Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_C07
(862 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1171 - 35089719-35090336,35090596-35090715,35090851-350911... 31 1.2
10_02_0067 + 4884902-4885210,4886008-4886037 31 1.6
07_03_1049 + 23566140-23566403,23567453-23567525,23567591-235677... 30 2.7
06_03_0143 + 17215975-17216745 29 3.6
11_01_0343 - 2551995-2552951 29 6.3
08_02_0292 - 15420378-15421229 29 6.3
06_03_1146 - 28004896-28005554,28005664-28005844 29 6.3
02_01_0016 + 110796-110979,111252-111768,111847-112213 29 6.3
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095... 28 8.3
10_08_0683 - 19860777-19861070,19861677-19861874,19862498-198626... 28 8.3
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 28 8.3
02_01_0364 + 2615056-2615239,2615573-2615637,2616016-2616103,261... 28 8.3
01_06_0027 - 25742122-25742310,25742481-25742553,25743219-25744159 28 8.3
>01_06_1171 -
35089719-35090336,35090596-35090715,35090851-35091108,
35091934-35092563
Length = 541
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +1
Query: 550 PPERASQKSTLKSEVAKPDRTIKIPGRFPLQAPSCA 657
P ER + ++ ++S + D IK+P R+PLQ PS A
Sbjct: 431 PSERPTMRAVVESLASVQD--IKVPCRYPLQEPSAA 464
>10_02_0067 + 4884902-4885210,4886008-4886037
Length = 112
Score = 30.7 bits (66), Expect = 1.6
Identities = 21/68 (30%), Positives = 31/68 (45%)
Frame = -1
Query: 856 PG*GXQRSGXXXGGWXTPGPGXERRDXNTGTGGYXQX*AMRKAATASRRGERAGQVSGKX 677
PG G QRSG GG PG G + G GG+ + +A + ++ +G V +
Sbjct: 22 PGSGGQRSGGGGGGGQQPGEG------SGGIGGWI---CLLEAKSGGQQSGGSGSVGNRR 72
Query: 676 PGXGTGER 653
G G+R
Sbjct: 73 SEGGGGDR 80
>07_03_1049 +
23566140-23566403,23567453-23567525,23567591-23567742,
23567835-23568524,23568643-23568869,23569118-23569208
Length = 498
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +3
Query: 627 PFPPASSLVRSPVPXPGXLPDTCPALSPLREAVAAF 734
P PP ++L +P P P LP CPA + R AF
Sbjct: 3 PPPPLAALRPAPFPLPRLLP--CPASAAARRGAVAF 36
>06_03_0143 + 17215975-17216745
Length = 256
Score = 29.5 bits (63), Expect = 3.6
Identities = 19/64 (29%), Positives = 22/64 (34%), Gaps = 1/64 (1%)
Frame = +3
Query: 630 FPPASSLVRSPV-PXPGXLPDTCPALSPLREAVAAFLIAHXCXYPPVPVLXSLRSXPGPG 806
FP +S P P PG T PA EA AA + PP+ G G
Sbjct: 42 FPSSSGASSQPAQPGPGAASSTIPAFPEQSEAAAATSVCQLAPSPPLLPAVLASCNAGGG 101
Query: 807 VXQP 818
P
Sbjct: 102 ALPP 105
>11_01_0343 - 2551995-2552951
Length = 318
Score = 28.7 bits (61), Expect = 6.3
Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = +3
Query: 591 GGETRQDYKDTRPFPPASSLVRS--PVPXPGXLP 686
G R + D PFP A++ V S P P PG LP
Sbjct: 80 GDGYRAFFADAFPFPEAAAAVASAAPAPVPGSLP 113
>08_02_0292 - 15420378-15421229
Length = 283
Score = 28.7 bits (61), Expect = 6.3
Identities = 18/59 (30%), Positives = 25/59 (42%)
Frame = -1
Query: 799 PGXERRDXNTGTGGYXQX*AMRKAATASRRGERAGQVSGKXPGXGTGERTRELAGGNGL 623
P RR+ T GG + + + A RRGE G+ RT + AGG G+
Sbjct: 29 PSGRRRELTTSGGGRSRRRSRTRRRRARRRGEERSSGGGR---SRMRRRTWQRAGGGGM 84
>06_03_1146 - 28004896-28005554,28005664-28005844
Length = 279
Score = 28.7 bits (61), Expect = 6.3
Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 1/66 (1%)
Frame = +3
Query: 627 PFPPASSLVRSPVPXP-GXLPDTCPALSPLREAVAAFLIAHXCXYPPVPVLXSLRSXPGP 803
P P ++ S P P P P++SP+ A A P + S + PG
Sbjct: 165 PSPAPAAATPSLAPSPVATTPSPSPSVSPMAPAPAPTTSTPSSPPAPAAMAPSPSTTPG- 223
Query: 804 GVXQPP 821
GV QPP
Sbjct: 224 GVAQPP 229
>02_01_0016 + 110796-110979,111252-111768,111847-112213
Length = 355
Score = 28.7 bits (61), Expect = 6.3
Identities = 22/70 (31%), Positives = 27/70 (38%), Gaps = 4/70 (5%)
Frame = +3
Query: 621 TRPFPPASSLVRSPVPXPGXLP----DTCPALSPLREAVAAFLIAHXCXYPPVPVLXSLR 788
T P PPA +L SP+P P P P L PL L PP + ++
Sbjct: 157 TSPSPPALALAPSPIPTPIIAPPPVSSPAPPLPPLWRRRPRRLPPIWRPTPPSLPVDTMP 216
Query: 789 SXPGPGVXQP 818
P P QP
Sbjct: 217 PPPPPPPPQP 226
>10_08_0940 -
21708557-21708733,21709058-21709142,21709330-21709551,
21710640-21710815,21711883-21711946,21712433-21712507,
21715114-21715199,21715297-21716715
Length = 767
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Frame = +1
Query: 304 NESAN---ARGEAVCVLGALPLPRSLTRCAR 387
+ESAN AR EAV +G +P+ L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464
>10_08_0683 -
19860777-19861070,19861677-19861874,19862498-19862659,
19862763-19862911,19863089-19863236,19863317-19863385,
19863471-19863719,19863937-19864131,19864444-19864560,
19864978-19866537
Length = 1046
Score = 28.3 bits (60), Expect = 8.3
Identities = 20/77 (25%), Positives = 31/77 (40%), Gaps = 3/77 (3%)
Frame = +3
Query: 612 YKDTRPFP---PASSLVRSPVPXPGXLPDTCPALSPLREAVAAFLIAHXCXYPPVPVLXS 782
Y P P P+SS P P P P + P+ + + +A ++ YPP P +
Sbjct: 111 YPSPNPSPSISPSSSFHHHPEP-PSPSP-SAPSYPSIADGLANMHVSDRHDYPPPPSPAA 168
Query: 783 LRSXPGPGVXQPPXXXP 833
+ + P V P P
Sbjct: 169 VPAASSPSVLPPSASFP 185
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 28.3 bits (60), Expect = 8.3
Identities = 19/66 (28%), Positives = 24/66 (36%), Gaps = 1/66 (1%)
Frame = +3
Query: 627 PFPP-ASSLVRSPVPXPGXLPDTCPALSPLREAVAAFLIAHXCXYPPVPVLXSLRSXPGP 803
P PP A + + P P PA P + +A PP P + PGP
Sbjct: 307 PLPPGAGAGAGTGAPPPPPAHPAAPAPPPPAPSPSAAGAGSGPPPPPPPAAPAAPRPPGP 366
Query: 804 GVXQPP 821
G PP
Sbjct: 367 GPGPPP 372
>02_01_0364 +
2615056-2615239,2615573-2615637,2616016-2616103,
2616202-2616269,2616653-2616703,2617168-2617285,
2617463-2617509,2617603-2617629,2617806-2617881,
2618157-2618296,2618623-2618721
Length = 320
Score = 28.3 bits (60), Expect = 8.3
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = -1
Query: 805 PGPGXERRDXNTGTGGYXQX*AMRKAATASRRGERAGQVSGKXPGXGT 662
P P + D N G + RKA + +G++ +V+GK GT
Sbjct: 259 PEPHASQNDQNNEDGDQPKAKTKRKAEKPAGKGQKKAKVAGKATKKGT 306
>01_06_0027 - 25742122-25742310,25742481-25742553,25743219-25744159
Length = 400
Score = 28.3 bits (60), Expect = 8.3
Identities = 18/39 (46%), Positives = 20/39 (51%)
Frame = +3
Query: 594 GETRQDYKDTRPFPPASSLVRSPVPXPGXLPDTCPALSP 710
GET + RP PP VR PVP P P+T P SP
Sbjct: 2 GETPRTPAPDRPPPPVP--VRVPVPEPQPEPET-PQASP 37
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,756,007
Number of Sequences: 37544
Number of extensions: 459834
Number of successful extensions: 1570
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1476
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1559
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2409218220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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