Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_B20
(956 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_03_0117 + 12684729-12685886,12685978-12686145,12686292-126863... 33 0.25
12_02_0299 - 17051570-17052474,17053542-17053755 31 1.4
03_01_0515 - 3864796-3865425 31 1.4
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 30 2.4
02_02_0544 + 11367660-11368061,11368139-11368478,11369444-113695... 30 3.1
03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542... 29 4.1
11_01_0385 + 2915532-2916482 29 5.5
09_02_0543 + 10427321-10428315,10428440-10429154 29 5.5
09_06_0277 - 21983049-21983080,21983250-21984788,21986619-219866... 29 7.2
06_03_1146 - 28004896-28005554,28005664-28005844 29 7.2
11_06_0610 - 25449085-25453284 28 9.6
07_03_0560 + 19479597-19480667 28 9.6
07_03_0177 - 14770777-14772045 28 9.6
05_01_0004 - 34967-35149,35340-35501,36078-36225,36309-36385,365... 28 9.6
03_02_0155 - 5974118-5974173,5974242-5974314,5974393-5974500,597... 28 9.6
02_05_1276 + 35397948-35398298,35398937-35401738,35402085-354023... 28 9.6
>01_03_0117 +
12684729-12685886,12685978-12686145,12686292-12686336,
12686438-12687280
Length = 737
Score = 33.5 bits (73), Expect = 0.25
Identities = 17/59 (28%), Positives = 20/59 (33%)
Frame = +1
Query: 559 PPXXRGVRXPXPRPXXXHXXXXHXPXSPPQPXXXXPPXXXXXSXPPISLXXXPXXXPXQ 735
PP P P P H H P PP PP + PP ++ P P Q
Sbjct: 192 PPSLPPAEPPVPSPSPEHPPR-HSPSKPPAYAPAKPPTALRPAIPPAAMPKPPSVAPVQ 249
>12_02_0299 - 17051570-17052474,17053542-17053755
Length = 372
Score = 31.1 bits (67), Expect = 1.4
Identities = 22/84 (26%), Positives = 23/84 (27%), Gaps = 1/84 (1%)
Frame = +2
Query: 521 PPXXXXLAXXXPXPPXXVASAPXXXAPXXPTSXXXTXPRPPXSXS-XXXLXXAXEXXFRP 697
PP A P PP A P P P P PP + P
Sbjct: 252 PPSPPPPAFPFPLPPWPWAPPPAFPFPHLPPIFSPPSPPPPPPPAFPFPFPQLPPLPHFP 311
Query: 698 SLSPXXPXPXPXXPXPQXPXXXHP 769
L P P P P P P P
Sbjct: 312 PLPSFYPSPPPPPPPPPPPPPSFP 335
>03_01_0515 - 3864796-3865425
Length = 209
Score = 31.1 bits (67), Expect = 1.4
Identities = 16/56 (28%), Positives = 18/56 (32%)
Frame = +2
Query: 482 PQXXPXXXXXGXXPPXXXXLAXXXPXPPXXVASAPXXXAPXXPTSXXXTXPRPPXS 649
P P PP L P PP +S P P P + P PP S
Sbjct: 50 PLAPPPSVTSSPPPPAAGPLMPPPPPPPSVTSSPPPPPLPPPPPPPAASPPPPPPS 105
Score = 28.7 bits (61), Expect = 7.2
Identities = 17/59 (28%), Positives = 18/59 (30%)
Frame = +3
Query: 723 PXPTXLXPKXPXPHIXPXXTIAXSAXXSX*XXSTXXXXXXPPPPXXVSPSPXXSXXTPP 899
P P P P P P T + PPPP PSP S PP
Sbjct: 61 PPPPAAGPLMPPPPPPPSVTSSPPPPPLPPPPPPPAASPPPPPPSPPPPSPVKSSPPPP 119
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 30.3 bits (65), Expect = 2.4
Identities = 18/72 (25%), Positives = 19/72 (26%)
Frame = +1
Query: 481 PPXXXXXXXGWPXXXXXXXPXXXXSXPPXXRGVRXPXPRPXXXHXXXXHXPXSPPQPXXX 660
PP G P + PP G P P P H P P P
Sbjct: 1149 PPPPPVGGLGGPPAPPPPAGFRGGTPPPNAHGGVAPPPPPPRGHGGVGGPPTPPGAPAPP 1208
Query: 661 XPPXXXXXSXPP 696
PP PP
Sbjct: 1209 MPPGVPGGPPPP 1220
>02_02_0544 +
11367660-11368061,11368139-11368478,11369444-11369571,
11371249-11371404
Length = 341
Score = 29.9 bits (64), Expect = 3.1
Identities = 18/45 (40%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Frame = -1
Query: 923 AXXGLXGXGG-GXX*XXRRGGNXXGRRGXGXXXXXRXXSGRXXGG 792
A L G GG G RRGG GRR G R + R GG
Sbjct: 278 AAANLQGGGGDGPEKGARRGGGLQGRRASGGLAAEREGANRQGGG 322
>03_02_0071 +
5425722-5427154,5427259-5427464,5428445-5428686,
5428788-5429570
Length = 887
Score = 29.5 bits (63), Expect = 4.1
Identities = 14/45 (31%), Positives = 15/45 (33%)
Frame = +1
Query: 562 PXXRGVRXPXPRPXXXHXXXXHXPXSPPQPXXXXPPXXXXXSXPP 696
P + V P PRP P PP P PP PP
Sbjct: 330 PDTKQVTSPSPRPVQPSNAPPPPPPPPPPPPPPPPPKLNTAPKPP 374
>11_01_0385 + 2915532-2916482
Length = 316
Score = 29.1 bits (62), Expect = 5.5
Identities = 19/76 (25%), Positives = 21/76 (27%), Gaps = 2/76 (2%)
Frame = +1
Query: 475 PXPPXXXXXXXGWPXXXXXXXPXXXXSXPPXXRGVRXPXPRPXXXHXXXXHXPXSP--PQ 648
P PP WP P PP + H P +P PQ
Sbjct: 181 PLPPFNQPPTPEWPHPGNKWPPLPPFHPPPTPAWPHPGGNKWPPLPPFPSHPPPTPAWPQ 240
Query: 649 PXXXXPPXXXXXSXPP 696
P PP S PP
Sbjct: 241 PGNKWPPLPPFPSHPP 256
>09_02_0543 + 10427321-10428315,10428440-10429154
Length = 569
Score = 29.1 bits (62), Expect = 5.5
Identities = 22/92 (23%), Positives = 25/92 (27%)
Frame = +2
Query: 470 PXXXPQXXPXXXXXGXXPPXXXXLAXXXPXPPXXVASAPXXXAPXXPTSXXXTXPRPPXS 649
P PQ P PP A P PP A P P P P +
Sbjct: 18 PTPAPQATPPPAIPESGPPPPP--APDMPPPPPTPAPQSSPAPPPAPDMTPPPGPGPAAA 75
Query: 650 XSXXXLXXAXEXXFRPSLSPXXPXPXPXXPXP 745
S + P+ P P P P P
Sbjct: 76 PSPHSPSPSNAPWVAPAADIPPPPPPPPNPLP 107
>09_06_0277 -
21983049-21983080,21983250-21984788,21986619-21986655,
21987612-21987665,21987781-21987893,21988272-21988660,
21988783-21988903,21989245-21989342,21989963-21990153
Length = 857
Score = 28.7 bits (61), Expect = 7.2
Identities = 22/78 (28%), Positives = 25/78 (32%)
Frame = +3
Query: 717 PXPXPTXLXPKXPXPHIXPXXTIAXSAXXSX*XXSTXXXXXXPPPPXXVSPSPXXSXXTP 896
P P P + P P I P T S S PPP +SPSP S
Sbjct: 377 PPPPPPPMSPSCLLPPIIPAPTFTYS--------SPPPPPLYYPPPPDISPSPPPSVTPL 428
Query: 897 PXTXXXSLRXVVXXXPSL 950
P S V P +
Sbjct: 429 PPVVYPSPPEVTPSPPEI 446
>06_03_1146 - 28004896-28005554,28005664-28005844
Length = 279
Score = 28.7 bits (61), Expect = 7.2
Identities = 19/68 (27%), Positives = 24/68 (35%), Gaps = 3/68 (4%)
Frame = +2
Query: 560 PPXXVASAPXXXAPXXPTSXXXTXPRPPXSXSXXXLXX---AXEXXFRPSLSPXXPXPXP 730
PP + P AP S + P P + + L A PS+SP P P P
Sbjct: 141 PPPSPPAVPPPVAPVPMPSPASSPPSPAPAAATPSLAPSPVATTPSPSPSVSPMAPAPAP 200
Query: 731 XXPXPQXP 754
P P
Sbjct: 201 TTSTPSSP 208
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 28.3 bits (60), Expect = 9.6
Identities = 15/59 (25%), Positives = 18/59 (30%)
Frame = +3
Query: 723 PXPTXLXPKXPXPHIXPXXTIAXSAXXSX*XXSTXXXXXXPPPPXXVSPSPXXSXXTPP 899
P P P P P I P + + PPP +SP P PP
Sbjct: 1161 PPPPIKSPPPPAPVISPPPPVKSPPPPAPVILPPPPVKSPPPPAPVISPPPPVKSPPPP 1219
>07_03_0560 + 19479597-19480667
Length = 356
Score = 28.3 bits (60), Expect = 9.6
Identities = 28/95 (29%), Positives = 28/95 (29%)
Frame = -1
Query: 914 GLXGXGGGXX*XXRRGGNXXGRRGXGXXXXXRXXSGRXXGGSXNSXXRXDVXXXXFGXXX 735
GL G GGG GG G G G G GGS FG
Sbjct: 123 GLGGGGGGGL----GGGGGGGVGGGGGQGGGFGAGGGVGGGSGTGGGLGGGGGGGFGGDG 178
Query: 734 CXGXXXGXXXREMGGXEXXXXXGGXXXXGXGGDXG 630
G G GG E GG G GG G
Sbjct: 179 GGGLGGG------GGKEGGFGAGGGVGGGAGGGGG 207
>07_03_0177 - 14770777-14772045
Length = 422
Score = 28.3 bits (60), Expect = 9.6
Identities = 28/111 (25%), Positives = 31/111 (27%), Gaps = 1/111 (0%)
Frame = -1
Query: 914 GLXGXGGGXX*XXRRGGNXXGRRGXGXXXXXRXXSGRXXG-GSXNSXXRXDVXXXXFGXX 738
G G GGG +GG G G G SG G G G
Sbjct: 285 GGIGKGGGIGGGFGKGGGLGGGGGLGGGGGLGGGSGLGGGIGKGGGLGGSFGKGGGLGGG 344
Query: 737 XCXGXXXGXXXREMGGXEXXXXXGGXXXXGXGGDXGXWXXXXWXXXGRGXG 585
G G + GG GG G GG G G+G G
Sbjct: 345 FGKGGGIGGGFGKGGGLGGGGGLGGGGGGGGGGFGGGGGSGIGGGFGKGGG 395
>05_01_0004 -
34967-35149,35340-35501,36078-36225,36309-36385,
36507-36577,36850-37263,37518-38268
Length = 601
Score = 28.3 bits (60), Expect = 9.6
Identities = 16/73 (21%), Positives = 23/73 (31%)
Frame = +2
Query: 554 PXPPXXVASAPXXXAPXXPTSXXXTXPRPPXSXSXXXLXXAXEXXFRPSLSPXXPXPXPX 733
P +A++P P P + P+PP + L P+ P P
Sbjct: 67 PSATPPLAASPPPPPPPPPPRNSPSPPKPPSQAAQSPLPPTTTTTTPPTAPVPAAAPPPT 126
Query: 734 XPXPQXPXXXHPT 772
P P PT
Sbjct: 127 APSPYSAPSPTPT 139
>03_02_0155 -
5974118-5974173,5974242-5974314,5974393-5974500,
5975189-5976914,5977065-5977620,5978008-5978485
Length = 998
Score = 28.3 bits (60), Expect = 9.6
Identities = 14/45 (31%), Positives = 15/45 (33%)
Frame = +1
Query: 562 PXXRGVRXPXPRPXXXHXXXXHXPXSPPQPXXXXPPXXXXXSXPP 696
P + P PRP P SPP P PP PP
Sbjct: 64 PMPGSLPPPPPRPPSFAPENALPPSSPPPPSPPPPPPSSPPPVPP 108
>02_05_1276 +
35397948-35398298,35398937-35401738,35402085-35402306,
35402503-35402562,35402615-35402698,35402740-35402816,
35403147-35403363
Length = 1270
Score = 28.3 bits (60), Expect = 9.6
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +3
Query: 843 PPPPXXVSPSPXXSXXTPP 899
PPPP SPSP TPP
Sbjct: 20 PPPPASSSPSPPPPAATPP 38
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,736,017
Number of Sequences: 37544
Number of extensions: 252536
Number of successful extensions: 1336
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 703
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1186
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2764678640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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