Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_B09
         (879 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK128825-1|BAC87626.1|  230|Homo sapiens protein ( Homo sapiens ...    32   2.4  
BC072021-1|AAH72021.1|  227|Homo sapiens CTBP1 protein protein.        31   4.2  

>AK128825-1|BAC87626.1|  230|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46268 fis, clone TESTI4027262. ).
          Length = 230

 Score = 32.3 bits (70), Expect = 2.4
 Identities = 35/110 (31%), Positives = 40/110 (36%), Gaps = 6/110 (5%)
 Frame = +3

Query: 540 PPERASQKSTLKSXVAKPDRTIKIPGVSPLEAPSCALPGSXPCRL----PDTCP--PFLP 701
           PP          S  + P   +  P   PL   S +LPG  P R     PD+ P    LP
Sbjct: 25  PPPACVSHCRPPSPDSAPRTVVLPPRTLPLSVSS-SLPGLCPSRCRPPSPDSAPLGVVLP 83

Query: 702 FREAXRFSHSSRLVRYXQFRC*VGSPPKLGLCCTQPPRFSPEPVGXFIPG 851
            R     S SS L      RC   SP    L    PPR  P  V   +PG
Sbjct: 84  PRTLP-LSVSSSLPGLCPSRCRPPSPDSAPLGVVLPPRTLPLSVSSSLPG 132


>BC072021-1|AAH72021.1|  227|Homo sapiens CTBP1 protein protein.
          Length = 227

 Score = 31.5 bits (68), Expect = 4.2
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = -3

Query: 724 EKRHASRKGRKGGQVSGKRQGSEPGRAXEGASR 626
           E RH   + + GG+ SG+R+G    RA  GA+R
Sbjct: 5   ETRHGGGQAQAGGRSSGRRRGRPTRRARGGAAR 37


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,101,360
Number of Sequences: 237096
Number of extensions: 3021754
Number of successful extensions: 16134
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13567
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16084
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11215125244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)