A
Sbjct: 315 PQAGGSPPPA 324
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.5 bits (63), Expect = 3.7
Identities = 23/70 (32%), Positives = 23/70 (32%), Gaps = 8/70 (11%)
Frame = +2
Query: 710 PXCPPXCPXIPXPRXFXLKXSXT---PXPPXGKXP-----XSXPPXXPPXVPPSPXXXPX 865
P PP P PR T P PP G P S PP PP P P
Sbjct: 276 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 335
Query: 866 PLFXGXXPXA 895
P G P A
Sbjct: 336 PQAGGSPPPA 345
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.5 bits (63), Expect = 3.7
Identities = 23/70 (32%), Positives = 23/70 (32%), Gaps = 8/70 (11%)
Frame = +2
Query: 710 PXCPPXCPXIPXPRXFXLKXSXT---PXPPXGKXP-----XSXPPXXPPXVPPSPXXXPX 865
P PP P PR T P PP G P S PP PP P P
Sbjct: 261 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 320
Query: 866 PLFXGXXPXA 895
P G P A
Sbjct: 321 PQAGGSPPPA 330
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 29.1 bits (62), Expect = 4.9
Identities = 19/56 (33%), Positives = 19/56 (33%), Gaps = 2/56 (3%)
Frame = +2
Query: 710 PXCPPXCPXIPXPRXFXLKXSXTPXPPXGKXPXSXPPXXP--PXVPPSPXXXPXPL 871
P C P P P P S P P PP P P PP P P PL
Sbjct: 78 PSCCPYVPPAPLPPP-PPPASPCCGPSPVPAPCCPPPPAPAAPCCPPPPPPTPSPL 132
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.1 bits (62), Expect = 4.9
Identities = 16/41 (39%), Positives = 16/41 (39%), Gaps = 4/41 (9%)
Frame = +2
Query: 779 PXPPXGKXPXS----XPPXXPPXVPPSPXXXPXPLFXGXXP 889
P PP G P S PP P PP P P F G P
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 785
Score = 28.7 bits (61), Expect = 6.5
Identities = 21/67 (31%), Positives = 24/67 (35%), Gaps = 3/67 (4%)
Frame = +2
Query: 731 PXIPXPRXFXLKXSXTPXPPXGKX---PXSXPPXXPPXVPPSPXXXPXPLFXGXXPXAEF 901
P IP P + S G P + P PP +PP P P G P
Sbjct: 681 PKIPLPPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLP---- 736
Query: 902 TPITGXP 922
PITG P
Sbjct: 737 -PITGGP 742
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.1 bits (62), Expect = 4.9
Identities = 16/41 (39%), Positives = 16/41 (39%), Gaps = 4/41 (9%)
Frame = +2
Query: 779 PXPPXGKXPXS----XPPXXPPXVPPSPXXXPXPLFXGXXP 889
P PP G P S PP P PP P P F G P
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 785
Score = 28.7 bits (61), Expect = 6.5
Identities = 21/67 (31%), Positives = 24/67 (35%), Gaps = 3/67 (4%)
Frame = +2
Query: 731 PXIPXPRXFXLKXSXTPXPPXGKX---PXSXPPXXPPXVPPSPXXXPXPLFXGXXPXAEF 901
P IP P + S G P + P PP +PP P P G P
Sbjct: 681 PKIPLPPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLP---- 736
Query: 902 TPITGXP 922
PITG P
Sbjct: 737 -PITGGP 742
>AF101312-1|AAC69221.3| 813|Caenorhabditis elegans Hypothetical
protein F56E10.2 protein.
Length = 813
Score = 29.1 bits (62), Expect = 4.9
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +2
Query: 803 PXSXPPXXPPXVPPSPXXXPXPL 871
P PP PP PP+P P P+
Sbjct: 316 PCPSPPLLPPVCPPAPPPPPPPI 338
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.1 bits (62), Expect = 4.9
Identities = 16/41 (39%), Positives = 16/41 (39%), Gaps = 4/41 (9%)
Frame = +2
Query: 779 PXPPXGKXPXS----XPPXXPPXVPPSPXXXPXPLFXGXXP 889
P PP G P S PP P PP P P F G P
Sbjct: 328 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 368
Score = 28.7 bits (61), Expect = 6.5
Identities = 21/67 (31%), Positives = 24/67 (35%), Gaps = 3/67 (4%)
Frame = +2
Query: 731 PXIPXPRXFXLKXSXTPXPPXGKX---PXSXPPXXPPXVPPSPXXXPXPLFXGXXPXAEF 901
P IP P + S G P + P PP +PP P P G P
Sbjct: 264 PKIPLPPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLP---- 319
Query: 902 TPITGXP 922
PITG P
Sbjct: 320 -PITGGP 325
>AC006708-23|AAF60414.1| 975|Caenorhabditis elegans Paz/piwi
domain-containing protein2 protein.
Length = 975
Score = 29.1 bits (62), Expect = 4.9
Identities = 13/26 (50%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
Frame = +2
Query: 779 PXPPXGKXPXSXPP--XXPPXVPPSP 850
P PP G P + PP PP VPP P
Sbjct: 13 PVPPVGFPPVTAPPGLHPPPPVPPVP 38
>U97196-12|AAB52456.2| 564|Caenorhabditis elegans Hypothetical
protein B0207.1 protein.
Length = 564
Score = 28.7 bits (61), Expect = 6.5
Identities = 21/84 (25%), Positives = 25/84 (29%), Gaps = 4/84 (4%)
Frame = +2
Query: 686 NALKRNFXPXCPPXCPXIPXPRXFXLKXSXTPXPPXGKXPXSXP----PXXPPXVPPSPX 853
N L P P + P +K P PP P P PP PP P
Sbjct: 69 NKLSTGLPPMTMMLPPTVQEPLPTPVKTPPLPRPPGNLNPVQQPQIPVQRTPPQCPPPPV 128
Query: 854 XXPXPLFXGXXPXAEFTPITGXPL 925
P P P +P P+
Sbjct: 129 PHP-PQITQMAPILPTSPAPPPPI 151
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 28.7 bits (61), Expect = 6.5
Identities = 20/68 (29%), Positives = 23/68 (33%), Gaps = 8/68 (11%)
Frame = +2
Query: 710 PXCPPXCPXIPXPRXFXLKX--SXTPXPPXGKXPXSXP------PXXPPXVPPSPXXXPX 865
P P P P P+ F + S P PP P P P PP PPS P
Sbjct: 605 PHAVPPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGGPA 664
Query: 866 PLFXGXXP 889
+ P
Sbjct: 665 SVLAKLPP 672
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 28.7 bits (61), Expect = 6.5
Identities = 20/68 (29%), Positives = 23/68 (33%), Gaps = 8/68 (11%)
Frame = +2
Query: 710 PXCPPXCPXIPXPRXFXLKX--SXTPXPPXGKXPXSXP------PXXPPXVPPSPXXXPX 865
P P P P P+ F + S P PP P P P PP PPS P
Sbjct: 431 PHAVPPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGGPA 490
Query: 866 PLFXGXXP 889
+ P
Sbjct: 491 SVLAKLPP 498
>AL132949-22|CAB70112.2| 603|Caenorhabditis elegans Hypothetical
protein Y53F4B.25 protein.
Length = 603
Score = 28.7 bits (61), Expect = 6.5
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = +2
Query: 746 PRXFXLKXSXTPXPPXGKXPXSXPPXXPPXVPPSPXXXP 862
P+ F + TP P + P PP PP VPP P P
Sbjct: 437 PKMFNFTTNPTPPP---RLPQ--PPTAPPTVPPPPNQAP 470
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.3 bits (60), Expect = 8.6
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = +2
Query: 809 SXPPXXPPXVPPSPXXXPXPLFXGXXPXAEFTPITGXPL 925
S PP PP PPS P P P P TG PL
Sbjct: 1337 SPPPPPPPPPPPSDDLTPVPPPPPPPPTMSKAP-TGVPL 1374
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,258,403
Number of Sequences: 27780
Number of extensions: 189964
Number of successful extensions: 1243
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 604
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 969
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2496624284
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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