Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_C12
(903 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 36 0.008
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 33 0.073
SPAC1952.03 |||cysteine protease, OTU family|Schizosaccharomyces... 32 0.097
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 32 0.097
SPBC947.12 |kms2||spindle pole body protein Kms2|Schizosaccharom... 32 0.13
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 32 0.13
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 32 0.13
SPAC688.11 |end4|sla2|Huntingtin-interacting protein homolog|Sch... 31 0.17
SPBC365.11 |||GRIP domain protein|Schizosaccharomyces pombe|chr ... 30 0.39
SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 30 0.39
SPBC11C11.08 |srp1||SR family protein Srp1|Schizosaccharomyces p... 30 0.39
SPBC6B1.04 |mde4||monopolin-like complex subunit Mde4|Schizosacc... 30 0.52
SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyc... 29 0.90
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 29 0.90
SPCC18B5.07c |nup61||nucleoporin Nup61|Schizosaccharomyces pombe... 29 1.2
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 29 1.2
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 28 1.6
SPAC2F3.15 |lsk1||latrunculin sensitive kinase Lsk1 |Schizosacch... 28 1.6
SPCC162.06c |||vacuolar sorting protein Vps60|Schizosaccharomyce... 28 2.1
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 28 2.1
SPCC757.09c |rnc1||RNA-binding protein that suppresses calcineur... 27 2.8
SPBC19G7.16 |iws1||transcription elongation factor complex subun... 27 3.6
SPBC1347.04 |tim54||TIM22 inner membrane protein import complex ... 27 4.8
SPAC6F6.17 |rif1|tap1, tap11, SPAPJ736.01|telomere length regula... 26 6.4
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 26 6.4
SPBC29A10.12 |||HMG-box variant|Schizosaccharomyces pombe|chr 2|... 26 6.4
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 26 6.4
SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 8.4
SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|ch... 26 8.4
SPAC4F10.17 |||conserved fungal protein|Schizosaccharomyces pomb... 26 8.4
SPAC17G6.08 |pep7|vac1|prevacuole/endosomal FYVE tethering compo... 26 8.4
SPAC20G8.10c ||SPAC3A12.01c|beclin family protein|Schizosaccharo... 26 8.4
SPBC1709.02c |vas2|SPBC1734.18c|valine-tRNA ligase Vas2 |Schizos... 26 8.4
SPBC16G5.11c |bag101|bag1-a, bag1|BAG family molecular chaperone... 26 8.4
SPBC947.07 |||ribosome biogenesis protein Rrp14-C|Schizosaccharo... 26 8.4
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 35.9 bits (79), Expect = 0.008
Identities = 24/95 (25%), Positives = 45/95 (47%)
Frame = +1
Query: 94 GS*KNKTTKMDAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKKIQ 273
GS K+ T ++++M +K E + + Q DA + E+E + L+ I
Sbjct: 357 GSLKDSRTSNSQLEEEMVELK-ESNRTI------HSQLTDAESKLSSFEQENKSLKGSID 409
Query: 274 TIENELDQTQESLMQVNGKLEEKEKALQNAESEVA 378
+N L + + QV+ +LEE +L +A ++A
Sbjct: 410 EYQNNLSSKDKMVKQVSSQLEEARSSLAHATGKLA 444
Score = 31.9 bits (69), Expect = 0.13
Identities = 24/102 (23%), Positives = 46/102 (45%), Gaps = 10/102 (9%)
Frame = +1
Query: 106 NKTTKMDAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEK---AEEEARQLQKKIQT 276
N ++ ++ K+ A LE +N + + KD N + +EE+ QKK+
Sbjct: 134 NLLNELKQVRSKLAA--LEHENGILSLQLSSSNKKDKNTSSVTTLTSEEDVSYFQKKLTN 191
Query: 277 IENELDQTQ-------ESLMQVNGKLEEKEKALQNAESEVAA 381
+E+ Q L+ V KL++KEK + + +V++
Sbjct: 192 MESNFSAKQSEAYDLSRQLLTVTEKLDKKEKDYEKIKEDVSS 233
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 32.7 bits (71), Expect = 0.073
Identities = 18/76 (23%), Positives = 41/76 (53%)
Frame = +1
Query: 145 QAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKKIQTIENELDQTQESLMQVN 324
+++ LEK N L+++ + +++KD + +E + LQ+++ + + E+ L N
Sbjct: 718 RSLALEKLNDLEKSLVLSERSKD------ELDESYKSLQEQLASKKIEVQNVSSQLSICN 771
Query: 325 GKLEEKEKALQNAESE 372
+LE+ + N +SE
Sbjct: 772 SQLEQSNHIVDNLKSE 787
Score = 32.7 bits (71), Expect = 0.073
Identities = 20/91 (21%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
Frame = +1
Query: 106 NKTTKMDAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKKIQTIEN 285
+K + +A++K+++++K + A+ +Q K+E+E + +K++ +N
Sbjct: 1448 SKNAENEAMQKEIESLKDSNHQLQESASSDAEQITKEQFEQLKSEKE--RTEKELADSKN 1505
Query: 286 ELDQTQESLMQVNGKLE--EKEKALQNAESE 372
EL+ Q + +GK E EK + S+
Sbjct: 1506 ELEHLQSEAVDADGKTEISNLEKEIHELRSD 1536
Score = 28.3 bits (60), Expect = 1.6
Identities = 18/51 (35%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Frame = +1
Query: 163 KDNALDRAAMCEQQAKDAN--LRAEKAEEEARQLQKKIQTIENELDQTQES 309
K ++L R A +Q+ + N L ++ AE EA +QK+I+++++ Q QES
Sbjct: 1425 KKSSLTRFAHLKQELTNKNKELTSKNAENEA--MQKEIESLKDSNHQLQES 1473
Score = 26.6 bits (56), Expect = 4.8
Identities = 15/62 (24%), Positives = 30/62 (48%)
Frame = +1
Query: 157 LEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKKIQTIENELDQTQESLMQVNGKLE 336
LEKD + + QQ ++NLR + E +++K+ + + ++ S Q++
Sbjct: 243 LEKDALQRKVSSLSQQFTESNLRYQNIVAELSEMRKQYEFSQVSFEKEISSQKQISELWM 302
Query: 337 EK 342
EK
Sbjct: 303 EK 304
>SPAC1952.03 |||cysteine protease, OTU family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 324
Score = 32.3 bits (70), Expect = 0.097
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Frame = +1
Query: 133 KKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAE---EEARQLQKKIQTIENELDQTQ 303
++K ++ K+E+ + R E Q+K NLR + E ++ R LQ+KI +E +L Q
Sbjct: 17 QQKRKSKKMEELLSKQREECKELQSKITNLRKQLKEGNKKQKRALQQKISQMEADLSQKH 76
Query: 304 ESLMQVNGKLEEKEKALQNAE 366
+ Q K +E+ Q +
Sbjct: 77 ATERQKLDKGDEETNETQQED 97
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 32.3 bits (70), Expect = 0.097
Identities = 18/70 (25%), Positives = 37/70 (52%)
Frame = +1
Query: 166 DNALDRAAMCEQQAKDANLRAEKAEEEARQLQKKIQTIENELDQTQESLMQVNGKLEEKE 345
D+ A E+ + A+ E+ +EE R+L++KI++ + L+ Q S + ++E+K+
Sbjct: 584 DDQQTTEAPFEEPDEPAHEPTEEEQEEMRKLEEKIESTKYGLETIQTSGKTIKQRIEQKK 643
Query: 346 KALQNAESEV 375
L E+
Sbjct: 644 TRLMILREEL 653
>SPBC947.12 |kms2||spindle pole body protein
Kms2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 457
Score = 31.9 bits (69), Expect = 0.13
Identities = 16/82 (19%), Positives = 40/82 (48%)
Frame = +1
Query: 103 KNKTTKMDAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKKIQTIE 282
++K ++ + + + E D++ + C QAK + +A ++++ ++QTI
Sbjct: 185 RSKDEQVKELNARNAKLLEELDSSEEACKSCYTQAKTWEKKFREALRDSKEYAAQLQTIH 244
Query: 283 NELDQTQESLMQVNGKLEEKEK 348
E +Q Q ++++ + EK
Sbjct: 245 EEYEQQQAHIVRMEELIHAVEK 266
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 31.9 bits (69), Expect = 0.13
Identities = 21/92 (22%), Positives = 48/92 (52%), Gaps = 7/92 (7%)
Frame = +1
Query: 103 KNKTTKMDAIKKKMQAMKLEKDN-----ALDRAAMCEQQAKDANL--RAEKAEEEARQLQ 261
KN +++++ K K +++ E++ A R+++ + N+ + + +E R+L+
Sbjct: 590 KNLESELNSSKIKNESLLNERNLLKEMLATSRSSILSHNSSAGNIDDKMKSIDESTRELE 649
Query: 262 KKIQTIENELDQTQESLMQVNGKLEEKEKALQ 357
K + NE+ QESL + N L + +A++
Sbjct: 650 KNYEVYRNEMTAIQESLSKRNQDLLSEMEAIR 681
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 31.9 bits (69), Expect = 0.13
Identities = 18/90 (20%), Positives = 45/90 (50%)
Frame = +1
Query: 112 TTKMDAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKKIQTIENEL 291
T ++ ++ ++ ++ EKD+ + + +D + + E E RQLQ ++ + EL
Sbjct: 248 TERIRFLENALEKVQREKDS------LSTEMEEDKSNKEVDYEYEIRQLQNRLDELSEEL 301
Query: 292 DQTQESLMQVNGKLEEKEKALQNAESEVAA 381
D Q+ L + ++ ++ ++ E+ +A
Sbjct: 302 DVAQDLLTEKEDEIATLKRQIEEKENSSSA 331
>SPAC688.11 |end4|sla2|Huntingtin-interacting protein
homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1092
Score = 31.5 bits (68), Expect = 0.17
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = +1
Query: 136 KKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKKIQTIENELDQTQESLM 315
K++Q A+D+ E++ K+ NL E + + +++T+ QES
Sbjct: 503 KQIQLKASSAQEAIDKKEKMEREMKNKNLELADMILERDRARHELETMHRSQRDKQESTE 562
Query: 316 QVNGKLEEKEKALQ-NAESEVA 378
+ L+EK +L+ N SEV+
Sbjct: 563 RELRLLQEKAASLERNKSSEVS 584
Score = 29.5 bits (63), Expect = 0.68
Identities = 25/117 (21%), Positives = 45/117 (38%), Gaps = 4/117 (3%)
Frame = +1
Query: 187 AMCEQQAKDANLRAEKAEEEARQLQKKIQTIENELDQT----QESLMQVNGKLEEKEKAL 354
A EQQ + E++ Q +++T+ENEL Q QE + Q + +E + +
Sbjct: 415 AELEQQLLATRGQLEQSNVLLNQYDARVRTLENELSQAGVNLQEQIHQNDDLIESLKNQI 474
Query: 355 QNAESEVAAXXXXXXXXXXXXXXXXXXXATATAKLSEASQAADDSERARXVXENRSL 525
+++ A K S A +A D E+ +N++L
Sbjct: 475 LTWKNKYEALAKLYTQLRQEHLDLLSKYKQIQLKASSAQEAIDKKEKMEREMKNKNL 531
>SPBC365.11 |||GRIP domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 266
Score = 30.3 bits (65), Expect = 0.39
Identities = 12/50 (24%), Positives = 34/50 (68%)
Frame = +1
Query: 232 KAEEEARQLQKKIQTIENELDQTQESLMQVNGKLEEKEKALQNAESEVAA 381
K +EE LQ ++ + NEL ++++ + ++ K + +++++++ ESE+++
Sbjct: 141 KLKEENENLQDMLRNVGNELVESRDEIKELIEKQKVQKESVKSHESELSS 190
Score = 27.5 bits (58), Expect = 2.8
Identities = 15/78 (19%), Positives = 38/78 (48%)
Frame = +1
Query: 115 TKMDAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKKIQTIENELD 294
TK A KKK + K +K+N + ++ + ++++ + L +K++ +EN
Sbjct: 32 TKPPASKKKRKNRKKKKNNGPSEQFVGNNDLEEQRSGSIDSKDKEKPLDEKVKELENANK 91
Query: 295 QTQESLMQVNGKLEEKEK 348
+ + ++ + +E E+
Sbjct: 92 TLSDLVRRIQIQRDEAEQ 109
>SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 345
Score = 30.3 bits (65), Expect = 0.39
Identities = 17/80 (21%), Positives = 36/80 (45%)
Frame = +1
Query: 133 KKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKKIQTIENELDQTQESL 312
+KK + ++ K+N L+ + Q + + + A++ QK + E ++ E
Sbjct: 96 RKKRKELESAKNNLLNVYDSLKMQKASVSSMVNRKQRAAKEEQKIQEEFERQITDLLEEQ 155
Query: 313 MQVNGKLEEKEKALQNAESE 372
Q+ ++E E + A SE
Sbjct: 156 QQLKLEIERLEAETERANSE 175
>SPBC11C11.08 |srp1||SR family protein Srp1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 275
Score = 30.3 bits (65), Expect = 0.39
Identities = 19/43 (44%), Positives = 22/43 (51%)
Frame = -3
Query: 538 APXPPTTCSRAPYVRARSHRRPGWPRTAWRWRSRDAPRTSRGP 410
+P P SR+PY RS RR PR +R RSR SR P
Sbjct: 117 SPSPHEARSRSPYNDERSDRRSMSPR--YRSRSRSPDGRSRSP 157
>SPBC6B1.04 |mde4||monopolin-like complex subunit
Mde4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 421
Score = 29.9 bits (64), Expect = 0.52
Identities = 17/72 (23%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Frame = +1
Query: 103 KNKTTKMDAIKKKMQAMKLEKDNALDRAAMCEQQAKDAN---LRAEKAEEEARQLQKKIQ 273
K T + + K + +K ++ L+ + EQ+ +AN L+ E+ E + ++I
Sbjct: 54 KQSATDSELLHKNLDEIKFLQNEKLNNEKLLEQEQNEANDYRLKVERLEHKISDYVQEIN 113
Query: 274 TIENELDQTQES 309
++ ++L Q Q+S
Sbjct: 114 SLNSQL-QIQKS 124
>SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 29.1 bits (62), Expect = 0.90
Identities = 18/93 (19%), Positives = 43/93 (46%), Gaps = 3/93 (3%)
Frame = +1
Query: 106 NKTTKMDAIKKKMQAMKLEKDNALDRAAMCEQQAKD---ANLRAEKAEEEARQLQKKIQT 276
N T K + + K D ++ +C++QA+ +L + + E+ + + K Q
Sbjct: 452 NATRKKNGVYLAESTYKELMDRVQNKDLLCQEQARKLEVLDLNVKSSREQLQYVSKSNQE 511
Query: 277 IENELDQTQESLMQVNGKLEEKEKALQNAESEV 375
+ E++ Q L+ + +LE + + ++E+
Sbjct: 512 HKKEVEALQLQLVNSSTELESVKSENEKLKNEL 544
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 29.1 bits (62), Expect = 0.90
Identities = 22/84 (26%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = +1
Query: 124 DAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEK-AEEEARQLQKKIQTIENELDQT 300
+A +K + +LE + R A EQ ++A +A++ AEE+A+ ++ + + E ++
Sbjct: 544 EAKRKAEEKARLEAEENAKREAE-EQAKREAEEKAKREAEEKAK--REAEEKAKREAEEN 600
Query: 301 QESLMQVNGKLEEKEKALQNAESE 372
+ + K E +EKA + AE +
Sbjct: 601 AKREAEEKAKREAEEKAKREAEEK 624
Score = 26.2 bits (55), Expect = 6.4
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +1
Query: 229 EKAEEEARQLQKKIQTIENELDQTQESLMQVNGKLEEKEKALQNAESE 372
EKAE EA++ ++ +E E + +E+ + K E +EKA + AE +
Sbjct: 539 EKAEAEAKRKAEEKARLEAEENAKREA--EEQAKREAEEKAKREAEEK 584
>SPCC18B5.07c |nup61||nucleoporin Nup61|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 565
Score = 28.7 bits (61), Expect = 1.2
Identities = 17/56 (30%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Frame = +1
Query: 214 ANLRAEKAEEEARQLQKKIQTIENELDQTQ--ESLMQVNGKLEEKEKALQNAESEV 375
A++ AEK+EE + + + + EN D+T+ +SL+ GK EE E ++ +++
Sbjct: 407 ASVGAEKSEETSNGNKSEQEEKENGNDETRSNDSLVSGKGKGEENEDSVFETRAKI 462
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 28.7 bits (61), Expect = 1.2
Identities = 18/84 (21%), Positives = 39/84 (46%)
Frame = +1
Query: 124 DAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKKIQTIENELDQTQ 303
+A+ ++ ++++ + + ++ AEK EE Q+K+ + ELD T+
Sbjct: 620 EALDLSVKERSIQEEKLNESLKTSKTNLEEQTQLAEKYHEELLDNQQKLYDLRIELDYTK 679
Query: 304 ESLMQVNGKLEEKEKALQNAESEV 375
+ Q+ EE + + ESE+
Sbjct: 680 SNCKQME---EEMQVLREGHESEI 700
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 28.3 bits (60), Expect = 1.6
Identities = 22/132 (16%), Positives = 53/132 (40%), Gaps = 2/132 (1%)
Frame = +1
Query: 103 KNKTTKMDAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEA--RQLQKKIQT 276
K K + + + + E ++ ++ E ++ + + ++EEE + +KK +
Sbjct: 78 KKKEESSSESESESSSSESESSSSESESSSSESESSSSESSSSESEEEVIVKTEEKKESS 137
Query: 277 IENELDQTQESLMQVNGKLEEKEKALQNAESEVAAXXXXXXXXXXXXXXXXXXXATATAK 456
E+ E + K+EEK+++ ++ SE ++ K
Sbjct: 138 SESSSSSESEEEEEAVVKIEEKKESSSDSSSESSSSESESESSSSESEEEEEVVEKTEEK 197
Query: 457 LSEASQAADDSE 492
+S+++ DSE
Sbjct: 198 KEGSSESSSDSE 209
>SPAC2F3.15 |lsk1||latrunculin sensitive kinase Lsk1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 593
Score = 28.3 bits (60), Expect = 1.6
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = -3
Query: 496 RARSHRRPGWPRTAWRWRSRDAPRTSRGPPPAVGYVGSGQPLRTQ 362
RAR H RP R + R + + A G PP+ + SG R +
Sbjct: 81 RARQHERPFRSRKSRRRKGKKAFSPRPGSPPSPSFYRSGSQKRAR 125
>SPCC162.06c |||vacuolar sorting protein Vps60|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 210
Score = 27.9 bits (59), Expect = 2.1
Identities = 20/74 (27%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Frame = +1
Query: 133 KKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKK-----IQTIENELDQ 297
+ ++Q ++ + N +++AAM + K+ + +E ARQL+ + I+ IE D+
Sbjct: 76 ESQLQQLQQQSFN-MEQAAMTTESLKNTMATVQTMQETARQLKSQSKNVSIEKIEKLQDE 134
Query: 298 TQESLMQVNGKLEE 339
Q+ M G+L E
Sbjct: 135 IQD-YMDAAGELNE 147
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 27.9 bits (59), Expect = 2.1
Identities = 13/62 (20%), Positives = 33/62 (53%)
Frame = +1
Query: 118 KMDAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKKIQTIENELDQ 297
K++ + ++ +KLE+ NA + KD + + + +EE + +I ++E ++D+
Sbjct: 3323 KLEPLNSEVDRLKLEQKNAEECIQETIAACKDLDEKLLQLQEEYASMISEIHSMELQMDE 3382
Query: 298 TQ 303
+
Sbjct: 3383 VK 3384
>SPCC757.09c |rnc1||RNA-binding protein that suppresses calcineurin
deletion Rnc1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 398
Score = 27.5 bits (58), Expect = 2.8
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +1
Query: 232 KAEEEARQLQKKIQTIENELDQTQESLMQVNGKLEEKEKAL 354
K E R KI + D+T E + + G EE EKAL
Sbjct: 342 KISEIRRTSGSKISIAKEPHDETGERMFTITGTHEENEKAL 382
>SPBC19G7.16 |iws1||transcription elongation factor complex subunit
Iws1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 428
Score = 27.1 bits (57), Expect = 3.6
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
Frame = +1
Query: 229 EKAEEEARQLQKKIQTIENE--LD---QTQESLMQVNGKLEEKEKALQNAESEVA 378
EKAE E Q++ + +T EN+ +D + V+ L+ KE+AL +E E++
Sbjct: 5 EKAELENMQVESEAKTSENDQTIDTKVDVADVTTHVDEDLDNKEEALDFSEDELS 59
>SPBC1347.04 |tim54||TIM22 inner membrane protein import complex
subunit Tim54|Schizosaccharomyces pombe|chr 2|||Manual
Length = 347
Score = 26.6 bits (56), Expect = 4.8
Identities = 19/73 (26%), Positives = 38/73 (52%)
Frame = +1
Query: 124 DAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKKIQTIENELDQTQ 303
D +K+K++ KLE +N ++ E++ KD + +K + + KKI +NE+D +
Sbjct: 168 DIMKRKLETEKLEANNKEEKE---EKEGKDD--KDDKEDSNDTKNDKKIS--KNEVDSSL 220
Query: 304 ESLMQVNGKLEEK 342
+ G++ K
Sbjct: 221 IEASPLTGQVPPK 233
>SPAC6F6.17 |rif1|tap1, tap11, SPAPJ736.01|telomere length regulator
protein Rif1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1400
Score = 26.2 bits (55), Expect = 6.4
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Frame = +1
Query: 154 KLEKDNALDRAAMCE----QQAKDANLRAEKAEEEARQLQKKIQTIENELDQTQESLMQV 321
K DN + A++ E + K + A K + + KKI +NE +ESL
Sbjct: 1088 KPNNDNYIQIASVQELDDSSKGKAGKMPASKKNKRQKGDVKKIDETKNEATDMEESLTTP 1147
Query: 322 NGKLEEK 342
+GK+ ++
Sbjct: 1148 SGKVNKE 1154
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 26.2 bits (55), Expect = 6.4
Identities = 17/64 (26%), Positives = 24/64 (37%)
Frame = -3
Query: 535 PXPPTTCSRAPYVRARSHRRPGWPRTAWRWRSRDAPRTSRGPPPAVGYVGSGQPLRTQRS 356
P + +AP + P P RD P T R P G + + QP++
Sbjct: 490 PTEQSNAQQAPSPKEEERPLPSEPSQNQPAEYRDTPDTPRNIMPLPGLMSADQPIKV--- 546
Query: 355 AEPS 344
EPS
Sbjct: 547 TEPS 550
>SPBC29A10.12 |||HMG-box variant|Schizosaccharomyces pombe|chr
2|||Manual
Length = 207
Score = 26.2 bits (55), Expect = 6.4
Identities = 17/76 (22%), Positives = 37/76 (48%)
Frame = +1
Query: 109 KTTKMDAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKKIQTIENE 288
K+ K D KKK A + EK + + EQ+A+ E+ E R +++++++ ++
Sbjct: 15 KSRKQDEEKKKKDAEEDEKWSKGVKTNKKEQEAEKRKAALERKAERERLEKEEMESLPSK 74
Query: 289 LDQTQESLMQVNGKLE 336
+ + + N L+
Sbjct: 75 GGKGSKKAAKKNSSLD 90
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 26.2 bits (55), Expect = 6.4
Identities = 17/89 (19%), Positives = 36/89 (40%), Gaps = 7/89 (7%)
Frame = +1
Query: 130 IKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKKIQTIE-------NE 288
++ A +E+ +D ++ + + K +++ +++Q + +E N+
Sbjct: 1978 LEASFAASDIERIKGIDECRNRDRTIRQLEAQISKFDDDKKRIQSSVSRLEERNAQLRNQ 2037
Query: 289 LDQTQESLMQVNGKLEEKEKALQNAESEV 375
L+ Q S Q L E ALQ V
Sbjct: 2038 LEDVQASETQWKFALRRTEHALQEERERV 2066
>SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 395
Score = 25.8 bits (54), Expect = 8.4
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +1
Query: 232 KAEEEARQLQKKIQTIENELDQTQESLMQVNGKLEEKEKALQN 360
K E + Q K+ ENE+++ + + L+++EK L+N
Sbjct: 200 KREAALEEFQSKLLIRENEINKRELKMNGKEDDLKKREKDLEN 242
>SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 161
Score = 25.8 bits (54), Expect = 8.4
Identities = 13/61 (21%), Positives = 27/61 (44%)
Frame = +1
Query: 166 DNALDRAAMCEQQAKDANLRAEKAEEEARQLQKKIQTIENELDQTQESLMQVNGKLEEKE 345
D ++ + +A RAE AE + ++++ ++ E E + +LEE E
Sbjct: 2 DKLREKINAARAETDEAVARAEAAEAKLKEVELQLSLKEQEYESLSRKSEAAESQLEELE 61
Query: 346 K 348
+
Sbjct: 62 E 62
>SPAC4F10.17 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 123
Score = 25.8 bits (54), Expect = 8.4
Identities = 14/60 (23%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Frame = +1
Query: 166 DNALDRAAMCEQQAKDANLRAEKAEEEARQLQKKI-QTIENELDQTQESLMQVNGKLEEK 342
+NA + AKD + + +KA++ ++++++ Q EN L++T+ M +G ++++
Sbjct: 65 ENAKQSVKQTAKDAKDTDYQ-QKAKDAGKKIKEEFSQRSENVLEETRREGMNRDGGVKKE 123
>SPAC17G6.08 |pep7|vac1|prevacuole/endosomal FYVE tethering
component Pep7 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 536
Score = 25.8 bits (54), Expect = 8.4
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +1
Query: 241 EEARQLQKKIQTIENELDQTQESLMQVNGKLEEKEKALQNAESEVAA 381
E R+L+KK + +E + QE LMQ LEE+ ++N + A
Sbjct: 458 ESERELEKKKEQVEKK----QEELMQTRIVLEEQVFLVENMIEDAKA 500
>SPAC20G8.10c ||SPAC3A12.01c|beclin family
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 464
Score = 25.8 bits (54), Expect = 8.4
Identities = 24/89 (26%), Positives = 47/89 (52%), Gaps = 6/89 (6%)
Frame = +1
Query: 124 DAIKKKMQAMKLEK------DNALDRAAMCEQQAKDANLRAEKAEEEARQLQKKIQTIEN 285
+ + K ++A+K EK DN L + E+ A L +E +E +Q+ +K + IE
Sbjct: 152 EEMSKTLRALKEEKKMYFNYDNFLSSQTVHEENT--AALDSE-IDELMKQINEKEEKIEE 208
Query: 286 ELDQTQESLMQVNGKLEEKEKALQNAESE 372
D+T + L ++ +L+E+++ + E E
Sbjct: 209 ISDET-DKLQKLLRELDEEKEKVYAEEQE 236
>SPBC1709.02c |vas2|SPBC1734.18c|valine-tRNA ligase Vas2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 980
Score = 25.8 bits (54), Expect = 8.4
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +1
Query: 154 KLEKDNALDRAAMCEQQAKDANLRAEKAEEEAR--QLQKK 267
K EK+ +R + + A L A+KA+EEAR +L KK
Sbjct: 25 KTEKELERERQKAAKLEKYHAKLAAKKAKEEARKPKLDKK 64
>SPBC16G5.11c |bag101|bag1-a, bag1|BAG family molecular chaperone
regulator|Schizosaccharomyces pombe|chr 2|||Manual
Length = 195
Score = 25.8 bits (54), Expect = 8.4
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +1
Query: 220 LRAEKAEEEARQLQKKIQTIENELDQTQESL 312
L +EK E +QL KIQ + + +DQT + +
Sbjct: 163 LGSEKLRFERKQLVSKIQKMLDHVDQTSQEV 193
>SPBC947.07 |||ribosome biogenesis protein
Rrp14-C|Schizosaccharomyces pombe|chr 2|||Manual
Length = 233
Score = 25.8 bits (54), Expect = 8.4
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +1
Query: 133 KKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQ 255
KK A K KDN +A + QQ ++ NL+ + +++++
Sbjct: 181 KKSSDAWKERKDNE-KKAMLMRQQRREENLKKRRESKKSKK 220
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,056,157
Number of Sequences: 5004
Number of extensions: 29023
Number of successful extensions: 178
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 151
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 175
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 456499320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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