Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_C09
         (858 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    23   3.6  
AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     23   3.6  
AF213011-1|AAG43567.1|   62|Apis mellifera esterase A2 protein.        23   4.8  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       23   4.8  
U15954-1|AAA67442.1|   53|Apis mellifera abaecin precursor protein.    22   6.3  
AF442147-1|AAL35348.1|   33|Apis mellifera abaecin precursor pro...    22   6.3  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    22   8.3  

>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 8/16 (50%), Positives = 8/16 (50%)
 Frame = +1

Query: 769 PPXPPXPXPXPXPXGP 816
           PP P  P P P   GP
Sbjct: 338 PPKPAPPPPPPSSSGP 353


>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.
          Length = 247

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = -1

Query: 549 QLSGSNVTXVRFNYRVQLLQHIR 481
           Q++G+N+T  + +   QL QH+R
Sbjct: 157 QMNGNNITNFKNSNIFQLKQHMR 179


>AF213011-1|AAG43567.1|   62|Apis mellifera esterase A2 protein.
          Length = 62

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 12/36 (33%), Positives = 16/36 (44%)
 Frame = -1

Query: 609 YLKHGLQVVXHXGEHEITPCQLSGSNVTXVRFNYRV 502
           Y+  G  +      HE+ P  L   +V  V  NYRV
Sbjct: 23  YVHEGAFISGTSSFHEMRPDYLLPKDVVVVSSNYRV 58


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +2

Query: 755 SVXPPPXXPPXXPP 796
           S  PPP  PP  PP
Sbjct: 43  SQGPPPGGPPGAPP 56



 Score = 22.2 bits (45), Expect = 6.3
 Identities = 8/17 (47%), Positives = 8/17 (47%)
 Frame = +1

Query: 778 PPXPXPXPXPXGPGXXP 828
           PP P   P P GP   P
Sbjct: 39  PPNPSQGPPPGGPPGAP 55


>U15954-1|AAA67442.1|   53|Apis mellifera abaecin precursor protein.
          Length = 53

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 10/25 (40%), Positives = 10/25 (40%)
 Frame = +1

Query: 754 FG*XPPPXPPXPXPXPXPXGPGXXP 828
           F   P P  P P   P P  PG  P
Sbjct: 18  FAYVPLPNVPQPGRRPFPTFPGQGP 42


>AF442147-1|AAL35348.1|   33|Apis mellifera abaecin precursor
           protein.
          Length = 33

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 10/25 (40%), Positives = 10/25 (40%)
 Frame = +1

Query: 754 FG*XPPPXPPXPXPXPXPXGPGXXP 828
           F   P P  P P   P P  PG  P
Sbjct: 4   FAYVPLPNVPQPGRRPFPTFPGQGP 28


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 21.8 bits (44), Expect = 8.3
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +3

Query: 792 PPPXSXGPRDXP 827
           P P S GPRD P
Sbjct: 58  PGPGSKGPRDFP 69


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,818
Number of Sequences: 438
Number of extensions: 4382
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27673956
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)