Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_B04
         (876 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0510 - 21615724-21615909,21615992-21616075,21616164-216162...    31   0.92 
04_03_0027 + 9667508-9668800                                           29   4.9  

>06_03_0510 -
           21615724-21615909,21615992-21616075,21616164-21616217,
           21616324-21616371,21616529-21616611,21616963-21617113,
           21617648-21617785,21617966-21618094,21618391-21618596,
           21618734-21618845,21619145-21619204,21619331-21619429,
           21619520-21619575,21620230-21620313,21621407-21621500
          Length = 527

 Score = 31.5 bits (68), Expect = 0.92
 Identities = 20/74 (27%), Positives = 32/74 (43%)
 Frame = +2

Query: 548 IRIPVGAETLXRIINVIGEPIDERGSIPTDKTAAIHAXAPEFVDMSVXHEXLXTGIKVVX 727
           ++ PV  + L RI N  G+PID    I  +    I   +    + +   E + TGI  + 
Sbjct: 133 LKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTID 192

Query: 728 LLPPYAXRAXIGLF 769
           ++   A    I LF
Sbjct: 193 VMNSIARGQKIPLF 206


>04_03_0027 + 9667508-9668800
          Length = 430

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 13/52 (25%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
 Frame = -2

Query: 287 SGSSHQ*CFFSSIVYYCLGSQTAYSADSRKHF-DNIFENLVERQQSRIELVT 135
           + + H    F  I++ C G+     +D   HF D  F+N ++   ++  +VT
Sbjct: 299 ANTKHAHRMFDEIIFPCFGTPRTVISDGGSHFIDKTFQNFLQELGAQHNIVT 350


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,334,287
Number of Sequences: 37544
Number of extensions: 487297
Number of successful extensions: 1203
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1168
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1203
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)