Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_A24
         (842 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0610 - 25449085-25453284                                         29   3.5  
11_01_0687 - 5651002-5651453,5651535-5651951,5652621-5653338,565...    29   3.5  
10_08_0095 + 14760292-14760624,14760689-14761000,14761768-147624...    29   3.5  
07_03_0462 + 18444928-18444999,18446948-18447985,18448015-184488...    28   8.1  

>11_06_0610 - 25449085-25453284
          Length = 1399

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 24/48 (50%), Positives = 29/48 (60%)
 Frame = -3

Query: 369  KTLVP*A*PVSLPRSSLKISLL*PAFPKSPSSFCPKVPKTLPPPICLS 226
            K+L P A PVSLP   +K SL  P  P +P S  P V K+LPPP  +S
Sbjct: 1262 KSLPPPA-PVSLPPPPVK-SL--P--PPAPVSLPPPVVKSLPPPAPVS 1303


>11_01_0687 -
           5651002-5651453,5651535-5651951,5652621-5653338,
           5654106-5654417,5654482-5654814
          Length = 743

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 27/72 (37%), Positives = 29/72 (40%), Gaps = 3/72 (4%)
 Frame = +2

Query: 197 SRRHPRDVTWDKQMGGGKVFGTLGQNDDGLFGKAGYNREIFNDDRGKLTG-QAYGTRVLG 373
           SR H    TW KQ  GGK  G  G    G  G  G  R  +       TG Q YG  V  
Sbjct: 387 SRSHYIVQTWQKQF-GGKGAGGQGGGQPGYEGGTGQQR--YGVGAPPPTGQQGYGGGVPP 443

Query: 374 P--GGDSTNYGG 403
           P   G  T +GG
Sbjct: 444 PTCSGGHTGFGG 455


>10_08_0095 +
           14760292-14760624,14760689-14761000,14761768-14762489,
           14762905-14763187,14763419-14763650,14763736-14764187
          Length = 777

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 27/72 (37%), Positives = 29/72 (40%), Gaps = 3/72 (4%)
 Frame = +2

Query: 197 SRRHPRDVTWDKQMGGGKVFGTLGQNDDGLFGKAGYNREIFNDDRGKLTG-QAYGTRVLG 373
           SR H    TW KQ  GGK  G  G    G  G  G  R  +       TG Q YG  V  
Sbjct: 387 SRSHYIVQTWQKQF-GGKGAGGQGGGQPGYEGGTGQQR--YGVGAPPPTGQQGYGGGVPP 443

Query: 374 P--GGDSTNYGG 403
           P   G  T +GG
Sbjct: 444 PTCSGGHTGFGG 455


>07_03_0462 +
           18444928-18444999,18446948-18447985,18448015-18448845,
           18449112-18449120
          Length = 649

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 15/30 (50%), Positives = 16/30 (53%)
 Frame = +2

Query: 353 YGTRVLGPGGDSTNYGGRLDWGEQECTSHY 442
           YGT VLG GG S  Y G+LD G       Y
Sbjct: 79  YGT-VLGKGGFSVVYKGKLDNGRSVAVKQY 107


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,503,469
Number of Sequences: 37544
Number of extensions: 481542
Number of successful extensions: 1332
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1280
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1329
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2338704516
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)