Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_B08
         (865 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81120-1|CAB03342.1|  207|Caenorhabditis elegans Hypothetical pr...    31   0.80 
Z70309-6|CAA94360.1|  324|Caenorhabditis elegans Hypothetical pr...    31   0.80 
Z71178-2|CAA94875.1|  297|Caenorhabditis elegans Hypothetical pr...    30   1.9  
Z68507-1|CAA92826.1|  337|Caenorhabditis elegans Hypothetical pr...    30   1.9  
Z54238-1|CAA90992.2|  281|Caenorhabditis elegans Hypothetical pr...    29   3.2  
Z80215-14|CAI79138.1|  662|Caenorhabditis elegans Hypothetical p...    28   9.9  
Z80215-13|CAI79137.1|  640|Caenorhabditis elegans Hypothetical p...    28   9.9  
Z80215-12|CAB02277.1|  652|Caenorhabditis elegans Hypothetical p...    28   9.9  

>Z81120-1|CAB03342.1|  207|Caenorhabditis elegans Hypothetical
           protein T12D8.2 protein.
          Length = 207

 Score = 31.5 bits (68), Expect = 0.80
 Identities = 22/69 (31%), Positives = 28/69 (40%)
 Frame = -2

Query: 834 SGLKRGXSGNTSPGXGXGRTXTRELEXPYQGEGMRXXPRXPKGXKGGQVSGKRQGSEPGR 655
           SGL     GN        R   R+      G G R      +G +G    G R+G E GR
Sbjct: 71  SGLNGADFGNRV--LKVNRAQQRDRSDRGGGRGGRGGNFGDRGGRGRGAGGFRRGGEGGR 128

Query: 654 AHEGSXQGG 628
            +EG  +GG
Sbjct: 129 FNEGERRGG 137


>Z70309-6|CAA94360.1|  324|Caenorhabditis elegans Hypothetical
           protein R102.6 protein.
          Length = 324

 Score = 31.5 bits (68), Expect = 0.80
 Identities = 12/27 (44%), Positives = 13/27 (48%)
 Frame = +2

Query: 629 PPXKLPSCALPGSDPCRLPDTCPPXLP 709
           PP   P C  P   PC +P  CPP  P
Sbjct: 243 PPPPSPVCMPPPPPPCPMPIPCPPPPP 269


>Z71178-2|CAA94875.1|  297|Caenorhabditis elegans Hypothetical
           protein B0024.2 protein.
          Length = 297

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 21/75 (28%), Positives = 28/75 (37%)
 Frame = -2

Query: 855 GIKXPAGSGLKRGXSGNTSPGXGXGRTXTRELEXPYQGEGMRXXPRXPKGXKGGQVSGKR 676
           G   P G   +RG SG+  P           ++ P Q  G    PR P G  G      R
Sbjct: 106 GPPGPPGRPGQRGTSGSPGPRGQDNHQVHAPIQCPRQQPGCVKCPRGPAGPTGSIGQAGR 165

Query: 675 QGSEPGRAHEGSXQG 631
            G + GR  +   +G
Sbjct: 166 PGPD-GRPGQPGRKG 179


>Z68507-1|CAA92826.1|  337|Caenorhabditis elegans Hypothetical
           protein M18.1 protein.
          Length = 337

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 21/70 (30%), Positives = 27/70 (38%), Gaps = 2/70 (2%)
 Frame = -2

Query: 858 PGIKXPAGSGLKRGXSGNTSPGXGXGRTXTRELEXPYQGEGMRXXPRXPKGXKG--GQVS 685
           PG + PAG   + G  GN       G   TR +  P  G      P+ P G  G  GQ  
Sbjct: 176 PGPQGPAGDNGQPGRPGNDGRPGAPGAPGTRSVGRP--GTAGSPGPQGPPGQNGNDGQPG 233

Query: 684 GKRQGSEPGR 655
                 +PG+
Sbjct: 234 NDGAPGQPGQ 243


>Z54238-1|CAA90992.2|  281|Caenorhabditis elegans Hypothetical
           protein T28C6.1 protein.
          Length = 281

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = -2

Query: 708 GXKGGQVSGKRQGSEPGRAHEGSXQGGXR 622
           G +GG   G + GS+ G  ++G  QGG R
Sbjct: 212 GGQGGSQGGSQGGSQGGWGNQGGQQGGGR 240


>Z80215-14|CAI79138.1|  662|Caenorhabditis elegans Hypothetical
           protein C36B1.12c protein.
          Length = 662

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = -2

Query: 528 RQQRGLFTVPGLXLAFCSHVLSCV-IPLILWITV 430
           RQ      +  + +A C HVL C+ +P + WI++
Sbjct: 391 RQPYAFILLDVINMALCMHVLKCLRLPSLKWISI 424


>Z80215-13|CAI79137.1|  640|Caenorhabditis elegans Hypothetical
           protein C36B1.12b protein.
          Length = 640

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = -2

Query: 528 RQQRGLFTVPGLXLAFCSHVLSCV-IPLILWITV 430
           RQ      +  + +A C HVL C+ +P + WI++
Sbjct: 391 RQPYAFILLDVINMALCMHVLKCLRLPSLKWISI 424


>Z80215-12|CAB02277.1|  652|Caenorhabditis elegans Hypothetical
           protein C36B1.12a protein.
          Length = 652

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = -2

Query: 528 RQQRGLFTVPGLXLAFCSHVLSCV-IPLILWITV 430
           RQ      +  + +A C HVL C+ +P + WI++
Sbjct: 391 RQPYAFILLDVINMALCMHVLKCLRLPSLKWISI 424


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,287,715
Number of Sequences: 27780
Number of extensions: 310598
Number of successful extensions: 906
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 788
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 903
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2160943708
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)