Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_B11
         (916 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0553 - 4067921-4068180,4068437-4068455,4069101-4070225           32   0.73 
01_01_0487 - 3591171-3592313,3593522-3593800,3594688-3595008           32   0.73 
03_06_0471 + 34169562-34169892,34170121-34170347                       31   0.97 
02_04_0382 - 22501041-22501279,22501717-22501810                       29   3.9  
03_01_0023 + 198414-198968                                             29   5.2  
02_05_0962 + 33114226-33114684,33114806-33114853,33115166-331152...    29   6.8  
06_03_0874 - 25580417-25580419,25580504-25580604,25580828-255814...    28   9.0  
04_04_1182 + 31531426-31531702,31533741-31533997,31534672-315348...    28   9.0  
01_01_0083 + 631196-631675                                             28   9.0  

>01_01_0553 - 4067921-4068180,4068437-4068455,4069101-4070225
          Length = 467

 Score = 31.9 bits (69), Expect = 0.73
 Identities = 12/19 (63%), Positives = 12/19 (63%)
 Frame = +2

Query: 761 GGGXGXGFSXXXXNPPPPP 817
           GGG G GFS     PPPPP
Sbjct: 22  GGGGGGGFSPTAAKPPPPP 40


>01_01_0487 - 3591171-3592313,3593522-3593800,3594688-3595008
          Length = 580

 Score = 31.9 bits (69), Expect = 0.73
 Identities = 22/69 (31%), Positives = 28/69 (40%), Gaps = 3/69 (4%)
 Frame = +1

Query: 154 PVRVVENADSGNGYEPIDNRPYIVNPPKDYNPNGNGYEPI---DNGAYYVDRPQGRPYFK 324
           P    +  +    Y P  + P  V PP  Y P  +G  P     N + Y + P GRP   
Sbjct: 381 PPAAPQQPEEAMSYAPPQSYPPNVRPPSPYMPPPSGPAPPFYGQNQSMY-EPPVGRPNSG 439

Query: 325 PTPFPGARG 351
           P P  GA G
Sbjct: 440 PPPSYGAGG 448


>03_06_0471 + 34169562-34169892,34170121-34170347
          Length = 185

 Score = 31.5 bits (68), Expect = 0.97
 Identities = 17/50 (34%), Positives = 21/50 (42%)
 Frame = +1

Query: 193 YEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDRPQGRPYFKPTPFPG 342
           Y P    P    PP  Y P+  GY P   GAY       +P + P  +PG
Sbjct: 56  YPPAGGYPGAQYPPSGYPPSQGGYPP---GAYPPSGYPQQPGYPPAGYPG 102


>02_04_0382 - 22501041-22501279,22501717-22501810
          Length = 110

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 22/79 (27%), Positives = 34/79 (43%)
 Frame = +1

Query: 118 VLALLAMANAQDPVRVVENADSGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVD 297
           +LA   +A+A+      +N      +E     P   +PP    P+ + Y+P  +  YY D
Sbjct: 19  LLAAAFVASAEQTHDDGDNPPESPDHEDPPPSPEYYDPP----PSPDYYDPPHSPDYY-D 73

Query: 298 RPQGRPYFKPTPFPGARGG 354
            P    Y+ P P P   GG
Sbjct: 74  PPPSPDYYDPPPSPYYGGG 92


>03_01_0023 + 198414-198968
          Length = 184

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 14/35 (40%), Positives = 15/35 (42%)
 Frame = -1

Query: 910 PXPXGXGGPGGXXXGGKREKGXXKXKTXXXPGGGG 806
           P P G GG GG   GG   +G          GGGG
Sbjct: 33  PSPGGGGGGGGGGGGGGGGRGGGGGSGGGSGGGGG 67


>02_05_0962 +
           33114226-33114684,33114806-33114853,33115166-33115286,
           33115760-33116008,33116149-33116302,33116493-33116985,
           33117524-33117596,33118285-33118343
          Length = 551

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = +2

Query: 761 GGGXGXGFSXXXXNPPPPP 817
           GGG G GF      PPPPP
Sbjct: 54  GGGGGGGFLRLRSAPPPPP 72


>06_03_0874 -
           25580417-25580419,25580504-25580604,25580828-25581411,
           25581523-25581594,25581667-25581793,25583412-25583516,
           25583643-25583676
          Length = 341

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 18/51 (35%), Positives = 23/51 (45%)
 Frame = +1

Query: 184 GNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDRPQGRPYFKPTPF 336
           G  Y+P   R     PP+   P    Y P   G  Y  +PQG+PY  P P+
Sbjct: 247 GETYQPQPQRE--TYPPQ---PQVQPYPPKPQGQPYPPQPQGQPY-PPQPY 291


>04_04_1182 +
           31531426-31531702,31533741-31533997,31534672-31534818,
           31535974-31536111
          Length = 272

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 11/21 (52%), Positives = 11/21 (52%)
 Frame = +2

Query: 752 GPXGGGXGXGFSXXXXNPPPP 814
           GP GGG G G       PPPP
Sbjct: 49  GPGGGGGGGGGMGIPPRPPPP 69


>01_01_0083 + 631196-631675
          Length = 159

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 12/25 (48%), Positives = 12/25 (48%), Gaps = 1/25 (4%)
 Frame = -2

Query: 819 PGGGGGXXXXXEKPXPXPP-PXGPW 748
           P GGGG       P P PP P  PW
Sbjct: 94  PAGGGGGGGGFNYPAPPPPNPIVPW 118


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,990,074
Number of Sequences: 37544
Number of extensions: 473358
Number of successful extensions: 1410
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1115
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1352
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2600672280
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)