Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_C07
         (862 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L40992-1|AAA89072.1|  440|Homo sapiens core-binding factor, runt...    32   2.3  
AL358135-1|CAI13529.1|  440|Homo sapiens runt-related transcript...    32   2.3  
AL161907-1|CAI19637.1|  440|Homo sapiens runt-related transcript...    32   2.3  
AL096865-1|CAI19926.1|  440|Homo sapiens runt-related transcript...    32   2.3  
AK001021-1|BAA91470.1|  268|Homo sapiens protein ( Homo sapiens ...    32   2.3  
AF216972-1|AAF76750.1|   77|Homo sapiens p8 protein protein.           32   2.3  

>L40992-1|AAA89072.1|  440|Homo sapiens core-binding factor, runt
           domain, alpha subunit 1 protein.
          Length = 440

 Score = 32.3 bits (70), Expect = 2.3
 Identities = 24/84 (28%), Positives = 34/84 (40%), Gaps = 3/84 (3%)
 Frame = +3

Query: 561 SITKIDAQVRGGETRQDYKDTRPFPPASSLVRSPVPXPG-XLPDTCPALSPLREAVAAFL 737
           +IT +  ++ G      + D R FP  SSL  S    P    P T     P+   ++  +
Sbjct: 272 AITDVPRRISGASELGPFSDPRQFPSISSLTESRFSNPRMHYPATFTYTPPVTSGMSLGM 331

Query: 738 IA--HXCXYPPVPVLXSLRSXPGP 803
            A  H   Y P P   S +S  GP
Sbjct: 332 SATTHYHTYLPPPYPGSSQSQSGP 355


>AL358135-1|CAI13529.1|  440|Homo sapiens runt-related transcription
           factor 2 protein.
          Length = 440

 Score = 32.3 bits (70), Expect = 2.3
 Identities = 24/84 (28%), Positives = 34/84 (40%), Gaps = 3/84 (3%)
 Frame = +3

Query: 561 SITKIDAQVRGGETRQDYKDTRPFPPASSLVRSPVPXPG-XLPDTCPALSPLREAVAAFL 737
           +IT +  ++ G      + D R FP  SSL  S    P    P T     P+   ++  +
Sbjct: 272 AITDVPRRISGASELGPFSDPRQFPSISSLTESRFSNPRMHYPATFTYTPPVTSGMSLGM 331

Query: 738 IA--HXCXYPPVPVLXSLRSXPGP 803
            A  H   Y P P   S +S  GP
Sbjct: 332 SATTHYHTYLPPPYPGSSQSQSGP 355


>AL161907-1|CAI19637.1|  440|Homo sapiens runt-related transcription
           factor 2 protein.
          Length = 440

 Score = 32.3 bits (70), Expect = 2.3
 Identities = 24/84 (28%), Positives = 34/84 (40%), Gaps = 3/84 (3%)
 Frame = +3

Query: 561 SITKIDAQVRGGETRQDYKDTRPFPPASSLVRSPVPXPG-XLPDTCPALSPLREAVAAFL 737
           +IT +  ++ G      + D R FP  SSL  S    P    P T     P+   ++  +
Sbjct: 272 AITDVPRRISGASELGPFSDPRQFPSISSLTESRFSNPRMHYPATFTYTPPVTSGMSLGM 331

Query: 738 IA--HXCXYPPVPVLXSLRSXPGP 803
            A  H   Y P P   S +S  GP
Sbjct: 332 SATTHYHTYLPPPYPGSSQSQSGP 355


>AL096865-1|CAI19926.1|  440|Homo sapiens runt-related transcription
           factor 2 protein.
          Length = 440

 Score = 32.3 bits (70), Expect = 2.3
 Identities = 24/84 (28%), Positives = 34/84 (40%), Gaps = 3/84 (3%)
 Frame = +3

Query: 561 SITKIDAQVRGGETRQDYKDTRPFPPASSLVRSPVPXPG-XLPDTCPALSPLREAVAAFL 737
           +IT +  ++ G      + D R FP  SSL  S    P    P T     P+   ++  +
Sbjct: 272 AITDVPRRISGASELGPFSDPRQFPSISSLTESRFSNPRMHYPATFTYTPPVTSGMSLGM 331

Query: 738 IA--HXCXYPPVPVLXSLRSXPGP 803
            A  H   Y P P   S +S  GP
Sbjct: 332 SATTHYHTYLPPPYPGSSQSQSGP 355


>AK001021-1|BAA91470.1|  268|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10159 fis, clone HEMBA1003528. ).
          Length = 268

 Score = 32.3 bits (70), Expect = 2.3
 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
 Frame = +3

Query: 627 PFPPASSLVRSPVPXPGXLPDTCPALSPLREAVAAFLIAHXCXYP-PVPV 773
           PFPP S +   P+P P  +    P+L+PL       L+ +    P PVP+
Sbjct: 86  PFPPVSMMPNGPMPVPQMMNFGLPSLAPL-VPPPTLLVPYPVIVPLPVPI 134


>AF216972-1|AAF76750.1|   77|Homo sapiens p8 protein protein.
          Length = 77

 Score = 32.3 bits (70), Expect = 2.3
 Identities = 17/33 (51%), Positives = 17/33 (51%)
 Frame = +3

Query: 624 RPFPPASSLVRSPVPXPGXLPDTCPALSPLREA 722
           RP PP  S  R P P PG  P T PA  P R A
Sbjct: 41  RPAPPPPS--RPPQPRPGPAPPTPPAARPARPA 71


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,860,313
Number of Sequences: 237096
Number of extensions: 2452335
Number of successful extensions: 8558
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7893
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8499
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10984231046
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)