Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_C10
         (905 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132865-1|CAB60595.1|  110|Caenorhabditis elegans Hypothetical ...    77   1e-14
U97194-7|AAB52450.2|  107|Caenorhabditis elegans Hypothetical pr...    75   9e-14
Z70752-5|CAA94758.1|  901|Caenorhabditis elegans Hypothetical pr...    32   0.65 
Z70750-16|CAA94750.1|  901|Caenorhabditis elegans Hypothetical p...    32   0.65 
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def...    30   2.6  
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def...    30   2.6  
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.    30   2.6  
U53153-9|AAC69041.1|  511|Caenorhabditis elegans Hypothetical pr...    29   6.0  

>AL132865-1|CAB60595.1|  110|Caenorhabditis elegans Hypothetical
           protein Y62E10A.1 protein.
          Length = 110

 Score = 77.4 bits (182), Expect = 1e-14
 Identities = 47/112 (41%), Positives = 56/112 (50%)
 Frame = +2

Query: 125 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 304
           MRYV+AYLLAVLGG   P   D++ ILS+VG++ADAE  K V++ L GK VE+LIA G  
Sbjct: 1   MRYVSAYLLAVLGGNANPKVDDLKNILSAVGVDADAETAKLVVSRLAGKTVEELIAEGSA 60

Query: 305 KLSSMPVGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGFGLFD 460
            L S  V GG                                   MGFGLFD
Sbjct: 61  GLVS--VSGGAAPAAAAAPAAGGAAPAADSKPAKKEEPKEESDDDMGFGLFD 110


>U97194-7|AAB52450.2|  107|Caenorhabditis elegans Hypothetical
           protein C37A2.7 protein.
          Length = 107

 Score = 74.5 bits (175), Expect = 9e-14
 Identities = 33/69 (47%), Positives = 47/69 (68%)
 Frame = +2

Query: 125 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 304
           M+Y+ AYLLA LGG  +P+A DV K+L + G++ D E    V+  L GK + ++IA G+ 
Sbjct: 1   MKYLGAYLLATLGGNASPSAQDVLKVLEAGGLDCDMENANSVVDALKGKTISEVIAQGKV 60

Query: 305 KLSSMPVGG 331
           KLSS+P GG
Sbjct: 61  KLSSVPSGG 69


>Z70752-5|CAA94758.1|  901|Caenorhabditis elegans Hypothetical
           protein F25B3.1 protein.
          Length = 901

 Score = 31.9 bits (69), Expect = 0.65
 Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
 Frame = +2

Query: 170 TTPAAADVEKILSSVGIEADAEKLKKVITEL-NGKDVEQLI 289
           +TPA+A   +I  + GI    EK+  +ITE+ N KD+E+ +
Sbjct: 444 STPASASDHRISRTFGINESEEKVVAMITEIRNQKDLEEAV 484


>Z70750-16|CAA94750.1|  901|Caenorhabditis elegans Hypothetical
           protein F25B3.1 protein.
          Length = 901

 Score = 31.9 bits (69), Expect = 0.65
 Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
 Frame = +2

Query: 170 TTPAAADVEKILSSVGIEADAEKLKKVITEL-NGKDVEQLI 289
           +TPA+A   +I  + GI    EK+  +ITE+ N KD+E+ +
Sbjct: 444 STPASASDHRISRTFGINESEEKVVAMITEIRNQKDLEEAV 484


>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoformb protein.
          Length = 1437

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 13/35 (37%), Positives = 13/35 (37%)
 Frame = +3

Query: 672 PGGXXXPFXGGXXXPPPXXKXXXXXXGXXPPPXXP 776
           P G   P  GG   PPP         G  PPP  P
Sbjct: 731 PPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP 765


>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoforma protein.
          Length = 1435

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 13/35 (37%), Positives = 13/35 (37%)
 Frame = +3

Query: 672 PGGXXXPFXGGXXXPPPXXKXXXXXXGXXPPPXXP 776
           P G   P  GG   PPP         G  PPP  P
Sbjct: 731 PPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP 765


>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
          Length = 1018

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 13/35 (37%), Positives = 13/35 (37%)
 Frame = +3

Query: 672 PGGXXXPFXGGXXXPPPXXKXXXXXXGXXPPPXXP 776
           P G   P  GG   PPP         G  PPP  P
Sbjct: 314 PPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP 348


>U53153-9|AAC69041.1|  511|Caenorhabditis elegans Hypothetical
           protein T19A5.5 protein.
          Length = 511

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 12/35 (34%), Positives = 15/35 (42%)
 Frame = +3

Query: 54  C*RLFKTNVILSALHVSCQLGLKKCVTWPRIYWLC 158
           C   F+   +    H  CQ G  +CV  PR  W C
Sbjct: 41  CAAFFRRVFVTHKQHFKCQTGQNQCVPDPRGRWNC 75


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,195,497
Number of Sequences: 27780
Number of extensions: 192954
Number of successful extensions: 585
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 489
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 559
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2307803960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)