Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_B18
(906 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50311-12|AAA92315.1| 169|Caenorhabditis elegans Hypothetical p... 38 0.007
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 36 0.053
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 36 0.053
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 36 0.053
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 33 0.21
U42830-3|AAC48275.1| 195|Caenorhabditis elegans Hypothetical pr... 33 0.21
U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astaci... 33 0.37
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 32 0.49
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 32 0.49
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 32 0.49
Z81573-3|CAB04624.3| 398|Caenorhabditis elegans Hypothetical pr... 32 0.65
AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical ... 31 1.5
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 31 1.5
Z70212-9|CAA94168.1| 491|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z50742-6|CAA90619.1| 491|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z34533-1|CAA84302.3| 730|Caenorhabditis elegans Hypothetical pr... 29 3.5
U53148-3|AAB37077.1| 282|Caenorhabditis elegans Ground-like (gr... 29 3.5
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 29 3.5
AC006636-3|AAF39799.1| 139|Caenorhabditis elegans Ground-like (... 29 3.5
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 4.6
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 4.6
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 4.6
Z83232-3|CAE46672.1| 381|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z83232-2|CAB05754.2| 420|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 28 8.0
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 28 8.0
U07628-1|AAA17738.1| 515|Caenorhabditis elegans APX-1 protein. 28 8.0
AF101319-2|AAC69353.4| 515|Caenorhabditis elegans Anterior phar... 28 8.0
AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical ... 28 8.0
AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical ... 28 8.0
AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical ... 28 8.0
>U50311-12|AAA92315.1| 169|Caenorhabditis elegans Hypothetical
protein C25E10.10 protein.
Length = 169
Score = 38.3 bits (85), Expect = 0.007
Identities = 25/67 (37%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Frame = +2
Query: 149 PTRKCP-KGEHSVLYCPQMAEPDC--ENPEVHDFVDHVGPCDVPQCFCDRPNVRNTKTGK 319
P RK +G+ + C EP C ENPE D V C C C + VR++ TGK
Sbjct: 71 PIRKPECEGDEELKACGSACEPTCDNENPEC-DLV-----CMTNVCQCKKGLVRDSATGK 124
Query: 320 CVPESEC 340
CV +++C
Sbjct: 125 CVEKNKC 131
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 35.5 bits (78), Expect = 0.053
Identities = 18/59 (30%), Positives = 18/59 (30%)
Frame = +1
Query: 709 PPXGGGWXXXXPXXKXPPPPPXKXPFXFXXPPXXXPPXXXXXXXPXXXXXXXXXSPPPP 885
PP GG PPPP P PP PP P PPPP
Sbjct: 729 PPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/38 (39%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Frame = +1
Query: 709 PPXGGGWXXXXPXXKX-PPPPPXKXPFXFXXPPXXXPP 819
PP GG P PPPPP P F P PP
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 789
Score = 29.1 bits (62), Expect = 4.6
Identities = 21/67 (31%), Positives = 21/67 (31%), Gaps = 9/67 (13%)
Frame = +1
Query: 721 GGWXXXXPXXKXPPPPPXKXPFXF----XXPPXXXPPXXXXXXXPXXXXXXXXXS----- 873
GG P PPPPP P PP PP P S
Sbjct: 701 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP 760
Query: 874 PPPPXGG 894
PPPP GG
Sbjct: 761 PPPPPGG 767
Score = 29.1 bits (62), Expect = 4.6
Identities = 20/62 (32%), Positives = 20/62 (32%)
Frame = +1
Query: 709 PPXGGGWXXXXPXXKXPPPPPXKXPFXFXXPPXXXPPXXXXXXXPXXXXXXXXXSPPPPX 888
PP GG P PPPPP PP PP P PPPP
Sbjct: 730 PPPGG----LPPITGGPPPPP---------PPGGLPPISGGPPPPPPPPGGCPPPPPPPP 776
Query: 889 GG 894
G
Sbjct: 777 PG 778
Score = 28.3 bits (60), Expect = 8.0
Identities = 20/61 (32%), Positives = 20/61 (32%)
Frame = +1
Query: 709 PPXGGGWXXXXPXXKXPPPPPXKXPFXFXXPPXXXPPXXXXXXXPXXXXXXXXXSPPPPX 888
PP GG PPPPP P PP PP P PPPP
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPGGCP-----PPPPPPPPGGFKGGP---------PPPPPP 790
Query: 889 G 891
G
Sbjct: 791 G 791
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 35.5 bits (78), Expect = 0.053
Identities = 18/59 (30%), Positives = 18/59 (30%)
Frame = +1
Query: 709 PPXGGGWXXXXPXXKXPPPPPXKXPFXFXXPPXXXPPXXXXXXXPXXXXXXXXXSPPPP 885
PP GG PPPP P PP PP P PPPP
Sbjct: 729 PPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/38 (39%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Frame = +1
Query: 709 PPXGGGWXXXXPXXKX-PPPPPXKXPFXFXXPPXXXPP 819
PP GG P PPPPP P F P PP
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 789
Score = 29.1 bits (62), Expect = 4.6
Identities = 21/67 (31%), Positives = 21/67 (31%), Gaps = 9/67 (13%)
Frame = +1
Query: 721 GGWXXXXPXXKXPPPPPXKXPFXF----XXPPXXXPPXXXXXXXPXXXXXXXXXS----- 873
GG P PPPPP P PP PP P S
Sbjct: 701 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP 760
Query: 874 PPPPXGG 894
PPPP GG
Sbjct: 761 PPPPPGG 767
Score = 29.1 bits (62), Expect = 4.6
Identities = 20/62 (32%), Positives = 20/62 (32%)
Frame = +1
Query: 709 PPXGGGWXXXXPXXKXPPPPPXKXPFXFXXPPXXXPPXXXXXXXPXXXXXXXXXSPPPPX 888
PP GG P PPPPP PP PP P PPPP
Sbjct: 730 PPPGG----LPPITGGPPPPP---------PPGGLPPISGGPPPPPPPPGGCPPPPPPPP 776
Query: 889 GG 894
G
Sbjct: 777 PG 778
Score = 28.3 bits (60), Expect = 8.0
Identities = 20/61 (32%), Positives = 20/61 (32%)
Frame = +1
Query: 709 PPXGGGWXXXXPXXKXPPPPPXKXPFXFXXPPXXXPPXXXXXXXPXXXXXXXXXSPPPPX 888
PP GG PPPPP P PP PP P PPPP
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPGGCP-----PPPPPPPPGGFKGGP---------PPPPPP 790
Query: 889 G 891
G
Sbjct: 791 G 791
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 35.5 bits (78), Expect = 0.053
Identities = 18/59 (30%), Positives = 18/59 (30%)
Frame = +1
Query: 709 PPXGGGWXXXXPXXKXPPPPPXKXPFXFXXPPXXXPPXXXXXXXPXXXXXXXXXSPPPP 885
PP GG PPPP P PP PP P PPPP
Sbjct: 312 PPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 370
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/38 (39%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Frame = +1
Query: 709 PPXGGGWXXXXPXXKX-PPPPPXKXPFXFXXPPXXXPP 819
PP GG P PPPPP P F P PP
Sbjct: 335 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 372
Score = 29.1 bits (62), Expect = 4.6
Identities = 21/67 (31%), Positives = 21/67 (31%), Gaps = 9/67 (13%)
Frame = +1
Query: 721 GGWXXXXPXXKXPPPPPXKXPFXF----XXPPXXXPPXXXXXXXPXXXXXXXXXS----- 873
GG P PPPPP P PP PP P S
Sbjct: 284 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP 343
Query: 874 PPPPXGG 894
PPPP GG
Sbjct: 344 PPPPPGG 350
Score = 29.1 bits (62), Expect = 4.6
Identities = 20/62 (32%), Positives = 20/62 (32%)
Frame = +1
Query: 709 PPXGGGWXXXXPXXKXPPPPPXKXPFXFXXPPXXXPPXXXXXXXPXXXXXXXXXSPPPPX 888
PP GG P PPPPP PP PP P PPPP
Sbjct: 313 PPPGG----LPPITGGPPPPP---------PPGGLPPISGGPPPPPPPPGGCPPPPPPPP 359
Query: 889 GG 894
G
Sbjct: 360 PG 361
Score = 28.3 bits (60), Expect = 8.0
Identities = 20/61 (32%), Positives = 20/61 (32%)
Frame = +1
Query: 709 PPXGGGWXXXXPXXKXPPPPPXKXPFXFXXPPXXXPPXXXXXXXPXXXXXXXXXSPPPPX 888
PP GG PPPPP P PP PP P PPPP
Sbjct: 328 PPPPGGLPPISGGPPPPPPPPGGCP-----PPPPPPPPGGFKGGP---------PPPPPP 373
Query: 889 G 891
G
Sbjct: 374 G 374
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 33.5 bits (73), Expect = 0.21
Identities = 21/65 (32%), Positives = 22/65 (33%)
Frame = +1
Query: 697 FFFXPPXGGGWXXXXPXXKXPPPPPXKXPFXFXXPPXXXPPXXXXXXXPXXXXXXXXXSP 876
FF PP G+ P PPPP F PP PP P P
Sbjct: 63 FFIPPPVPNGFIPPPPGPGGIPPPPPM--FAGGIPP---PPPMMGGIPPPPPMFGAPPPP 117
Query: 877 PPPXG 891
PPP G
Sbjct: 118 PPPSG 122
>U42830-3|AAC48275.1| 195|Caenorhabditis elegans Hypothetical
protein C53B7.2 protein.
Length = 195
Score = 33.5 bits (73), Expect = 0.21
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +2
Query: 191 CPQMAEPDCENPEVHDFVDHVGPCDVPQCFCDRPNVRNTKTGKCVPESEC 340
C QM P CE+P VD C P C C P + + +C+P + C
Sbjct: 38 CTQMCPPTCESPNPQCRVD----CTRPSCTC-LPGHVYSNSRQCIPANSC 82
>U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astacin
protease protein33 protein.
Length = 644
Score = 32.7 bits (71), Expect = 0.37
Identities = 19/65 (29%), Positives = 20/65 (30%), Gaps = 3/65 (4%)
Frame = +1
Query: 700 FFXPPXGGGWXXXXPXXKXPPPPPX---KXPFXFXXPPXXXPPXXXXXXXPXXXXXXXXX 870
FF P W P PPPP + P F PP P P
Sbjct: 20 FFERPPPPDWFFPGPLRPWGPPPPWHRNRGPPPFGPPPPWDRPPPPWRRPPWHRRPPWGL 79
Query: 871 SPPPP 885
PPPP
Sbjct: 80 PPPPP 84
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 32.3 bits (70), Expect = 0.49
Identities = 19/61 (31%), Positives = 19/61 (31%)
Frame = +1
Query: 709 PPXGGGWXXXXPXXKXPPPPPXKXPFXFXXPPXXXPPXXXXXXXPXXXXXXXXXSPPPPX 888
P G G P PPPP P PP PP P PPPP
Sbjct: 248 PLAGSGSPPPPPAAGSPPPPRTGSP---PPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPR 304
Query: 889 G 891
G
Sbjct: 305 G 305
Score = 28.3 bits (60), Expect = 8.0
Identities = 22/90 (24%), Positives = 24/90 (26%), Gaps = 1/90 (1%)
Frame = -2
Query: 893 PPLGG-GGEXXXXXXXXXGXXXXFXXGGXXXGGXKKXXGXFXGGGGGXFXXGXXXXHPPP 717
PP GG G G G G G F G G G PPP
Sbjct: 72 PPFGGFSGAPQGFGGNQGGFGGQTGFSGAPQGFGNNQQGGFGGNQGNQGGFGGRTGSPPP 131
Query: 716 XGGXKKKXXXXXVXKXXFXXXXGXSKXXXG 627
GG + F G S+ G
Sbjct: 132 FGGFSGAPQGFGGNQGGFGGQTGFSEAPQG 161
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 32.3 bits (70), Expect = 0.49
Identities = 19/61 (31%), Positives = 19/61 (31%)
Frame = +1
Query: 709 PPXGGGWXXXXPXXKXPPPPPXKXPFXFXXPPXXXPPXXXXXXXPXXXXXXXXXSPPPPX 888
P G G P PPPP P PP PP P PPPP
Sbjct: 269 PLAGSGSPPPPPAAGSPPPPRTGSP---PPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPR 325
Query: 889 G 891
G
Sbjct: 326 G 326
Score = 28.3 bits (60), Expect = 8.0
Identities = 22/90 (24%), Positives = 24/90 (26%), Gaps = 1/90 (1%)
Frame = -2
Query: 893 PPLGG-GGEXXXXXXXXXGXXXXFXXGGXXXGGXKKXXGXFXGGGGGXFXXGXXXXHPPP 717
PP GG G G G G G F G G G PPP
Sbjct: 93 PPFGGFSGAPQGFGGNQGGFGGQTGFSGAPQGFGNNQQGGFGGNQGNQGGFGGRTGSPPP 152
Query: 716 XGGXKKKXXXXXVXKXXFXXXXGXSKXXXG 627
GG + F G S+ G
Sbjct: 153 FGGFSGAPQGFGGNQGGFGGQTGFSEAPQG 182
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 32.3 bits (70), Expect = 0.49
Identities = 19/61 (31%), Positives = 19/61 (31%)
Frame = +1
Query: 709 PPXGGGWXXXXPXXKXPPPPPXKXPFXFXXPPXXXPPXXXXXXXPXXXXXXXXXSPPPPX 888
P G G P PPPP P PP PP P PPPP
Sbjct: 254 PLAGSGSPPPPPAAGSPPPPRTGSP---PPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPR 310
Query: 889 G 891
G
Sbjct: 311 G 311
Score = 28.3 bits (60), Expect = 8.0
Identities = 22/90 (24%), Positives = 24/90 (26%), Gaps = 1/90 (1%)
Frame = -2
Query: 893 PPLGG-GGEXXXXXXXXXGXXXXFXXGGXXXGGXKKXXGXFXGGGGGXFXXGXXXXHPPP 717
PP GG G G G G G F G G G PPP
Sbjct: 78 PPFGGFSGAPQGFGGNQGGFGGQTGFSGAPQGFGNNQQGGFGGNQGNQGGFGGRTGSPPP 137
Query: 716 XGGXKKKXXXXXVXKXXFXXXXGXSKXXXG 627
GG + F G S+ G
Sbjct: 138 FGGFSGAPQGFGGNQGGFGGQTGFSEAPQG 167
>Z81573-3|CAB04624.3| 398|Caenorhabditis elegans Hypothetical
protein M02G9.2 protein.
Length = 398
Score = 31.9 bits (69), Expect = 0.65
Identities = 25/89 (28%), Positives = 37/89 (41%), Gaps = 1/89 (1%)
Frame = +2
Query: 95 IVLLFVVAAVGYVTGQHFPTR-KCPKGEHSVLYCPQMAEPDCENPEVHDFVDHVGPCDVP 271
+V FV+A+V + + C GE C M P+ ++ + P P
Sbjct: 7 LVAFFVIASVQAIPQRTKRQNCDCTPGEAPKCGCQVMPTPEIGGGQM---ICTCSPPVPP 63
Query: 272 QCFCDRPNVRNTKTGKCVPESEC**NCVN 358
+C C NVRN TG +P NCV+
Sbjct: 64 KCVCTEGNVRNIITGPSLPALFKPYNCVS 92
>AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical
protein Y66H1A.4 protein.
Length = 244
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/48 (33%), Positives = 18/48 (37%)
Frame = -2
Query: 884 GGGGEXXXXXXXXXGXXXXFXXGGXXXGGXKKXXGXFXGGGGGXFXXG 741
GGGG G GG GG + G F GGG G + G
Sbjct: 8 GGGGGFRGGRGGGGGGGFRGGRGGDRGGGFRGGRGGFGGGGRGGYDQG 55
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/62 (30%), Positives = 19/62 (30%)
Frame = +1
Query: 709 PPXGGGWXXXXPXXKXPPPPPXKXPFXFXXPPXXXPPXXXXXXXPXXXXXXXXXSPPPPX 888
PP G PPPPP P P PP P PPPP
Sbjct: 545 PPIAGLLAANGTNVPIPPPPPPPLPQNLSGAPPPPPPPPPMLGGP--------PPPPPPP 596
Query: 889 GG 894
GG
Sbjct: 597 GG 598
>Z70212-9|CAA94168.1| 491|Caenorhabditis elegans Hypothetical
protein R04D3.1 protein.
Length = 491
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +2
Query: 83 MKSFIVLLFVVAAVGYVTGQHFPTRKCPKG 172
M ++L F VA VGY+ + RK PKG
Sbjct: 1 MSPLLILAFFVATVGYLVHFYLKVRKYPKG 30
>Z50742-6|CAA90619.1| 491|Caenorhabditis elegans Hypothetical
protein R04D3.1 protein.
Length = 491
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +2
Query: 83 MKSFIVLLFVVAAVGYVTGQHFPTRKCPKG 172
M ++L F VA VGY+ + RK PKG
Sbjct: 1 MSPLLILAFFVATVGYLVHFYLKVRKYPKG 30
>Z34533-1|CAA84302.3| 730|Caenorhabditis elegans Hypothetical
protein B0285.1 protein.
Length = 730
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +1
Query: 709 PPXGGGWXXXXPXXKXPPPPPXKXPFXFXXPPXXXPP 819
PP P PPPPP F PP PP
Sbjct: 190 PPPSFNINPFQPMFSQPPPPPLPPNSQFMTPPPRPPP 226
>U53148-3|AAB37077.1| 282|Caenorhabditis elegans Ground-like (grd
related) protein10 protein.
Length = 282
Score = 29.5 bits (63), Expect = 3.5
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +1
Query: 697 FFFXPPXGGGWXXXXPXXKXPPPPP 771
FFF GGG P PPPPP
Sbjct: 22 FFFGAAGGGGACGCAPRPACPPPPP 46
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 29.5 bits (63), Expect = 3.5
Identities = 19/72 (26%), Positives = 22/72 (30%), Gaps = 2/72 (2%)
Frame = +2
Query: 677 PPXXXXXFFXPPPXGXGGXGFXPXXKXPPPPXXXRXXFFXXPPXXF--PXXKXXXXPXXX 850
P F PPP G GF + PP + F PP F P + P
Sbjct: 311 PQQQQQQFGAPPPQGAPQQGFGAPPQGPPQGGPPQGSFGAPPPQQFHAPSPQSFGGPPPP 370
Query: 851 XXXXXXXLXPPP 886
PPP
Sbjct: 371 VSSAPGNFAPPP 382
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/50 (32%), Positives = 16/50 (32%), Gaps = 5/50 (10%)
Frame = +1
Query: 757 PPPPPXKXPFXFXXPPXXXP-----PXXXXXXXPXXXXXXXXXSPPPPXG 891
PPPP P F PP P P P PPPP G
Sbjct: 367 PPPPVSSAPGNFAPPPQSGPPGAFAPPPSAFGAPQGPGGPGGYGPPPPGG 416
>AC006636-3|AAF39799.1| 139|Caenorhabditis elegans Ground-like (grd
related) protein27 protein.
Length = 139
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = -1
Query: 777 FXXGGGGXFXXGXXPXPPXPXGGGKKK 697
F GGGG G P PP GG+KK
Sbjct: 22 FGMGGGGGCGCGAPPPPPACGCGGRKK 48
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.1 bits (62), Expect = 4.6
Identities = 15/45 (33%), Positives = 15/45 (33%)
Frame = +1
Query: 757 PPPPPXKXPFXFXXPPXXXPPXXXXXXXPXXXXXXXXXSPPPPXG 891
PPPPP P PP P P PPPP G
Sbjct: 264 PPPPPSVTPMP---PPMPPTPGMTPRPPPPPSSGMWPPPPPPPPG 305
Score = 28.7 bits (61), Expect = 6.0
Identities = 19/61 (31%), Positives = 20/61 (32%)
Frame = +1
Query: 709 PPXGGGWXXXXPXXKXPPPPPXKXPFXFXXPPXXXPPXXXXXXXPXXXXXXXXXSPPPPX 888
PP G W PPPPP + P P PP P PPPP
Sbjct: 290 PPSSGMWPPP------PPPPPGRTPGPPGMPGMPPPPPPSRFGPP----GMGGMPPPPPP 339
Query: 889 G 891
G
Sbjct: 340 G 340
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.1 bits (62), Expect = 4.6
Identities = 14/43 (32%), Positives = 16/43 (37%)
Frame = +1
Query: 757 PPPPPXKXPFXFXXPPXXXPPXXXXXXXPXXXXXXXXXSPPPP 885
PPPPP + P PP PP P +PP P
Sbjct: 139 PPPPPPRVP---RTPPPRSPPPRRPPMTPPSPQRRPPRTPPSP 178
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.1 bits (62), Expect = 4.6
Identities = 15/45 (33%), Positives = 15/45 (33%)
Frame = +1
Query: 757 PPPPPXKXPFXFXXPPXXXPPXXXXXXXPXXXXXXXXXSPPPPXG 891
PPPPP P PP P P PPPP G
Sbjct: 274 PPPPPSVTPMP---PPMPPTPGMTPRPPPPPSSGMWPPPPPPPPG 315
Score = 28.7 bits (61), Expect = 6.0
Identities = 19/61 (31%), Positives = 20/61 (32%)
Frame = +1
Query: 709 PPXGGGWXXXXPXXKXPPPPPXKXPFXFXXPPXXXPPXXXXXXXPXXXXXXXXXSPPPPX 888
PP G W PPPPP + P P PP P PPPP
Sbjct: 300 PPSSGMWPPP------PPPPPGRTPGPPGMPGMPPPPPPSRFGPP----GMGGMPPPPPP 349
Query: 889 G 891
G
Sbjct: 350 G 350
>Z83232-3|CAE46672.1| 381|Caenorhabditis elegans Hypothetical
protein K04B12.2b protein.
Length = 381
Score = 28.7 bits (61), Expect = 6.0
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +1
Query: 70 ENVSNEKFYCIVVCCGSCRLRHRATFS 150
+N+ +E+F+C+ CC RL T++
Sbjct: 196 KNLLDEEFFCLAPCCSGMRLFQAETYT 222
>Z83232-2|CAB05754.2| 420|Caenorhabditis elegans Hypothetical
protein K04B12.2a protein.
Length = 420
Score = 28.7 bits (61), Expect = 6.0
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +1
Query: 70 ENVSNEKFYCIVVCCGSCRLRHRATFS 150
+N+ +E+F+C+ CC RL T++
Sbjct: 235 KNLLDEEFFCLAPCCSGMRLFQAETYT 261
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.3 bits (60), Expect = 8.0
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = -2
Query: 890 PLGGGGEXXXXXXXXXGXXXXFXXGGXXXGGXKKXXGXFXGGGGGXFXXG 741
P GGGG G GG G G GGGGG G
Sbjct: 227 PSGGGGYATSGGGGSGGYATGGSSGGGYSSGGSSGGGYSTGGGGGYAGGG 276
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.3 bits (60), Expect = 8.0
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = -2
Query: 890 PLGGGGEXXXXXXXXXGXXXXFXXGGXXXGGXKKXXGXFXGGGGGXFXXG 741
P GGGG G GG G G GGGGG G
Sbjct: 227 PSGGGGYATSGGGGSGGYATGGSSGGGYSSGGSSGGGYSTGGGGGYAGGG 276
>U07628-1|AAA17738.1| 515|Caenorhabditis elegans APX-1 protein.
Length = 515
Score = 28.3 bits (60), Expect = 8.0
Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
Frame = +2
Query: 176 HSVLYCPQ-MAEPDCENPEVHDFVDHVGPCDVP-QCFCDRPNVRNTKTGKCVPESEC-** 346
H V C + DC NP + G C P QC C T+ +C+P + C
Sbjct: 158 HGVRRCSAGWSGEDCSNPICAGGCSNRGRCVAPNQCSC-ADGFNGTRCEQCLPRAGCVNG 216
Query: 347 NCVN 358
+CVN
Sbjct: 217 DCVN 220
>AF101319-2|AAC69353.4| 515|Caenorhabditis elegans Anterior pharynx
in excess protein1 protein.
Length = 515
Score = 28.3 bits (60), Expect = 8.0
Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
Frame = +2
Query: 176 HSVLYCPQ-MAEPDCENPEVHDFVDHVGPCDVP-QCFCDRPNVRNTKTGKCVPESEC-** 346
H V C + DC NP + G C P QC C T+ +C+P + C
Sbjct: 158 HGVRRCSAGWSGEDCSNPICAGGCSNRGRCVAPNQCSC-ADGFNGTRCEQCLPRAGCVNG 216
Query: 347 NCVN 358
+CVN
Sbjct: 217 DCVN 220
>AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical
protein H28G03.2c protein.
Length = 275
Score = 28.3 bits (60), Expect = 8.0
Identities = 13/41 (31%), Positives = 14/41 (34%)
Frame = +1
Query: 763 PPPXKXPFXFXXPPXXXPPXXXXXXXPXXXXXXXXXSPPPP 885
PPP P F PP PP P + PPP
Sbjct: 83 PPPGMGPPPFMPPPIGMPPPPLGMPPPHIGLGAAPYAVPPP 123
>AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical
protein H28G03.2b protein.
Length = 298
Score = 28.3 bits (60), Expect = 8.0
Identities = 13/41 (31%), Positives = 14/41 (34%)
Frame = +1
Query: 763 PPPXKXPFXFXXPPXXXPPXXXXXXXPXXXXXXXXXSPPPP 885
PPP P F PP PP P + PPP
Sbjct: 106 PPPGMGPPPFMPPPIGMPPPPLGMPPPHIGLGAAPYAVPPP 146
>AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical
protein H28G03.2a protein.
Length = 548
Score = 28.3 bits (60), Expect = 8.0
Identities = 13/41 (31%), Positives = 14/41 (34%)
Frame = +1
Query: 763 PPPXKXPFXFXXPPXXXPPXXXXXXXPXXXXXXXXXSPPPP 885
PPP P F PP PP P + PPP
Sbjct: 356 PPPGMGPPPFMPPPIGMPPPPLGMPPPHIGLGAAPYAVPPP 396
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,694,363
Number of Sequences: 27780
Number of extensions: 347993
Number of successful extensions: 1498
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 845
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1306
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2307803960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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