Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_B20
(956 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY071124-1|AAL48746.1| 420|Drosophila melanogaster RE17165p pro... 32 1.3
AE014296-850|AAF47902.2| 420|Drosophila melanogaster CG15021-PA... 32 1.3
M15765-1|AAA70425.1| 365|Drosophila melanogaster unknown protei... 30 5.4
BT001738-1|AAN71493.1| 331|Drosophila melanogaster RE72617p pro... 30 5.4
U13178-1|AAA86955.1| 404|Drosophila melanogaster RNA binding pr... 29 7.1
L37083-1|AAC41563.1| 404|Drosophila melanogaster RNA binding pr... 29 7.1
>AY071124-1|AAL48746.1| 420|Drosophila melanogaster RE17165p
protein.
Length = 420
Score = 31.9 bits (69), Expect = 1.3
Identities = 25/101 (24%), Positives = 28/101 (27%)
Frame = +2
Query: 470 PXXXPQXXPXXXXXGXXPPXXXXLAXXXPXPPXXVASAPXXXAPXXPTSXXXTXPRPPXS 649
P P P PP A P PP P P P + P PP S
Sbjct: 87 PAPRPSYGPPQTQPPRPPPQPTPSA---PAPPPPSYGPPQTPPPRPPPQPTPSAPAPPPS 143
Query: 650 XSXXXLXXAXEXXFRPSLSPXXPXPXPXXPXPQXPXXXHPT 772
P +P P P P PQ P P+
Sbjct: 144 YGPPQTPPPRPP---PQPTPSAPAPSYGPPQPQPPAPQPPS 181
Score = 31.9 bits (69), Expect = 1.3
Identities = 17/61 (27%), Positives = 19/61 (31%)
Frame = +3
Query: 717 PXPXPTXLXPKXPXPHIXPXXTIAXSAXXSX*XXSTXXXXXXPPPPXXVSPSPXXSXXTP 896
P P P L P P P P + PPPP P+P TP
Sbjct: 185 PQPGPEYLPPDQPKPRPTPSRPQPPPPPPPRPQPTPGYGPPPPPPPPKPQPTPGYGPPTP 244
Query: 897 P 899
P
Sbjct: 245 P 245
Score = 29.5 bits (63), Expect = 7.1
Identities = 27/103 (26%), Positives = 32/103 (31%), Gaps = 6/103 (5%)
Frame = +2
Query: 464 ITPXXXPQXXPXXXXXGXXPPXXXXLAXXXPXPPXXVASA------PXXXAPXXPTSXXX 625
+TP PQ G PP P PP A A P AP P
Sbjct: 285 VTPTQ-PQPTAPVPEYGPPPPAPPAGPTYQPRPPAPPAPAPGPTYQPRPPAPPAPAPGPT 343
Query: 626 TXPRPPXSXSXXXLXXAXEXXFRPSLSPXXPXPXPXXPXPQXP 754
PRPP + + P+ +P P P P P P
Sbjct: 344 YQPRPPSPPAPPAPTYQPQPPAPPAPAP-GPTYQPRPPAPPAP 385
>AE014296-850|AAF47902.2| 420|Drosophila melanogaster CG15021-PA
protein.
Length = 420
Score = 31.9 bits (69), Expect = 1.3
Identities = 25/101 (24%), Positives = 28/101 (27%)
Frame = +2
Query: 470 PXXXPQXXPXXXXXGXXPPXXXXLAXXXPXPPXXVASAPXXXAPXXPTSXXXTXPRPPXS 649
P P P PP A P PP P P P + P PP S
Sbjct: 87 PAPRPSYGPPQTQPPRPPPQPTPSA---PAPPPPSYGPPQTPPPRPPPQPTPSAPAPPPS 143
Query: 650 XSXXXLXXAXEXXFRPSLSPXXPXPXPXXPXPQXPXXXHPT 772
P +P P P P PQ P P+
Sbjct: 144 YGPPQTPPPRPP---PQPTPSAPAPSYGPPQPQPPAPQPPS 181
Score = 31.9 bits (69), Expect = 1.3
Identities = 17/61 (27%), Positives = 19/61 (31%)
Frame = +3
Query: 717 PXPXPTXLXPKXPXPHIXPXXTIAXSAXXSX*XXSTXXXXXXPPPPXXVSPSPXXSXXTP 896
P P P L P P P P + PPPP P+P TP
Sbjct: 185 PQPGPEYLPPDQPKPRPTPSRPQPPPPPPPRPQPTPGYGPPPPPPPPKPQPTPGYGPPTP 244
Query: 897 P 899
P
Sbjct: 245 P 245
Score = 29.5 bits (63), Expect = 7.1
Identities = 27/103 (26%), Positives = 32/103 (31%), Gaps = 6/103 (5%)
Frame = +2
Query: 464 ITPXXXPQXXPXXXXXGXXPPXXXXLAXXXPXPPXXVASA------PXXXAPXXPTSXXX 625
+TP PQ G PP P PP A A P AP P
Sbjct: 285 VTPTQ-PQPTAPVPEYGPPPPAPPAGPTYQPRPPAPPAPAPGPTYQPRPPAPPAPAPGPT 343
Query: 626 TXPRPPXSXSXXXLXXAXEXXFRPSLSPXXPXPXPXXPXPQXP 754
PRPP + + P+ +P P P P P P
Sbjct: 344 YQPRPPSPPAPPAPTYQPQPPAPPAPAP-GPTYQPRPPAPPAP 385
>M15765-1|AAA70425.1| 365|Drosophila melanogaster unknown protein
protein.
Length = 365
Score = 29.9 bits (64), Expect = 5.4
Identities = 29/119 (24%), Positives = 31/119 (26%)
Frame = -1
Query: 914 GLXGXGGGXX*XXRRGGNXXGRRGXGXXXXXRXXSGRXXGGSXNSXXRXDVXXXXFGXXX 735
G G GGG RGG G G G R G GG N R
Sbjct: 195 GGGGGGGGGGGRFDRGGGGGGNGGGGGGRYDRGGGGGGGGGGGNVQPRDGEWKCNSCNNT 254
Query: 734 CXGXXXGXXXREMGGXEXXXXXGGXXXXGXGGDXGXWXXXXWXXXGRGXGXRTPRXXGG 558
+ + GG G GG G G G G R GG
Sbjct: 255 NFAWRNECNRCKTPKGDDEGSSGGGGGGGYGGGGGGGGYDRGNDRGSGGGGYHNRDRGG 313
>BT001738-1|AAN71493.1| 331|Drosophila melanogaster RE72617p
protein.
Length = 331
Score = 29.9 bits (64), Expect = 5.4
Identities = 27/92 (29%), Positives = 28/92 (30%)
Frame = -1
Query: 905 GXGGGXX*XXRRGGNXXGRRGXGXXXXXRXXSGRXXGGSXNSXXRXDVXXXXFGXXXCXG 726
G GGG GG GR G G GR GG + R G G
Sbjct: 12 GGGGGGG-----GGGFRGRGGGGGGGGGGFGGGRGRGGGGDRGGRGGFG----GGRGAFG 62
Query: 725 XXXGXXXREMGGXEXXXXXGGXXXXGXGGDXG 630
G R GG GG G GG G
Sbjct: 63 GRGGGGGRGGGGRGGGGRGGGGRGGGAGGFKG 94
>U13178-1|AAA86955.1| 404|Drosophila melanogaster RNA binding
protein protein.
Length = 404
Score = 29.5 bits (63), Expect = 7.1
Identities = 29/119 (24%), Positives = 31/119 (26%)
Frame = -1
Query: 914 GLXGXGGGXX*XXRRGGNXXGRRGXGXXXXXRXXSGRXXGGSXNSXXRXDVXXXXFGXXX 735
G G GGG RGG G G G R G GG N R
Sbjct: 233 GGGGGGGGGGGRFDRGGGGGGNGGGGGGRYDRGGGGGGGGGGGNVQPRDGDWKCNSCNNT 292
Query: 734 CXGXXXGXXXREMGGXEXXXXXGGXXXXGXGGDXGXWXXXXWXXXGRGXGXRTPRXXGG 558
+ + GG G GG G G G G R GG
Sbjct: 293 NFAWRNECNRCKTPKGDDEGSSGGGGGGGYGGGGGGGGYDRGNDRGSGGGGYHNRDRGG 351
>L37083-1|AAC41563.1| 404|Drosophila melanogaster RNA binding
protein protein.
Length = 404
Score = 29.5 bits (63), Expect = 7.1
Identities = 29/119 (24%), Positives = 31/119 (26%)
Frame = -1
Query: 914 GLXGXGGGXX*XXRRGGNXXGRRGXGXXXXXRXXSGRXXGGSXNSXXRXDVXXXXFGXXX 735
G G GGG RGG G G G R G GG N R
Sbjct: 233 GGGGGGGGGGGRFDRGGGGGGNGGGGGGRYDRGGGGGGGGGGGNVQPRDGDWKCNSCNNT 292
Query: 734 CXGXXXGXXXREMGGXEXXXXXGGXXXXGXGGDXGXWXXXXWXXXGRGXGXRTPRXXGG 558
+ + GG G GG G G G G R GG
Sbjct: 293 NFAWRNECNRCKTPKGDDEGSSGGGGGGGYGGGGGGGGYDRGNDRGSGGGGYHNRDRGG 351
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,209,704
Number of Sequences: 53049
Number of extensions: 372198
Number of successful extensions: 1474
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 909
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1333
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4771654299
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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