Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_B14
(1132 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 40 8e-04
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 36 0.008
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 36 0.010
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 34 0.032
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 31 0.22
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 31 0.39
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 30 0.68
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 28 2.1
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 28 2.8
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 26 8.4
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||Manual
Length = 309
Score = 39.5 bits (88), Expect = 8e-04
Identities = 24/66 (36%), Positives = 26/66 (39%), Gaps = 2/66 (3%)
Frame = +1
Query: 940 PPPPAXPPPXXXHXPPXRAGAPXXXXGGGAPXPXXPXPXXXXPP--PXXGGAXXPXPXXX 1113
PP P+ PPP PP + AP P P P PP P A P P
Sbjct: 144 PPRPSIPPPSPASAPPIPSKAPPIP--SSLPPPAQPAAPVKSPPSAPSLPSAVPPMP-PK 200
Query: 1114 XPPPPL 1131
PPPPL
Sbjct: 201 VPPPPL 206
Score = 27.9 bits (59), Expect = 2.8
Identities = 21/62 (33%), Positives = 21/62 (33%)
Frame = +1
Query: 937 PPPPPAXPPPXXXHXPPXRAGAPXXXXGGGAPXPXXPXPXXXXPPPXXGGAXXPXPXXXX 1116
PP PA P P PP AP P P P P PP A P P
Sbjct: 124 PPSAPAPPTPQSELRPP--TSAP--------PRPSIPPPSPASAPPIPSKA-PPIPSSLP 172
Query: 1117 PP 1122
PP
Sbjct: 173 PP 174
Score = 27.1 bits (57), Expect = 4.8
Identities = 16/55 (29%), Positives = 17/55 (30%), Gaps = 2/55 (3%)
Frame = +1
Query: 916 PXXXXXXPPPPPAXPPPXXXHXPPXRAGAP--XXXXGGGAPXPXXPXPXXXXPPP 1074
P PP P PP PP + AP P P P PPP
Sbjct: 151 PPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPP 205
Score = 26.2 bits (55), Expect = 8.4
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +1
Query: 937 PPPPPAXPPPXXXHXPPXRAG 999
PPPPPA P PP G
Sbjct: 6 PPPPPAPAPAAAAPAPPLMTG 26
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 273
Score = 36.3 bits (80), Expect = 0.008
Identities = 22/60 (36%), Positives = 22/60 (36%), Gaps = 1/60 (1%)
Frame = -2
Query: 1068 GGXXXGXGXXXXGRPPAPXXXGGARXXGGXVXXXGGR-XXGGGGGXXXTXXGGXPPXXGG 892
GG G G G PP P GG GG GG GGG G GG GG
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGG 246
Score = 35.9 bits (79), Expect = 0.010
Identities = 24/71 (33%), Positives = 24/71 (33%), Gaps = 8/71 (11%)
Frame = -3
Query: 1124 GGGXXXXGXGXXAPPXXGGGXXXXGX--------GXXGXGAPPPXXXLGAPARXGGXXXX 969
GGG G G PP GG G G G P G P GG
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGG 246
Query: 968 XGGGXAGGGGG 936
GGG G GGG
Sbjct: 247 FGGGLGGFGGG 257
Score = 33.9 bits (74), Expect = 0.042
Identities = 21/64 (32%), Positives = 21/64 (32%)
Frame = -3
Query: 1127 GGGGXXXXGXGXXAPPXXGGGXXXXGXGXXGXGAPPPXXXLGAPARXGGXXXXXGGGXAG 948
GGG G PP GG G G G G P G GGG G
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGG 246
Query: 947 GGGG 936
GGG
Sbjct: 247 FGGG 250
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 35.9 bits (79), Expect = 0.010
Identities = 20/63 (31%), Positives = 22/63 (34%)
Frame = +1
Query: 940 PPPPAXPPPXXXHXPPXRAGAPXXXXGGGAPXPXXPXPXXXXPPPXXGGAXXPXPXXXXP 1119
P PP+ PP PP + P G A P P P P A P P
Sbjct: 418 PTPPSLPPSAPPSLPP--SAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPA 475
Query: 1120 PPP 1128
PPP
Sbjct: 476 PPP 478
Score = 33.9 bits (74), Expect = 0.042
Identities = 20/65 (30%), Positives = 20/65 (30%), Gaps = 1/65 (1%)
Frame = +2
Query: 938 PPPPPXFLPPXXXTXPPXXRAPPXXXGAGGRPXXXXPXPXXXP-PXXXXGGRGXPPRXXX 1114
P P P LPP P P GA P P P P PP
Sbjct: 416 PVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPA 475
Query: 1115 PPPPP 1129
PPP P
Sbjct: 476 PPPAP 480
Score = 29.9 bits (64), Expect = 0.68
Identities = 18/72 (25%), Positives = 19/72 (26%)
Frame = +2
Query: 914 PPXXVXXXPPPPPXFLPPXXXTXPPXXRAPPXXXGAGGRPXXXXPXPXXXPPXXXXGGRG 1093
PP PPPPP P PP + P PP
Sbjct: 354 PPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTS 413
Query: 1094 XPPRXXXPPPPP 1129
PP P PP
Sbjct: 414 TPPVPTPPSLPP 425
Score = 29.1 bits (62), Expect = 1.2
Identities = 20/69 (28%), Positives = 21/69 (30%), Gaps = 5/69 (7%)
Frame = +1
Query: 940 PPPPAXPPPXXXHXPPXRAGAPXXXXGGGAPXPXXPXPXXXXPPPXXGGAXXPXPXXXXP 1119
PPPP P PP G+ P P PP A P P P
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAP 370
Query: 1120 -----PPPL 1131
PPPL
Sbjct: 371 STGRQPPPL 379
Score = 28.7 bits (61), Expect = 1.6
Identities = 21/82 (25%), Positives = 22/82 (26%), Gaps = 3/82 (3%)
Frame = +2
Query: 893 PPXXGGXPPXXVXXXPPP-PPXFLPPXXXT--XPPXXRAPPXXXGAGGRPXXXXPXPXXX 1063
P PP V P PP PP T PP P + P
Sbjct: 234 PSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLP 293
Query: 1064 PPXXXXGGRGXPPRXXXPPPPP 1129
PP PPPPP
Sbjct: 294 PPSSRVSAAALAANKKRPPPPP 315
Score = 26.6 bits (56), Expect = 6.4
Identities = 11/33 (33%), Positives = 12/33 (36%)
Frame = +1
Query: 490 PXPPXKXXPXGGXXKXGGGXXXGXFXXPPPPPK 588
P PP G G G PPPPP+
Sbjct: 312 PPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPR 344
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 34.3 bits (75), Expect = 0.032
Identities = 26/65 (40%), Positives = 26/65 (40%), Gaps = 1/65 (1%)
Frame = +1
Query: 937 PPPPPAXPPPXXXHXP-PXRAGAPXXXXGGGAPXPXXPXPXXXXPPPXXGGAXXPXPXXX 1113
PPPPPA P P P AP GG P P PPP GA P P
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIM---GGPPPPP--------PPPGVAGAGPPPP--- 778
Query: 1114 XPPPP 1128
PPPP
Sbjct: 779 PPPPP 783
Score = 33.5 bits (73), Expect = 0.055
Identities = 24/74 (32%), Positives = 26/74 (35%), Gaps = 3/74 (4%)
Frame = +2
Query: 914 PPXXVXXXPPPPPXFLPPXXXTX--PPXXRAPPXXXGAGGRPXXXXPXPXXXPPXXXXGG 1087
PP + P P P +PP PP PP GAG P P PP GG
Sbjct: 736 PPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAG------PPPPPPPPPAVSAGG 789
Query: 1088 -RGXPPRXXXPPPP 1126
R P P P
Sbjct: 790 SRYYAPAPQAEPEP 803
Score = 33.1 bits (72), Expect = 0.073
Identities = 20/59 (33%), Positives = 21/59 (35%)
Frame = +2
Query: 890 APPXXGGXPPXXVXXXPPPPPXFLPPXXXTXPPXXRAPPXXXGAGGRPXXXXPXPXXXP 1066
AP PP + PPPPP P PP PP AGG P P P
Sbjct: 745 APAPIPVPPPAPIMGGPPPPPP-PPGVAGAGPPPPPPPPPAVSAGG-SRYYAPAPQAEP 801
Score = 26.6 bits (56), Expect = 6.4
Identities = 19/70 (27%), Positives = 20/70 (28%), Gaps = 6/70 (8%)
Frame = +1
Query: 937 PPPP------PAXPPPXXXHXPPXRAGAPXXXXGGGAPXPXXPXPXXXXPPPXXGGAXXP 1098
PPPP PA P P G P G P P P GG+
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYY 793
Query: 1099 XPXXXXPPPP 1128
P P P
Sbjct: 794 APAPQAEPEP 803
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 31.5 bits (68), Expect = 0.22
Identities = 19/64 (29%), Positives = 20/64 (31%)
Frame = +1
Query: 937 PPPPPAXPPPXXXHXPPXRAGAPXXXXGGGAPXPXXPXPXXXXPPPXXGGAXXPXPXXXX 1116
P P P+ PP P A P G P P P P G P P
Sbjct: 1132 PVPVPSGAPPVPK---PSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGV 1188
Query: 1117 PPPP 1128
PP P
Sbjct: 1189 PPVP 1192
Score = 31.1 bits (67), Expect = 0.30
Identities = 19/64 (29%), Positives = 20/64 (31%)
Frame = +1
Query: 937 PPPPPAXPPPXXXHXPPXRAGAPXXXXGGGAPXPXXPXPXXXXPPPXXGGAXXPXPXXXX 1116
P P P+ PP P AP GAP P P G P P
Sbjct: 1113 PVPAPSGAPPV----PKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAA 1168
Query: 1117 PPPP 1128
PP P
Sbjct: 1169 PPVP 1172
Score = 30.7 bits (66), Expect = 0.39
Identities = 23/73 (31%), Positives = 25/73 (34%), Gaps = 10/73 (13%)
Frame = +1
Query: 943 PPPAXPPPXXXHXPPXRAGAPXXXXGGGAPX--------PXXPXPXXXXPP-PXXGGA-X 1092
PPP P P +GAP G P P P P PP P GA
Sbjct: 1063 PPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPP 1122
Query: 1093 XPXPXXXXPPPPL 1131
P P PP P+
Sbjct: 1123 VPKPSVAAPPVPV 1135
Score = 30.7 bits (66), Expect = 0.39
Identities = 17/62 (27%), Positives = 17/62 (27%)
Frame = +1
Query: 943 PPPAXPPPXXXHXPPXRAGAPXXXXGGGAPXPXXPXPXXXXPPPXXGGAXXPXPXXXXPP 1122
PP P PP P G P P P P G P P PP
Sbjct: 1179 PPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPP 1238
Query: 1123 PP 1128
P
Sbjct: 1239 VP 1240
Score = 30.3 bits (65), Expect = 0.52
Identities = 19/75 (25%), Positives = 20/75 (26%)
Frame = +1
Query: 907 GXXPXXXXXXPPPPPAXPPPXXXHXPPXRAGAPXXXXGGGAPXPXXPXPXXXXPPPXXGG 1086
G P PP P P AG P AP P PP
Sbjct: 1157 GAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTA 1216
Query: 1087 AXXPXPXXXXPPPPL 1131
P P PP P+
Sbjct: 1217 PPVPTPSAGLPPVPV 1231
Score = 29.5 bits (63), Expect = 0.90
Identities = 23/71 (32%), Positives = 24/71 (33%), Gaps = 7/71 (9%)
Frame = +1
Query: 937 PPPPPAXPPPXXXHXPPX---RAGAPXXXXGGGAPX---PXXPXPXXXXPPPXXGG-AXX 1095
P P A P P PP +GAP AP P P P P P G
Sbjct: 1035 PVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPV 1094
Query: 1096 PXPXXXXPPPP 1128
P P PP P
Sbjct: 1095 PKPSVAAPPVP 1105
Score = 29.5 bits (63), Expect = 0.90
Identities = 26/85 (30%), Positives = 27/85 (31%), Gaps = 7/85 (8%)
Frame = +2
Query: 896 PXXGGXPPXX---VXXXPPPPPXFLPPXXXTXPPXXRAPPXXXGAGGRPXXXXPXPXXXP 1066
P G PP V P P P PP P APP +G P P P
Sbjct: 1115 PAPSGAPPVPKPSVAAPPVPVPSGAPP---VPKPSVAAPPVPAPSGAPP---VPKPSVAA 1168
Query: 1067 PXXXXGGRGXP----PRXXXPPPPP 1129
P G P P PP PP
Sbjct: 1169 PPVPAPSSGIPPVPKPAAGVPPVPP 1193
Score = 29.5 bits (63), Expect = 0.90
Identities = 18/64 (28%), Positives = 19/64 (29%)
Frame = +1
Query: 937 PPPPPAXPPPXXXHXPPXRAGAPXXXXGGGAPXPXXPXPXXXXPPPXXGGAXXPXPXXXX 1116
P P P+ PP P A P G P P PP P P
Sbjct: 1151 PVPAPSGAPPVPK---PSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGV 1207
Query: 1117 PPPP 1128
PP P
Sbjct: 1208 PPVP 1211
Score = 29.1 bits (62), Expect = 1.2
Identities = 19/71 (26%), Positives = 19/71 (26%)
Frame = +2
Query: 914 PPXXVXXXPPPPPXFLPPXXXTXPPXXRAPPXXXGAGGRPXXXXPXPXXXPPXXXXGGRG 1093
PP PP P P PP A G P P P G
Sbjct: 1150 PPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPP 1209
Query: 1094 XPPRXXXPPPP 1126
PP PP P
Sbjct: 1210 VPPPSTAPPVP 1220
Score = 28.7 bits (61), Expect = 1.6
Identities = 17/60 (28%), Positives = 19/60 (31%)
Frame = +1
Query: 949 PAXPPPXXXHXPPXRAGAPXXXXGGGAPXPXXPXPXXXXPPPXXGGAXXPXPXXXXPPPP 1128
P+ PPP P + P GAP P P P P P PP P
Sbjct: 1060 PSAPPPV----PAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVP 1115
Score = 28.3 bits (60), Expect = 2.1
Identities = 22/64 (34%), Positives = 23/64 (35%), Gaps = 1/64 (1%)
Frame = +1
Query: 937 PPPPPAXPPPXXXHXPPXRAGAPXXXXGGGAPXPXXPXPXXXXPP-PXXGGAXXPXPXXX 1113
PPP PA P P +GAP G P P P PP P A P P
Sbjct: 1063 PPPVPA-PSSEIPSIPAP-SGAPPVPAPSG--IPPVPKPSVAAPPVPKPSVAVPPVPAPS 1118
Query: 1114 XPPP 1125
PP
Sbjct: 1119 GAPP 1122
Score = 27.5 bits (58), Expect = 3.6
Identities = 20/66 (30%), Positives = 22/66 (33%), Gaps = 1/66 (1%)
Frame = +1
Query: 937 PPPPPAXPPPXXXHXP-PXRAGAPXXXXGGGAPXPXXPXPXXXXPPPXXGGAXXPXPXXX 1113
P P P P P P +GAP A P P P P P A P P
Sbjct: 1117 PSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPV-PAPSGAPPVPKPSVAAPPVPAPS 1175
Query: 1114 XPPPPL 1131
PP+
Sbjct: 1176 SGIPPV 1181
Score = 27.5 bits (58), Expect = 3.6
Identities = 20/65 (30%), Positives = 21/65 (32%), Gaps = 2/65 (3%)
Frame = +1
Query: 937 PPPPPAXPPPXXXHXP-PXRAGAPXXXXGGGAPXPXXPXPXXXXPP-PXXGGAXXPXPXX 1110
P P P P P P +GAP A P P P PP P P P
Sbjct: 1136 PSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPV-PAPSSGIPPVPKPAAGVPPVPPP 1194
Query: 1111 XXPPP 1125
PP
Sbjct: 1195 SEAPP 1199
Score = 27.1 bits (57), Expect = 4.8
Identities = 20/64 (31%), Positives = 20/64 (31%), Gaps = 2/64 (3%)
Frame = +1
Query: 943 PPPAXPPPXXXHXPPXRAGAPXXXXGGGAPXPXXPXPXXXXPP-PXXGGA-XXPXPXXXX 1116
PP P P P GAP P P PP P GA P P
Sbjct: 1092 PPVPKPSVAAPPVPKPSVAVPPVPAPSGAPP--VPKPSVAAPPVPVPSGAPPVPKPSVAA 1149
Query: 1117 PPPP 1128
PP P
Sbjct: 1150 PPVP 1153
Score = 26.6 bits (56), Expect = 6.4
Identities = 20/78 (25%), Positives = 22/78 (28%), Gaps = 1/78 (1%)
Frame = +2
Query: 896 PXXGGXPPXXVXXXPPPPPXFLPPXXXTXPPXXRAPPXXXGAGGRPXXXXPXP-XXXPPX 1072
P G PP PP P P PP +G P P P PP
Sbjct: 1077 PAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPP---VPKPSVAAPPV 1133
Query: 1073 XXXGGRGXPPRXXXPPPP 1126
G P+ PP
Sbjct: 1134 PVPSGAPPVPKPSVAAPP 1151
Score = 26.2 bits (55), Expect = 8.4
Identities = 17/60 (28%), Positives = 17/60 (28%)
Frame = +1
Query: 946 PPAXPPPXXXHXPPXRAGAPXXXXGGGAPXPXXPXPXXXXPPPXXGGAXXPXPXXXXPPP 1125
PP P P AP A P P P P P A P P PP
Sbjct: 1083 PPVPAPSGIPPVPKPSVAAPPVPKPSVA-VPPVPAPSGAPPVPKPSVAAPPVPVPSGAPP 1141
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 30.7 bits (66), Expect = 0.39
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +2
Query: 914 PPXXVXXXPPPPPXFLPPXXXTXPPXXRAPP 1006
PP PPPPP +PP + PP PP
Sbjct: 1699 PPQMSAPTPPPPPMSVPP-PPSAPPMPAGPP 1728
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 29.9 bits (64), Expect = 0.68
Identities = 23/61 (37%), Positives = 23/61 (37%), Gaps = 1/61 (1%)
Frame = -2
Query: 1068 GGXXXGXGXXXXGRPPAPXXXGGARXXGGXVXXXGGR-XXGGGGGXXXTXXGGXPPXXGG 892
GG G G GR GGAR GG GGR GG G GG GG
Sbjct: 12 GGSRGGRGGFNGGRGGFGGGRGGAR-GGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGG 70
Query: 891 A 889
A
Sbjct: 71 A 71
Score = 28.7 bits (61), Expect = 1.6
Identities = 21/63 (33%), Positives = 21/63 (33%)
Frame = -2
Query: 1128 GGGGGXXXRGGXPRPPXXXXGGXXXGXGXXXXGRPPAPXXXGGARXXGGXVXXXGGRXXG 949
G GG RGG GG G G GGAR GG GGR
Sbjct: 10 GRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGAR--GGRGGSSGGRGGA 67
Query: 948 GGG 940
GG
Sbjct: 68 KGG 70
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 28.3 bits (60), Expect = 2.1
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +2
Query: 938 PPPPPXFLPPXXXTXPP 988
PPPPP F PP PP
Sbjct: 12 PPPPPGFEPPSQPPPPP 28
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 27.9 bits (59), Expect = 2.8
Identities = 19/64 (29%), Positives = 19/64 (29%)
Frame = +1
Query: 937 PPPPPAXPPPXXXHXPPXRAGAPXXXXGGGAPXPXXPXPXXXXPPPXXGGAXXPXPXXXX 1116
PPPPP PPP A P G PP P P
Sbjct: 189 PPPPP--PPPPAVEDQAADANEPDDYYSSGRAV------SPEIPPTYTPKQADPLPAPPP 240
Query: 1117 PPPP 1128
PPPP
Sbjct: 241 PPPP 244
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 26.2 bits (55), Expect = 8.4
Identities = 19/65 (29%), Positives = 20/65 (30%), Gaps = 1/65 (1%)
Frame = +2
Query: 938 PPPPPXFLP-PXXXTXPPXXRAPPXXXGAGGRPXXXXPXPXXXPPXXXXGGRGXPPRXXX 1114
PPPPP LP + P PP AG P P G P
Sbjct: 1883 PPPPPMALPKAGPPSAAPTSALPPAGPPAGATAISG--NPGMPAPVPLTGKETAVPLSSM 1940
Query: 1115 PPPPP 1129
P PP
Sbjct: 1941 PNAPP 1945
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,879,227
Number of Sequences: 5004
Number of extensions: 46075
Number of successful extensions: 292
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 174
length of database: 2,362,478
effective HSP length: 74
effective length of database: 1,992,182
effective search space used: 601638964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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