Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_B08
(865 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0088 - 31562596-31563096 32 0.68
01_01_1044 + 8231933-8231941,8232091-8232166,8232423-8232871 31 1.2
08_02_1211 - 25319143-25320150,25320793-25321363,25321544-25321947 31 1.6
07_03_0329 + 16840051-16840917,16840999-16841342,16841444-168415... 31 1.6
04_04_1641 + 34993807-34994589,34994924-34995022,34995521-349956... 31 1.6
04_04_0824 - 28399144-28399385,28400193-28400312,28400422-284004... 31 1.6
04_03_0904 + 20717005-20718087 31 1.6
10_08_1037 - 22477358-22478752 30 2.1
01_06_1598 + 38535077-38535368,38536381-38536463,38536575-385366... 30 2.7
04_03_0098 + 11183039-11183752 29 3.6
05_01_0521 + 4500268-4500283,4500364-4500680,4500999-4501094,450... 29 4.8
05_06_0078 - 25412770-25413852 29 6.3
12_02_0640 - 21447470-21448309 28 8.4
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095... 28 8.4
06_01_0145 + 1092764-1093351 28 8.4
>03_06_0088 - 31562596-31563096
Length = 166
Score = 31.9 bits (69), Expect = 0.68
Identities = 17/35 (48%), Positives = 19/35 (54%)
Frame = -1
Query: 733 EXGATXPEGEXGRTGIR*AAGVGTRESARGELXGG 629
+ GA G GR G R AAG G R ARG + GG
Sbjct: 79 QLGARGASGGGGRFGARGAAGGGGRFGARGAVGGG 113
>01_01_1044 + 8231933-8231941,8232091-8232166,8232423-8232871
Length = 177
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = +2
Query: 629 PPXKLPSCALPGSDPCRLPDTCPPXLP 709
PP P C LP PC LP CPP P
Sbjct: 131 PPPCPPPCPLPCPPPCPLP--CPPPCP 155
>08_02_1211 - 25319143-25320150,25320793-25321363,25321544-25321947
Length = 660
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/53 (32%), Positives = 21/53 (39%)
Frame = -2
Query: 855 GIKXPAGSGLKRGXSGNTSPGXGXGRTXTRELEXPYQGEGMRXXPRXPKGXKG 697
G K GSG K+G + +T PG GR R P R P +G
Sbjct: 606 GRKEAGGSGSKKGAAASTPPGRRIGRPPKRAAAPPTPPPSKRAKDDKPTRKRG 658
>07_03_0329 +
16840051-16840917,16840999-16841342,16841444-16841574,
16841671-16841792,16841877-16841983,16842104-16842236,
16842342-16842458,16842560-16842667,16842716-16842742,
16842759-16842830,16843462-16843584,16843671-16843833,
16844140-16844264,16844355-16844489,16844574-16844677,
16844772-16844834,16844930-16844993,16845186-16845318,
16845414-16845487,16845603-16845697,16845799-16845830,
16846201-16846355
Length = 1097
Score = 30.7 bits (66), Expect = 1.6
Identities = 23/72 (31%), Positives = 29/72 (40%), Gaps = 2/72 (2%)
Frame = -2
Query: 837 GSGLKRGXSGNTSPGX--GXGRTXTRELEXPYQGEGMRXXPRXPKGXKGGQVSGKRQGSE 664
G G +RG G G G G Y G+G R R G GG G +G +
Sbjct: 95 GRGYQRGMEGGGGRGGYRGDGDGGYGRGGGGYHGDGERGYGRGGGGGGGG--GGGYRGDD 152
Query: 663 PGRAHEGSXQGG 628
GR+ G +GG
Sbjct: 153 EGRSSYGRARGG 164
>04_04_1641 +
34993807-34994589,34994924-34995022,34995521-34995648,
34996095-34996235,34996456-34996542,34996627-34996780,
34998569-34998628,34999019-34999447,34999524-34999819,
35000278-35000407,35000690-35001187
Length = 934
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +3
Query: 669 TPAAYRIPVRPXSPSGXVAPFSYPHPGRVXPVPV 770
+PAA +P +P P APF P P P PV
Sbjct: 13 SPAAAVLPPKPFKPLSSAAPFRRPSPPPPPPSPV 46
>04_04_0824 -
28399144-28399385,28400193-28400312,28400422-28400453,
28400531-28400625,28400713-28400786,28400883-28401018,
28401096-28401333,28401508-28401555,28401593-28401780,
28401862-28401983,28402061-28402226,28402321-28402443,
28403068-28403139,28403244-28403351,28404212-28404328,
28404458-28404596,28404702-28404808,28404904-28405013,
28405141-28405274,28405348-28405497,28405571-28405791,
28405868-28406677,28410261-28410473
Length = 1254
Score = 30.7 bits (66), Expect = 1.6
Identities = 25/74 (33%), Positives = 28/74 (37%)
Frame = -2
Query: 849 KXPAGSGLKRGXSGNTSPGXGXGRTXTRELEXPYQGEGMRXXPRXPKGXKGGQVSGKRQG 670
K GSG G S +PG + R P Q G R G GGQ G R G
Sbjct: 85 KKRTGSG-STGESSGEAPGAPGHGSSQRAERGPQQHGGGRGWVPQHGGRGGGQYQG-RGG 142
Query: 669 SEPGRAHEGSXQGG 628
GR +GS G
Sbjct: 143 HYQGRGGQGSHHPG 156
>04_03_0904 + 20717005-20718087
Length = 360
Score = 30.7 bits (66), Expect = 1.6
Identities = 18/61 (29%), Positives = 23/61 (37%)
Frame = +3
Query: 666 PTPAAYRIPVRPXSPSGXVAPFSYPHPGRVXPVPVLXSFXSQXRGWCCPXPPVSTPXXLG 845
PTP Y+ +P +P P P P P P S+ Q + P P TP
Sbjct: 141 PTPPTYKPQPKP-TPPPTYKPQPKPTPTPYTPTPTPPSYKPQPKPTPTPYTPTPTPPSYK 199
Query: 846 P 848
P
Sbjct: 200 P 200
>10_08_1037 - 22477358-22478752
Length = 464
Score = 30.3 bits (65), Expect = 2.1
Identities = 19/58 (32%), Positives = 24/58 (41%)
Frame = +3
Query: 660 LVPTPAAYRIPVRPXSPSGXVAPFSYPHPGRVXPVPVLXSFXSQXRGWCCPXPPVSTP 833
L+P P A R+P+ P PS P H P L S CC PP+ +P
Sbjct: 112 LLPLPCASRLPLAP--PSTPTPPIRRLHALPFLPGLRLASPPRPIAPPCCSPPPIPSP 167
>01_06_1598 +
38535077-38535368,38536381-38536463,38536575-38536643,
38537127-38537182,38537275-38537354,38537496-38537578,
38537682-38537759,38538133-38538201,38538366-38538434,
38538520-38538566,38538656-38538746,38538839-38538892
Length = 356
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = -1
Query: 706 EXGRTGIR*AAGVGTRESARGELXGG 629
E GRTG R A+G G R ARG GG
Sbjct: 28 EGGRTGARGASGGGGRLGARGAAGGG 53
>04_03_0098 + 11183039-11183752
Length = 237
Score = 29.5 bits (63), Expect = 3.6
Identities = 21/70 (30%), Positives = 24/70 (34%)
Frame = -2
Query: 837 GSGLKRGXSGNTSPGXGXGRTXTRELEXPYQGEGMRXXPRXPKGXKGGQVSGKRQGSEPG 658
G G G G + G G G + QG G G GG SG QG G
Sbjct: 166 GGGAGGGSGGGGASGGGSGTGRSGNAVGTGQGSGSA---NGGTGSGGGSGSGSGQGGSAG 222
Query: 657 RAHEGSXQGG 628
G+ GG
Sbjct: 223 GGGGGAGSGG 232
>05_01_0521 +
4500268-4500283,4500364-4500680,4500999-4501094,
4501219-4501296,4501333-4501557,4502842-4502910,
4502946-4503200
Length = 351
Score = 29.1 bits (62), Expect = 4.8
Identities = 21/68 (30%), Positives = 28/68 (41%), Gaps = 3/68 (4%)
Frame = -2
Query: 852 IKXPAGSGLKRGXSGNTSPGX---GXGRTXTRELEXPYQGEGMRXXPRXPKGXKGGQVSG 682
++ P G G RG G G G GR R + +G R P+G GG+ G
Sbjct: 1 MRPPRGRGFGRGGGGRGDGGGRGGGGGRGFGRVGDSGGRGGRGGRGGRTPRGRGGGRGGG 60
Query: 681 KRQGSEPG 658
R G + G
Sbjct: 61 GRGGMKGG 68
>05_06_0078 - 25412770-25413852
Length = 360
Score = 28.7 bits (61), Expect = 6.3
Identities = 23/74 (31%), Positives = 30/74 (40%), Gaps = 2/74 (2%)
Frame = -2
Query: 843 PAGSGLKRGXSGNTSPGXGXGRTXTRELEXPYQGEGMRXXPRXPKGXKGGQV--SGKRQG 670
P G G+K G G + G G G +RE G+G G GG V +G G
Sbjct: 39 PGGDGVKIGRDGGATDGDGEG-DGSRE-----AGDGAGGDRAGGSGVGGGFVVGAGAASG 92
Query: 669 SEPGRAHEGSXQGG 628
G G+ +GG
Sbjct: 93 GWEGTVGGGAGEGG 106
>12_02_0640 - 21447470-21448309
Length = 279
Score = 28.3 bits (60), Expect = 8.4
Identities = 13/27 (48%), Positives = 18/27 (66%), Gaps = 4/27 (14%)
Frame = -2
Query: 723 PRXPKGXKGGQVSGKRQG----SEPGR 655
PR +G +GG+ G+RQG S+PGR
Sbjct: 129 PRSSRGGRGGRGGGRRQGGGLCSQPGR 155
>10_08_0940 -
21708557-21708733,21709058-21709142,21709330-21709551,
21710640-21710815,21711883-21711946,21712433-21712507,
21715114-21715199,21715297-21716715
Length = 767
Score = 28.3 bits (60), Expect = 8.4
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Frame = +1
Query: 301 NESAN---ARGEAVCVLGALPLPRSLTRCAR 384
+ESAN AR EAV +G +P+ L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464
>06_01_0145 + 1092764-1093351
Length = 195
Score = 28.3 bits (60), Expect = 8.4
Identities = 26/78 (33%), Positives = 30/78 (38%)
Frame = -2
Query: 855 GIKXPAGSGLKRGXSGNTSPGXGXGRTXTRELEXPYQGEGMRXXPRXPKGXKGGQVSGKR 676
G P G G K G G+ PG GR G G R R +G +GG SG
Sbjct: 103 GNAGPGGVGGKGGPGGDGGPGGIGGRGGDGGC-GGVGGRG-RKGGRGGRGGRGG--SGGF 158
Query: 675 QGSEPGRAHEGSXQGGXR 622
G + GR G G R
Sbjct: 159 GGGDGGRGGRGGDGGEGR 176
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,817,237
Number of Sequences: 37544
Number of extensions: 415482
Number of successful extensions: 1325
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1236
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1320
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2420970504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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