Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_B04
         (876 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    25   0.78 
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    22   5.5  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    22   5.5  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   9.6  

>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 25.0 bits (52), Expect = 0.78
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -3

Query: 121 LYVTIRPVPMGGMRAV*GSEGGKG 50
           ++V +  V +  MRA+ G EGGKG
Sbjct: 168 VFVLMEEVVLREMRAIVGFEGGKG 191


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
 Frame = -1

Query: 450 HLQDQGGEIDFAPQGHLG--SAASCLQTEHPLR 358
           H    GGE+   P  H+G    A+  Q E+ L+
Sbjct: 394 HYSGDGGEVAHLPNTHMGHEPGAAYYQNENMLQ 426


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
 Frame = -1

Query: 450 HLQDQGGEIDFAPQGHLG--SAASCLQTEHPLR 358
           H    GGE+   P  H+G    A+  Q E+ L+
Sbjct: 342 HYSGDGGEVAHLPNTHMGHEPGAAYYQNENMLQ 374


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 12/42 (28%), Positives = 18/42 (42%)
 Frame = -2

Query: 194 FDNIFENLVERQQSRIELVTKITNSLRNDPSSADGRDASGMR 69
           FDNI +NL+     R E       S +  P+  +  D   +R
Sbjct: 182 FDNIMKNLICEIDGRHEFFLAEFKSAKTPPNKLNCYDLRRVR 223


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,867
Number of Sequences: 336
Number of extensions: 4381
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24203322
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)