BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_B06
(876 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U19927-1|AAC50140.1| 502|Homo sapiens WAS protein. 31 4.1
U12707-1|AAA62663.1| 502|Homo sapiens Wiskott-Aldrich syndrome ... 31 4.1
BC023532-1|AAH23532.1| 641|Homo sapiens WW domain binding prote... 31 4.1
BC016441-1|AAH16441.2| 400|Homo sapiens WBP11 protein protein. 31 4.1
BC012738-1|AAH12738.1| 502|Homo sapiens Wiskott-Aldrich syndrom... 31 4.1
BC002961-1|AAH02961.1| 514|Homo sapiens WAS protein protein. 31 4.1
BC001621-1|AAH01621.1| 641|Homo sapiens WW domain binding prote... 31 4.1
AF118023-1|AAD30425.1| 641|Homo sapiens SH3 domain-binding prot... 31 4.1
AF115549-1|AAD26691.1| 502|Homo sapiens Wiskott-Aldrich Syndrom... 31 4.1
AB029309-1|BAA88410.1| 641|Homo sapiens Npw38-binding protein N... 31 4.1
AK127078-1|BAC86815.1| 844|Homo sapiens protein ( Homo sapiens ... 31 5.5
>U19927-1|AAC50140.1| 502|Homo sapiens WAS protein.
Length = 502
Score = 31.5 bits (68), Expect = 4.1
Identities = 24/73 (32%), Positives = 26/73 (35%)
Frame = +2
Query: 653 PPPXXKGXXKXXXXGKLGXPXPXXXPPFXPXKNXLPPXXXXXFXXSPXPGGGXXXXFPPL 832
PPP +G G+ G P P PP LPP P PG G PP
Sbjct: 352 PPPTPRGPPPP---GRGGPPPPP--PPATGRSGPLPP---------PPPGAGGPPMPPPP 397
Query: 833 XXPPXPPGXXXFP 871
PP PP P
Sbjct: 398 PPPPPPPSSGNGP 410
>U12707-1|AAA62663.1| 502|Homo sapiens Wiskott-Aldrich syndrome
protein protein.
Length = 502
Score = 31.5 bits (68), Expect = 4.1
Identities = 24/73 (32%), Positives = 26/73 (35%)
Frame = +2
Query: 653 PPPXXKGXXKXXXXGKLGXPXPXXXPPFXPXKNXLPPXXXXXFXXSPXPGGGXXXXFPPL 832
PPP +G G+ G P P PP LPP P PG G PP
Sbjct: 352 PPPTPRGPPPP---GRGGPPPPP--PPATGRSGPLPP---------PPPGAGGPPMPPPP 397
Query: 833 XXPPXPPGXXXFP 871
PP PP P
Sbjct: 398 PPPPPPPSSGNGP 410
>BC023532-1|AAH23532.1| 641|Homo sapiens WW domain binding protein
11 protein.
Length = 641
Score = 31.5 bits (68), Expect = 4.1
Identities = 22/71 (30%), Positives = 23/71 (32%), Gaps = 2/71 (2%)
Frame = +2
Query: 650 GPPPXXKGXXKXXXXGKLGXPXPXXXPPFXPXKNXL--PPXXXXXFXXSPXPGGGXXXXF 823
GPPP + L P P PP P PP P P G
Sbjct: 433 GPPPGAPPFLRPPGMPGLRGPLPRLLPPGPPPGRPPGPPPGPPPGLPPGPPPRGP----- 487
Query: 824 PPLXXPPXPPG 856
PP PP PPG
Sbjct: 488 PPRLPPPAPPG 498
>BC016441-1|AAH16441.2| 400|Homo sapiens WBP11 protein protein.
Length = 400
Score = 31.5 bits (68), Expect = 4.1
Identities = 22/71 (30%), Positives = 23/71 (32%), Gaps = 2/71 (2%)
Frame = +2
Query: 650 GPPPXXKGXXKXXXXGKLGXPXPXXXPPFXPXKNXL--PPXXXXXFXXSPXPGGGXXXXF 823
GPPP + L P P PP P PP P P G
Sbjct: 192 GPPPGAPPFLRPPGMPGLRGPLPRLLPPGPPPGRPPGPPPGPPPGLPPGPPPRGP----- 246
Query: 824 PPLXXPPXPPG 856
PP PP PPG
Sbjct: 247 PPRLPPPAPPG 257
>BC012738-1|AAH12738.1| 502|Homo sapiens Wiskott-Aldrich syndrome
(eczema-thrombocytopenia) protein.
Length = 502
Score = 31.5 bits (68), Expect = 4.1
Identities = 24/73 (32%), Positives = 26/73 (35%)
Frame = +2
Query: 653 PPPXXKGXXKXXXXGKLGXPXPXXXPPFXPXKNXLPPXXXXXFXXSPXPGGGXXXXFPPL 832
PPP +G G+ G P P PP LPP P PG G PP
Sbjct: 352 PPPTPRGPPPP---GRGGPPPPP--PPATGRSGPLPP---------PPPGAGGPPMPPPP 397
Query: 833 XXPPXPPGXXXFP 871
PP PP P
Sbjct: 398 PPPPPPPSSGNGP 410
>BC002961-1|AAH02961.1| 514|Homo sapiens WAS protein protein.
Length = 514
Score = 31.5 bits (68), Expect = 4.1
Identities = 24/73 (32%), Positives = 26/73 (35%)
Frame = +2
Query: 653 PPPXXKGXXKXXXXGKLGXPXPXXXPPFXPXKNXLPPXXXXXFXXSPXPGGGXXXXFPPL 832
PPP +G G+ G P P PP LPP P PG G PP
Sbjct: 364 PPPTPRGPPPP---GRGGPPPPP--PPATGRSGPLPP---------PPPGAGGPPMPPPP 409
Query: 833 XXPPXPPGXXXFP 871
PP PP P
Sbjct: 410 PPPPPPPSSGNGP 422
>BC001621-1|AAH01621.1| 641|Homo sapiens WW domain binding protein
11 protein.
Length = 641
Score = 31.5 bits (68), Expect = 4.1
Identities = 22/71 (30%), Positives = 23/71 (32%), Gaps = 2/71 (2%)
Frame = +2
Query: 650 GPPPXXKGXXKXXXXGKLGXPXPXXXPPFXPXKNXL--PPXXXXXFXXSPXPGGGXXXXF 823
GPPP + L P P PP P PP P P G
Sbjct: 433 GPPPGAPPFLRPPGMPGLRGPLPRLLPPGPPPGRPPGPPPGPPPGLPPGPPPRGP----- 487
Query: 824 PPLXXPPXPPG 856
PP PP PPG
Sbjct: 488 PPRLPPPAPPG 498
>AF118023-1|AAD30425.1| 641|Homo sapiens SH3 domain-binding protein
SNP70 protein.
Length = 641
Score = 31.5 bits (68), Expect = 4.1
Identities = 22/71 (30%), Positives = 23/71 (32%), Gaps = 2/71 (2%)
Frame = +2
Query: 650 GPPPXXKGXXKXXXXGKLGXPXPXXXPPFXPXKNXL--PPXXXXXFXXSPXPGGGXXXXF 823
GPPP + L P P PP P PP P P G
Sbjct: 433 GPPPGAPPFLRPPGMPGLRGPLPRLLPPGPPPGRPPGPPPGPPPGLPPGPPPRGP----- 487
Query: 824 PPLXXPPXPPG 856
PP PP PPG
Sbjct: 488 PPRLPPPAPPG 498
>AF115549-1|AAD26691.1| 502|Homo sapiens Wiskott-Aldrich Syndrome
protein protein.
Length = 502
Score = 31.5 bits (68), Expect = 4.1
Identities = 24/73 (32%), Positives = 26/73 (35%)
Frame = +2
Query: 653 PPPXXKGXXKXXXXGKLGXPXPXXXPPFXPXKNXLPPXXXXXFXXSPXPGGGXXXXFPPL 832
PPP +G G+ G P P PP LPP P PG G PP
Sbjct: 352 PPPTPRGPPPP---GRGGPPPPP--PPATGRSGPLPP---------PPPGAGGPPMPPPP 397
Query: 833 XXPPXPPGXXXFP 871
PP PP P
Sbjct: 398 PPPPPPPSSGNGP 410
>AB029309-1|BAA88410.1| 641|Homo sapiens Npw38-binding protein
NpwBP protein.
Length = 641
Score = 31.5 bits (68), Expect = 4.1
Identities = 22/71 (30%), Positives = 23/71 (32%), Gaps = 2/71 (2%)
Frame = +2
Query: 650 GPPPXXKGXXKXXXXGKLGXPXPXXXPPFXPXKNXL--PPXXXXXFXXSPXPGGGXXXXF 823
GPPP + L P P PP P PP P P G
Sbjct: 433 GPPPGAPPFLRPPGMPGLRGPLPRLLPPGPPPGRPPGPPPGPPPGLPPGPPPRGP----- 487
Query: 824 PPLXXPPXPPG 856
PP PP PPG
Sbjct: 488 PPRLPPPAPPG 498
>AK127078-1|BAC86815.1| 844|Homo sapiens protein ( Homo sapiens
cDNA FLJ45135 fis, clone BRAWH3038252, highly similar
to Formin 1 isoform IV. ).
Length = 844
Score = 31.1 bits (67), Expect = 5.5
Identities = 18/54 (33%), Positives = 19/54 (35%), Gaps = 5/54 (9%)
Frame = +2
Query: 710 PXPXXXPPFXPXKNX-----LPPXXXXXFXXSPXPGGGXXXXFPPLXXPPXPPG 856
P P PP P + PP P PGG PP PP PPG
Sbjct: 330 PPPPPPPPLPPPSSAGPPPPPPPPPLPNSPAPPNPGGPPPAPPPPGLAPPPPPG 383
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,497,621
Number of Sequences: 237096
Number of extensions: 1999970
Number of successful extensions: 2884
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2199
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2737
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11159604822
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -