Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_B03
(867 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92812-8|CAB07275.1| 337|Caenorhabditis elegans Hypothetical pr... 69 4e-12
Z80344-2|CAB02487.3| 608|Caenorhabditis elegans Hypothetical pr... 39 0.005
AF016448-1|AAB65956.2| 477|Caenorhabditis elegans Temporarily a... 38 0.009
Z70750-3|CAA94738.1| 374|Caenorhabditis elegans Hypothetical pr... 37 0.016
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 30 2.5
Z27078-8|CAH04706.2| 1446|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z27078-2|CAA81588.3| 788|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical pr... 29 4.3
U51997-1|AAG24067.1| 572|Caenorhabditis elegans Activated in bl... 29 4.3
AF125960-2|AAD14736.1| 478|Caenorhabditis elegans Hypothetical ... 29 5.7
U40799-9|AAA81488.2| 1292|Caenorhabditis elegans Hypothetical pr... 28 9.9
>Z92812-8|CAB07275.1| 337|Caenorhabditis elegans Hypothetical
protein T03E6.7 protein.
Length = 337
Score = 68.9 bits (161), Expect = 4e-12
Identities = 51/172 (29%), Positives = 84/172 (48%)
Frame = +2
Query: 257 EEWSAFKLQHRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYGDMLH 436
E+W +K Y SE E+ M+ + ++ I HN+ + +G ++++G+N D+
Sbjct: 30 EKWDDYKEDFDKEY-SESEEQTYMEAFVKNMIHIENHNRDHRLGRKTFEMGLNHIADLPF 88
Query: 437 HEFVKTMNGFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEQVDWRKHXAVTDIKEPRE 616
++ K +NG+ + ++ +K S F++P NV++P++VDWR VTD+K
Sbjct: 89 SQYRK-LNGYRRLFGDSR---IKNSS----SFLAPFNVQVPDEVDWRDTHLVTDVKNQGM 140
Query: 617 VWLMPXPSARLGALEXQHFPSVRLPAVXLGSQNXIDXSEPXREPTAATGGLM 772
SA GALE QH + V L QN +D S GGLM
Sbjct: 141 CGSCWAFSA-TGALEGQHARKLG-QLVSLSEQNLVDCSTKYGN-HGCNGGLM 189
>Z80344-2|CAB02487.3| 608|Caenorhabditis elegans Hypothetical
protein F15D4.4 protein.
Length = 608
Score = 38.7 bits (86), Expect = 0.005
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Frame = +2
Query: 269 AFK-LQHRLNYESEVEDNF-RMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYGDMLHHE 442
AFK L +N+ S ++ R +Y++ K + +HN YE+G+ SYK+ N++ L E
Sbjct: 134 AFKSLMDVINFNSTAKEGLKRFNVYSKVKKEVDEHNIMYELGMSSYKMSTNQFSVALDGE 193
>AF016448-1|AAB65956.2| 477|Caenorhabditis elegans Temporarily
assigned gene nameprotein 196 protein.
Length = 477
Score = 37.9 bits (84), Expect = 0.009
Identities = 29/108 (26%), Positives = 49/108 (45%)
Frame = +2
Query: 281 QHRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYGDMLHHEFVKTMN 460
+H Y ++ E R +++ ++ +I + QK E G Y G K+ DM EF K M
Sbjct: 180 RHEKKYTNKREVLKRFRVFKKNAKVI-RELQKNEQGTAVY--GFTKFSDMTTMEFKKIML 236
Query: 461 GFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEQVDWRKHXAVTDIK 604
+ + + +Y + ++ LPE DWR+ AVT +K
Sbjct: 237 PY----QWEQPVYPMEQANFEKHDVTINEEDLPESFDWREKGAVTQVK 280
>Z70750-3|CAA94738.1| 374|Caenorhabditis elegans Hypothetical
protein C50F4.3 protein.
Length = 374
Score = 37.1 bits (82), Expect = 0.016
Identities = 20/80 (25%), Positives = 40/80 (50%)
Frame = +2
Query: 257 EEWSAFKLQHRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYGDMLH 436
+E+ F ++++ NY+ E+E FR + + + + K N+ + K G+NK+ D+
Sbjct: 45 KEFEDFIVKYKRNYKDEIEKKFRFQQFVATHNRVGKMNKAAKKAGHDTKYGINKFSDLSK 104
Query: 437 HEFVKTMNGFNKTAKHNKNL 496
E + F K+N N+
Sbjct: 105 KEIHGMYSKFG-PPKNNTNV 123
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 29.9 bits (64), Expect = 2.5
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +1
Query: 346 QAHHRQTQPEVRNGPRFLQAGHEQ-VRRHAPPRVREDY 456
Q HH+Q Q ++ PR + H Q RRH P DY
Sbjct: 187 QQHHQQQQQQLAFRPRHRSSHHHQEPRRHRAPSPDPDY 224
>Z27078-8|CAH04706.2| 1446|Caenorhabditis elegans Hypothetical protein
K04H4.2c protein.
Length = 1446
Score = 29.5 bits (63), Expect = 3.3
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 5/64 (7%)
Frame = -1
Query: 678 DGKCCXSKAPSRAEGXGMSHTSLGSLMSVTAXCFLQSTCSGSFTLAGDMNLA-----PRT 514
+GKCC +PS + G+ + S + + CF +C + +NL P+T
Sbjct: 1295 NGKCC---SPSSNKPAGLLQSKCPSGDTAVSGCFPNGSCGTGYECVSSLNLCCPPGQPQT 1351
Query: 513 LPPF 502
P F
Sbjct: 1352 FPSF 1355
>Z27078-2|CAA81588.3| 788|Caenorhabditis elegans Hypothetical
protein K04H4.2b protein.
Length = 788
Score = 29.5 bits (63), Expect = 3.3
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 5/64 (7%)
Frame = -1
Query: 678 DGKCCXSKAPSRAEGXGMSHTSLGSLMSVTAXCFLQSTCSGSFTLAGDMNLA-----PRT 514
+GKCC +PS + G+ + S + + CF +C + +NL P+T
Sbjct: 637 NGKCC---SPSSNKPAGLLQSKCPSGDTAVSGCFPNGSCGTGYECVSSLNLCCPPGQPQT 693
Query: 513 LPPF 502
P F
Sbjct: 694 FPSF 697
>Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical
protein AC3.4 protein.
Length = 425
Score = 29.1 bits (62), Expect = 4.3
Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
Frame = -2
Query: 506 PSCTDSCCVWQFCXXXXXXXRTRGGACLRTCS--CPACKK-RGPFRTSGCVWR*CACAQR 336
P C SC Q C + AC ++CS C A + + P +T C+C Q
Sbjct: 357 PQCQQSC--QQQCVQQQQPMQQCAPACTQSCSQSCSAAQPAQMPCQTQSV--NSCSCQQN 412
Query: 335 ISSCGN 318
S CGN
Sbjct: 413 YSPCGN 418
>Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical
protein AC3.3 protein.
Length = 425
Score = 29.1 bits (62), Expect = 4.3
Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
Frame = -2
Query: 506 PSCTDSCCVWQFCXXXXXXXRTRGGACLRTCS--CPACKK-RGPFRTSGCVWR*CACAQR 336
P C SC Q C + AC ++CS C A + + P +T C+C Q
Sbjct: 357 PQCQQSC--QQQCVQQQQPMQQCAPACTQSCSQSCSAAQPAQMPCQTQSV--NSCSCQQN 412
Query: 335 ISSCGN 318
S CGN
Sbjct: 413 YSPCGN 418
>U51997-1|AAG24067.1| 572|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 2 protein.
Length = 572
Score = 29.1 bits (62), Expect = 4.3
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
Frame = -2
Query: 506 PSCTDSCCVWQFCXXXXXXXRTRGGACLRTCSCPACKKRGPFRTSGCVWR*---CACAQR 336
P C SC Q C + AC ++CS +C P + C+ + C+C Q
Sbjct: 504 PQCQQSC--QQQCIQQLQPIQQCATACTQSCS-QSCSAAQPAQMP-CITQSANSCSCQQN 559
Query: 335 ISSCGN 318
S CGN
Sbjct: 560 YSPCGN 565
>AF125960-2|AAD14736.1| 478|Caenorhabditis elegans Hypothetical
protein T12B3.2 protein.
Length = 478
Score = 28.7 bits (61), Expect = 5.7
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -1
Query: 480 LAVLLKPFIVFTNSWWSMSPYLFMPSL*ETR-PISYFWL 367
+ ++L PF+ + N+WWS + + + L ISYF+L
Sbjct: 408 IGMILAPFLTYANTWWSPAVNVTVIVLGSANLLISYFFL 446
>U40799-9|AAA81488.2| 1292|Caenorhabditis elegans Hypothetical
protein F42C5.10 protein.
Length = 1292
Score = 27.9 bits (59), Expect = 9.9
Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +3
Query: 750 RLPRG-GSWDHXLQVHQGPXGASTXE 824
RLP+G G WDH L V++ G+ E
Sbjct: 132 RLPQGHGEWDHELAVYEEDGGSGLLE 157
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,483,793
Number of Sequences: 27780
Number of extensions: 356338
Number of successful extensions: 1073
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1012
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1070
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2171433726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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