Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_C08
         (856 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC035008-1|AAH35008.1|  652|Homo sapiens gametogenetin protein.        31   4.0  
AK093032-1|BAC04025.1|  652|Homo sapiens protein ( Homo sapiens ...    31   4.0  
AJ007041-1|CAB45385.1| 2715|Homo sapiens trithorax homologue 2 p...    31   7.1  
AF186605-1|AAD56420.1| 2605|Homo sapiens MLL2 protein protein.         31   7.1  
AB002302-1|BAA20763.3| 2415|Homo sapiens KIAA0304 protein protein.     31   7.1  

>BC035008-1|AAH35008.1|  652|Homo sapiens gametogenetin protein.
          Length = 652

 Score = 31.5 bits (68), Expect = 4.0
 Identities = 18/44 (40%), Positives = 19/44 (43%), Gaps = 3/44 (6%)
 Frame = +2

Query: 608 PPXTXXXKNPPP--QLXXXXT-PTGLXRFPRPFXPWKASPPCXS 730
           PP     K PPP  QL    T P    +FP P   WK  PP  S
Sbjct: 136 PPSLRPLKPPPPPRQLSVKDTVPRAPSQFPPPLETWKPPPPLPS 179


>AK093032-1|BAC04025.1|  652|Homo sapiens protein ( Homo sapiens
           cDNA FLJ35713 fis, clone TESTI1000019. ).
          Length = 652

 Score = 31.5 bits (68), Expect = 4.0
 Identities = 18/44 (40%), Positives = 19/44 (43%), Gaps = 3/44 (6%)
 Frame = +2

Query: 608 PPXTXXXKNPPP--QLXXXXT-PTGLXRFPRPFXPWKASPPCXS 730
           PP     K PPP  QL    T P    +FP P   WK  PP  S
Sbjct: 136 PPSLRPLKPPPPPRQLSVKDTVPRAPSQFPPPLETWKPPPPLPS 179


>AJ007041-1|CAB45385.1| 2715|Homo sapiens trithorax homologue 2
           protein.
          Length = 2715

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 17/44 (38%), Positives = 19/44 (43%)
 Frame = +2

Query: 602 PPPPXTXXXKNPPPQLXXXXTPTGLXRFPRPFXPWKASPPCXSP 733
           PPPP T    +PPP L    T       P P  P  + PP  SP
Sbjct: 402 PPPPLTPPAPSPPPPLPPPSTSPPPPLCPPP-PPPVSPPPLPSP 444


>AF186605-1|AAD56420.1| 2605|Homo sapiens MLL2 protein protein.
          Length = 2605

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 17/44 (38%), Positives = 19/44 (43%)
 Frame = +2

Query: 602 PPPPXTXXXKNPPPQLXXXXTPTGLXRFPRPFXPWKASPPCXSP 733
           PPPP T    +PPP L    T       P P  P  + PP  SP
Sbjct: 292 PPPPLTPPAPSPPPPLPPPSTSPPPPLCPPP-PPPVSPPPLPSP 334


>AB002302-1|BAA20763.3| 2415|Homo sapiens KIAA0304 protein protein.
          Length = 2415

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 17/44 (38%), Positives = 19/44 (43%)
 Frame = +2

Query: 602 PPPPXTXXXKNPPPQLXXXXTPTGLXRFPRPFXPWKASPPCXSP 733
           PPPP T    +PPP L    T       P P  P  + PP  SP
Sbjct: 102 PPPPLTPPAPSPPPPLPPPSTSPPPPLCPPP-PPPVSPPPLPSP 144


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,889,310
Number of Sequences: 237096
Number of extensions: 1102798
Number of successful extensions: 3023
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2024
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2729
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10872716010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)