Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_B20
(956 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL354775-1|CAI12730.1| 276|Homo sapiens protein ( Human DNA seq... 33 2.0
D88460-1|BAA20128.1| 505|Homo sapiens N-WASP protein. 32 3.6
BC023532-1|AAH23532.1| 641|Homo sapiens WW domain binding prote... 31 4.7
BC016441-1|AAH16441.2| 400|Homo sapiens WBP11 protein protein. 31 4.7
BC001621-1|AAH01621.1| 641|Homo sapiens WW domain binding prote... 31 4.7
AF118023-1|AAD30425.1| 641|Homo sapiens SH3 domain-binding prot... 31 4.7
AB029309-1|BAA88410.1| 641|Homo sapiens Npw38-binding protein N... 31 4.7
BC052955-1|AAH52955.1| 505|Homo sapiens Wiskott-Aldrich syndrom... 31 8.2
AC006333-1|AAQ96857.1| 505|Homo sapiens unknown protein. 31 8.2
>AL354775-1|CAI12730.1| 276|Homo sapiens protein ( Human DNA
sequence from clone RP11-223F20 on chromosome 13
Contains a novel heterogeneous nuclear ribonucleoprotein
family A protein and).
Length = 276
Score = 32.7 bits (71), Expect = 2.0
Identities = 29/97 (29%), Positives = 30/97 (30%), Gaps = 3/97 (3%)
Frame = -1
Query: 905 GXGGGXX*XXRRGGNXX---GRRGXGXXXXXRXXSGRXXGGSXNSXXRXDVXXXXFGXXX 735
G GGG RGGN G G G R G GGS S R D FG
Sbjct: 112 GHGGGSGNFMGRGGNFGGAGGNFGLGGNFGGRGGYGGGGGGSRGSYGRGDGGYNRFGRDG 171
Query: 734 CXGXXXGXXXREMGGXEXXXXXGGXXXXGXGGDXGXW 624
G GG G G GG G +
Sbjct: 172 -GNYGGGPGYSSRGGYGGGGTGYGNQGGGYGGGGGGY 207
>D88460-1|BAA20128.1| 505|Homo sapiens N-WASP protein.
Length = 505
Score = 31.9 bits (69), Expect = 3.6
Identities = 22/87 (25%), Positives = 25/87 (28%)
Frame = +2
Query: 494 PXXXXXGXXPPXXXXLAXXXPXPPXXVASAPXXXAPXXPTSXXXTXPRPPXSXSXXXLXX 673
P G PP + P PP AP PT+ P PP S +
Sbjct: 280 PPPSRGGPPPPPPPPHSSGPPPPPARGRGAPPPPPSRAPTA---APPPPPPSRPSVEVPP 336
Query: 674 AXEXXFRPSLSPXXPXPXPXXPXPQXP 754
P P P P P P P
Sbjct: 337 PPPNRMYPPPPPALPSSAPSGPPPPPP 363
>BC023532-1|AAH23532.1| 641|Homo sapiens WW domain binding protein
11 protein.
Length = 641
Score = 31.5 bits (68), Expect = 4.7
Identities = 15/46 (32%), Positives = 16/46 (34%)
Frame = +1
Query: 559 PPXXRGVRXPXPRPXXXHXXXXHXPXSPPQPXXXXPPXXXXXSXPP 696
PP G+R P PR P PP P PP PP
Sbjct: 444 PPGMPGLRGPLPRLLPPGPPPGRPPGPPPGPPPGLPPGPPPRGPPP 489
>BC016441-1|AAH16441.2| 400|Homo sapiens WBP11 protein protein.
Length = 400
Score = 31.5 bits (68), Expect = 4.7
Identities = 15/46 (32%), Positives = 16/46 (34%)
Frame = +1
Query: 559 PPXXRGVRXPXPRPXXXHXXXXHXPXSPPQPXXXXPPXXXXXSXPP 696
PP G+R P PR P PP P PP PP
Sbjct: 203 PPGMPGLRGPLPRLLPPGPPPGRPPGPPPGPPPGLPPGPPPRGPPP 248
>BC001621-1|AAH01621.1| 641|Homo sapiens WW domain binding protein
11 protein.
Length = 641
Score = 31.5 bits (68), Expect = 4.7
Identities = 15/46 (32%), Positives = 16/46 (34%)
Frame = +1
Query: 559 PPXXRGVRXPXPRPXXXHXXXXHXPXSPPQPXXXXPPXXXXXSXPP 696
PP G+R P PR P PP P PP PP
Sbjct: 444 PPGMPGLRGPLPRLLPPGPPPGRPPGPPPGPPPGLPPGPPPRGPPP 489
>AF118023-1|AAD30425.1| 641|Homo sapiens SH3 domain-binding protein
SNP70 protein.
Length = 641
Score = 31.5 bits (68), Expect = 4.7
Identities = 15/46 (32%), Positives = 16/46 (34%)
Frame = +1
Query: 559 PPXXRGVRXPXPRPXXXHXXXXHXPXSPPQPXXXXPPXXXXXSXPP 696
PP G+R P PR P PP P PP PP
Sbjct: 444 PPGMPGLRGPLPRLLPPGPPPGRPPGPPPGPPPGLPPGPPPRGPPP 489
>AB029309-1|BAA88410.1| 641|Homo sapiens Npw38-binding protein
NpwBP protein.
Length = 641
Score = 31.5 bits (68), Expect = 4.7
Identities = 15/46 (32%), Positives = 16/46 (34%)
Frame = +1
Query: 559 PPXXRGVRXPXPRPXXXHXXXXHXPXSPPQPXXXXPPXXXXXSXPP 696
PP G+R P PR P PP P PP PP
Sbjct: 444 PPGMPGLRGPLPRLLPPGPPPGRPPGPPPGPPPGLPPGPPPRGPPP 489
>BC052955-1|AAH52955.1| 505|Homo sapiens Wiskott-Aldrich
syndrome-like protein.
Length = 505
Score = 30.7 bits (66), Expect = 8.2
Identities = 22/87 (25%), Positives = 24/87 (27%)
Frame = +2
Query: 494 PXXXXXGXXPPXXXXLAXXXPXPPXXVASAPXXXAPXXPTSXXXTXPRPPXSXSXXXLXX 673
P G PP P PP AP PT+ P PP S +
Sbjct: 280 PPPSRGGPPPPPPPPHNSGPPPPPARGRGAPPPPPSRAPTA---APPPPPPSRPSVAVPP 336
Query: 674 AXEXXFRPSLSPXXPXPXPXXPXPQXP 754
P P P P P P P
Sbjct: 337 PPPNRMYPPPPPALPSSAPSGPPPPPP 363
>AC006333-1|AAQ96857.1| 505|Homo sapiens unknown protein.
Length = 505
Score = 30.7 bits (66), Expect = 8.2
Identities = 22/87 (25%), Positives = 24/87 (27%)
Frame = +2
Query: 494 PXXXXXGXXPPXXXXLAXXXPXPPXXVASAPXXXAPXXPTSXXXTXPRPPXSXSXXXLXX 673
P G PP P PP AP PT+ P PP S +
Sbjct: 280 PPPSRGGPPPPPPPPHNSGPPPPPARGRGAPPPPPSRAPTA---APPPPPPSRPSVAVPP 336
Query: 674 AXEXXFRPSLSPXXPXPXPXXPXPQXP 754
P P P P P P P
Sbjct: 337 PPPNRMYPPPPPALPSSAPSGPPPPPP 363
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,063,883
Number of Sequences: 237096
Number of extensions: 1139176
Number of successful extensions: 3729
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2076
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3419
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12658656216
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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