Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_B12
         (876 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF015905-1|ABM64216.1| 1255|Homo sapiens period 2 protein.             33   1.8  
AC012485-1|AAX88976.1| 1255|Homo sapiens unknown protein.              33   1.8  
AB002345-1|BAA20804.2| 1281|Homo sapiens KIAA0347 protein protein.     33   1.8  
AL359392-1|CAI40208.2| 1055|Homo sapiens LIM domain 7 protein.         31   4.1  
AL137782-2|CAI40006.2| 1055|Homo sapiens LIM domain 7 protein.         31   4.1  
AL137121-1|CAI39479.2| 1055|Homo sapiens LIM domain 7 protein.         31   4.1  
AF174600-1|AAF04521.1|  255|Homo sapiens F-box protein Fbx20 pro...    31   4.1  
AK024162-1|BAB14841.1|  217|Homo sapiens protein ( Homo sapiens ...    31   7.2  

>EF015905-1|ABM64216.1| 1255|Homo sapiens period 2 protein.
          Length = 1255

 Score = 32.7 bits (71), Expect = 1.8
 Identities = 24/74 (32%), Positives = 28/74 (37%)
 Frame = +3

Query: 642  PVPXPAAYRIPVRLSPLREXWXFLIXHAVGISVRCRSSLQXGLCAEPPVQPRPLAPYPG* 821
            P P PAAY +PV  +P          HA          LQ     +PP  P PLAP    
Sbjct: 847  PAPVPAAYSLPVFPAPGTVAAPPAPPHASFTVPAVPVDLQHQFAVQPPPFPAPLAPVMAF 906

Query: 822  LSSLXSQPG*XPXL 863
            +    S P   P L
Sbjct: 907  MLPSYSFPSGTPNL 920


>AC012485-1|AAX88976.1| 1255|Homo sapiens unknown protein.
          Length = 1255

 Score = 32.7 bits (71), Expect = 1.8
 Identities = 24/74 (32%), Positives = 28/74 (37%)
 Frame = +3

Query: 642  PVPXPAAYRIPVRLSPLREXWXFLIXHAVGISVRCRSSLQXGLCAEPPVQPRPLAPYPG* 821
            P P PAAY +PV  +P          HA          LQ     +PP  P PLAP    
Sbjct: 847  PAPVPAAYSLPVFPAPGTVAAPPAPPHASFTVPAVPVDLQHQFAVQPPPFPAPLAPVMAF 906

Query: 822  LSSLXSQPG*XPXL 863
            +    S P   P L
Sbjct: 907  MLPSYSFPSGTPNL 920


>AB002345-1|BAA20804.2| 1281|Homo sapiens KIAA0347 protein protein.
          Length = 1281

 Score = 32.7 bits (71), Expect = 1.8
 Identities = 24/74 (32%), Positives = 28/74 (37%)
 Frame = +3

Query: 642  PVPXPAAYRIPVRLSPLREXWXFLIXHAVGISVRCRSSLQXGLCAEPPVQPRPLAPYPG* 821
            P P PAAY +PV  +P          HA          LQ     +PP  P PLAP    
Sbjct: 873  PAPVPAAYSLPVFPAPGTVAAPPAPPHASFTVPAVPVDLQHQFAVQPPPFPAPLAPVMAF 932

Query: 822  LSSLXSQPG*XPXL 863
            +    S P   P L
Sbjct: 933  MLPSYSFPSGTPNL 946


>AL359392-1|CAI40208.2| 1055|Homo sapiens LIM domain 7 protein.
          Length = 1055

 Score = 31.5 bits (68), Expect = 4.1
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = +2

Query: 584 PDRTIKIPGVSPWKLPRALSCSXPCRLPDTCP 679
           PDR   +P   PW LP  +     C L  TCP
Sbjct: 210 PDRYHPVPFPEPWTLPPEIQAKFLCVLERTCP 241


>AL137782-2|CAI40006.2| 1055|Homo sapiens LIM domain 7 protein.
          Length = 1055

 Score = 31.5 bits (68), Expect = 4.1
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = +2

Query: 584 PDRTIKIPGVSPWKLPRALSCSXPCRLPDTCP 679
           PDR   +P   PW LP  +     C L  TCP
Sbjct: 210 PDRYHPVPFPEPWTLPPEIQAKFLCVLERTCP 241


>AL137121-1|CAI39479.2| 1055|Homo sapiens LIM domain 7 protein.
          Length = 1055

 Score = 31.5 bits (68), Expect = 4.1
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = +2

Query: 584 PDRTIKIPGVSPWKLPRALSCSXPCRLPDTCP 679
           PDR   +P   PW LP  +     C L  TCP
Sbjct: 210 PDRYHPVPFPEPWTLPPEIQAKFLCVLERTCP 241


>AF174600-1|AAF04521.1|  255|Homo sapiens F-box protein Fbx20
           protein.
          Length = 255

 Score = 31.5 bits (68), Expect = 4.1
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = +2

Query: 584 PDRTIKIPGVSPWKLPRALSCSXPCRLPDTCP 679
           PDR   +P   PW LP  +     C L  TCP
Sbjct: 84  PDRYHPVPFPEPWTLPPEIQAKFLCVLERTCP 115


>AK024162-1|BAB14841.1|  217|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14100 fis, clone MAMMA1000855. ).
          Length = 217

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 23/59 (38%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
 Frame = +3

Query: 600 RYQAFPPGSSLVRSPVPXPAAYRIPVRLSPLREXWXF--LIXHAVGISVRCRSSLQXGL 770
           R +AF PGS    S    P+  R+  R S L E W    L  H    S R   SLQ GL
Sbjct: 158 RKRAFRPGSENPSSGTSRPSRGRLEARSSGLDEAWEAQRLTGHGRFPSPRKEKSLQRGL 216


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,434,891
Number of Sequences: 237096
Number of extensions: 2846626
Number of successful extensions: 8450
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 7896
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8443
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11159604822
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)