Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_B22
         (877 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_04_0204 - 19022329-19023990                                         31   0.92 
02_01_0223 + 1453478-1453750,1455788-1456018,1456066-1456200,145...    29   3.7  
06_03_0613 + 22748223-22749513,22750046-22750179,22751066-227513...    28   8.5  
04_01_0064 - 634636-634950                                             28   8.5  
01_06_1477 + 37645143-37647425                                         28   8.5  

>05_04_0204 - 19022329-19023990
          Length = 553

 Score = 31.5 bits (68), Expect = 0.92
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = +1

Query: 277 IEKSCDEYMNVDVVKQFMEMYKMGMLPRGETF 372
           + K CDE+  + VVK F +M K G+ P   TF
Sbjct: 355 MRKLCDEHRWLSVVKLFTDMAKKGIAPNSWTF 386


>02_01_0223 +
           1453478-1453750,1455788-1456018,1456066-1456200,
           1457918-1457971,1458417-1458482,1458593-1458679,
           1459338-1459394,1459470-1459500,1459577-1459634,
           1459710-1459761,1459881-1459917,1460008-1460210,
           1460556-1460633,1460683-1460853,1461126-1461239
          Length = 548

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 15/39 (38%), Positives = 18/39 (46%)
 Frame = -1

Query: 634 HLHHKGFTDDMAVNEEVGIDLVRSGQVETXAVGSVEARG 518
           H HH G   D A   EV  D V +      A G+V+ RG
Sbjct: 24  HHHHDGAAGDSAAAAEVPQDKVVAAAAAAAAAGNVQRRG 62


>06_03_0613 +
           22748223-22749513,22750046-22750179,22751066-22751309,
           22751401-22751609,22751691-22751740,22751933-22752053,
           22752138-22752383
          Length = 764

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 21/72 (29%), Positives = 33/72 (45%)
 Frame = -3

Query: 422 TRKTLTASSIWSSLVWTKVSPRGSMPILYISMNCLTTSTFMYSSQLFSMLYCLGDLLDVL 243
           +R TL +  +W  L   K+    ++ +L ++ NCL  +      + FS +Y L  L  VL
Sbjct: 118 SRLTLASLGVWGELPGAKLHRLQALRVLNLTGNCLYGAV----PEHFSRMYSLQSL--VL 171

Query: 242 KHGRLEDMVKQL 207
              RL   V  L
Sbjct: 172 SRNRLNGAVPNL 183


>04_01_0064 - 634636-634950
          Length = 104

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = -3

Query: 320 LTTSTFMYSSQLFSMLYCLGDLLDVLKHGRLEDMV 216
           LTT    ++ +L S  Y + D+LDV  + RLE+ V
Sbjct: 69  LTTDMEQWACRLRSAFYDVEDILDVADYNRLENKV 103


>01_06_1477 + 37645143-37647425
          Length = 760

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
 Frame = -1

Query: 661 DPGSLGGFSHLHHKGFTDDMAVNEEVGIDLVRSGQ--VETXAVGSVEARGSKSVD 503
           DP ++G F+ + H  F    A N+  G+ ++ +G     T A G+V+   S  V+
Sbjct: 294 DPVAIGSFAAMQHGIFVSTSAGNDGPGLSVLHNGAPWALTVAAGTVDREFSGIVE 348


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,565,633
Number of Sequences: 37544
Number of extensions: 419884
Number of successful extensions: 1045
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1021
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1044
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)