Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_A24
(842 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M31661-1|AAA60174.1| 622|Homo sapiens prolactin receptor protein. 34 0.56
BC059392-1|AAH59392.1| 622|Homo sapiens prolactin receptor prot... 34 0.56
AF493069-1|AAM11661.1| 217|Homo sapiens delta 4-SF1b truncated ... 34 0.56
AF416619-1|AAL23915.1| 376|Homo sapiens prolactin receptor shor... 34 0.56
AF416618-1|AAL23914.1| 288|Homo sapiens prolactin receptor shor... 34 0.56
AF349939-1|AAK32703.1| 521|Homo sapiens prolactin receptor isof... 34 0.56
AF166329-1|AAD49855.1| 349|Homo sapiens intermediate prolactin ... 34 0.56
AF091870-1|AAD32032.1| 622|Homo sapiens prolactin receptor prot... 34 0.56
S78505-1|AAB34470.1| 206|Homo sapiens prolactin receptor protein. 31 4.0
S56138-1|AAA14245.1| 748|Homo sapiens choline acetyltransferase... 31 6.9
S45018-1|AAB23557.2| 559|Homo sapiens choline acetyltransferase... 31 6.9
BC130617-1|AAI30618.1| 630|Homo sapiens CHAT protein protein. 31 6.9
BC130615-1|AAI30616.1| 630|Homo sapiens CHAT protein protein. 31 6.9
AF493068-1|AAM11660.1| 197|Homo sapiens delta 4-delta 7/11 trun... 31 6.9
AF492470-1|AAM18048.1| 268|Homo sapiens prolactin receptor delt... 31 6.9
AF305909-1|AAK08955.1| 630|Homo sapiens choline acetyltransfera... 31 6.9
AF305908-1|AAK08954.1| 666|Homo sapiens choline acetyltransfera... 31 6.9
AF305907-1|AAK08953.1| 748|Homo sapiens choline acetyltransfera... 31 6.9
AF305906-3|AAK08952.1| 630|Homo sapiens choline acetyltransfera... 31 6.9
AF305906-2|AAK08951.1| 666|Homo sapiens choline acetyltransfera... 31 6.9
AF305906-1|AAK08950.1| 748|Homo sapiens choline acetyltransfera... 31 6.9
>M31661-1|AAA60174.1| 622|Homo sapiens prolactin receptor protein.
Length = 622
Score = 34.3 bits (75), Expect = 0.56
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = -2
Query: 652 HIGQQIIV*VLRXSPNHGRISAWSPTSXLL*PNSFETIPPAEKWV 518
H GQ+ +V V R P+HG SAWSP + + P+ F T+ W+
Sbjct: 197 HPGQKYLVQV-RCKPDHGYWSAWSPATFIQIPSDF-TMNDTTVWI 239
>BC059392-1|AAH59392.1| 622|Homo sapiens prolactin receptor
protein.
Length = 622
Score = 34.3 bits (75), Expect = 0.56
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = -2
Query: 652 HIGQQIIV*VLRXSPNHGRISAWSPTSXLL*PNSFETIPPAEKWV 518
H GQ+ +V V R P+HG SAWSP + + P+ F T+ W+
Sbjct: 197 HPGQKYLVQV-RCKPDHGYWSAWSPATFIQIPSDF-TMNDTTVWI 239
>AF493069-1|AAM11661.1| 217|Homo sapiens delta 4-SF1b truncated
prolactin receptor protein.
Length = 217
Score = 34.3 bits (75), Expect = 0.56
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = -2
Query: 652 HIGQQIIV*VLRXSPNHGRISAWSPTSXLL*PNSFETIPPAEKWV 518
H GQ+ +V V R P+HG SAWSP + + P+ F T+ W+
Sbjct: 126 HPGQKYLVQV-RCKPDHGYWSAWSPATFIQIPSDF-TMNDTTVWI 168
>AF416619-1|AAL23915.1| 376|Homo sapiens prolactin receptor short
isoform 1a protein.
Length = 376
Score = 34.3 bits (75), Expect = 0.56
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = -2
Query: 652 HIGQQIIV*VLRXSPNHGRISAWSPTSXLL*PNSFETIPPAEKWV 518
H GQ+ +V V R P+HG SAWSP + + P+ F T+ W+
Sbjct: 197 HPGQKYLVQV-RCKPDHGYWSAWSPATFIQIPSDF-TMNDTTVWI 239
>AF416618-1|AAL23914.1| 288|Homo sapiens prolactin receptor short
isoform 1b protein.
Length = 288
Score = 34.3 bits (75), Expect = 0.56
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = -2
Query: 652 HIGQQIIV*VLRXSPNHGRISAWSPTSXLL*PNSFETIPPAEKWV 518
H GQ+ +V V R P+HG SAWSP + + P+ F T+ W+
Sbjct: 197 HPGQKYLVQV-RCKPDHGYWSAWSPATFIQIPSDF-TMNDTTVWI 239
>AF349939-1|AAK32703.1| 521|Homo sapiens prolactin receptor isoform
delta S1 precursor protein.
Length = 521
Score = 34.3 bits (75), Expect = 0.56
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = -2
Query: 652 HIGQQIIV*VLRXSPNHGRISAWSPTSXLL*PNSFETIPPAEKWV 518
H GQ+ +V V R P+HG SAWSP + + P+ F T+ W+
Sbjct: 96 HPGQKYLVQV-RCKPDHGYWSAWSPATFIQIPSDF-TMNDTTVWI 138
>AF166329-1|AAD49855.1| 349|Homo sapiens intermediate prolactin
receptor isoform protein.
Length = 349
Score = 34.3 bits (75), Expect = 0.56
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = -2
Query: 652 HIGQQIIV*VLRXSPNHGRISAWSPTSXLL*PNSFETIPPAEKWV 518
H GQ+ +V V R P+HG SAWSP + + P+ F T+ W+
Sbjct: 197 HPGQKYLVQV-RCKPDHGYWSAWSPATFIQIPSDF-TMNDTTVWI 239
>AF091870-1|AAD32032.1| 622|Homo sapiens prolactin receptor
protein.
Length = 622
Score = 34.3 bits (75), Expect = 0.56
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = -2
Query: 652 HIGQQIIV*VLRXSPNHGRISAWSPTSXLL*PNSFETIPPAEKWV 518
H GQ+ +V V R P+HG SAWSP + + P+ F T+ W+
Sbjct: 197 HPGQKYLVQV-RCKPDHGYWSAWSPATFIQIPSDF-TMNDTTVWI 239
>S78505-1|AAB34470.1| 206|Homo sapiens prolactin receptor protein.
Length = 206
Score = 31.5 bits (68), Expect = 4.0
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = -2
Query: 652 HIGQQIIV*VLRXSPNHGRISAWSPTSXLL*PNSF 548
H GQ+ +V V R P+HG SAWSP + + P+++
Sbjct: 173 HPGQKYLVQV-RCKPDHGYWSAWSPATFIQIPSAW 206
>S56138-1|AAA14245.1| 748|Homo sapiens choline acetyltransferase
protein.
Length = 748
Score = 30.7 bits (66), Expect = 6.9
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +3
Query: 210 LVTSLGTNKWGEARSLALWDKTMMDSLEKL 299
L+TS G ++W EAR++ + D T DSL+ +
Sbjct: 352 LLTSDGRSEWAEARTVLVKDSTNRDSLDMI 381
>S45018-1|AAB23557.2| 559|Homo sapiens choline acetyltransferase
protein.
Length = 559
Score = 30.7 bits (66), Expect = 6.9
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +3
Query: 210 LVTSLGTNKWGEARSLALWDKTMMDSLEKL 299
L+TS G ++W EAR++ + D T DSL+ +
Sbjct: 242 LLTSDGRSEWAEARTVLVKDSTNRDSLDMI 271
>BC130617-1|AAI30618.1| 630|Homo sapiens CHAT protein protein.
Length = 630
Score = 30.7 bits (66), Expect = 6.9
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +3
Query: 210 LVTSLGTNKWGEARSLALWDKTMMDSLEKL 299
L+TS G ++W EAR++ + D T DSL+ +
Sbjct: 234 LLTSDGRSEWAEARTVLVKDSTNRDSLDMI 263
>BC130615-1|AAI30616.1| 630|Homo sapiens CHAT protein protein.
Length = 630
Score = 30.7 bits (66), Expect = 6.9
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +3
Query: 210 LVTSLGTNKWGEARSLALWDKTMMDSLEKL 299
L+TS G ++W EAR++ + D T DSL+ +
Sbjct: 234 LLTSDGRSEWAEARTVLVKDSTNRDSLDMI 263
>AF493068-1|AAM11660.1| 197|Homo sapiens delta 4-delta 7/11
truncated prolactin receptor protein.
Length = 197
Score = 30.7 bits (66), Expect = 6.9
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = -2
Query: 652 HIGQQIIV*VLRXSPNHGRISAWSPTSXLL*PN 554
H GQ+ +V V R P+HG SAWSP + + P+
Sbjct: 126 HPGQKYLVQV-RCKPDHGYWSAWSPATFIQIPS 157
>AF492470-1|AAM18048.1| 268|Homo sapiens prolactin receptor delta
7/11 protein.
Length = 268
Score = 30.7 bits (66), Expect = 6.9
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = -2
Query: 652 HIGQQIIV*VLRXSPNHGRISAWSPTSXLL*PN 554
H GQ+ +V V R P+HG SAWSP + + P+
Sbjct: 197 HPGQKYLVQV-RCKPDHGYWSAWSPATFIQIPS 228
>AF305909-1|AAK08955.1| 630|Homo sapiens choline acetyltransferase
isoform R protein.
Length = 630
Score = 30.7 bits (66), Expect = 6.9
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +3
Query: 210 LVTSLGTNKWGEARSLALWDKTMMDSLEKL 299
L+TS G ++W EAR++ + D T DSL+ +
Sbjct: 234 LLTSDGRSEWAEARTVLVKDSTNRDSLDMI 263
>AF305908-1|AAK08954.1| 666|Homo sapiens choline acetyltransferase
isoform S protein.
Length = 666
Score = 30.7 bits (66), Expect = 6.9
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +3
Query: 210 LVTSLGTNKWGEARSLALWDKTMMDSLEKL 299
L+TS G ++W EAR++ + D T DSL+ +
Sbjct: 270 LLTSDGRSEWAEARTVLVKDSTNRDSLDMI 299
>AF305907-1|AAK08953.1| 748|Homo sapiens choline acetyltransferase
isoform M protein.
Length = 748
Score = 30.7 bits (66), Expect = 6.9
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +3
Query: 210 LVTSLGTNKWGEARSLALWDKTMMDSLEKL 299
L+TS G ++W EAR++ + D T DSL+ +
Sbjct: 352 LLTSDGRSEWAEARTVLVKDSTNRDSLDMI 381
>AF305906-3|AAK08952.1| 630|Homo sapiens choline acetyltransferase
isoform R protein.
Length = 630
Score = 30.7 bits (66), Expect = 6.9
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +3
Query: 210 LVTSLGTNKWGEARSLALWDKTMMDSLEKL 299
L+TS G ++W EAR++ + D T DSL+ +
Sbjct: 234 LLTSDGRSEWAEARTVLVKDSTNRDSLDMI 263
>AF305906-2|AAK08951.1| 666|Homo sapiens choline acetyltransferase
isoform S protein.
Length = 666
Score = 30.7 bits (66), Expect = 6.9
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +3
Query: 210 LVTSLGTNKWGEARSLALWDKTMMDSLEKL 299
L+TS G ++W EAR++ + D T DSL+ +
Sbjct: 270 LLTSDGRSEWAEARTVLVKDSTNRDSLDMI 299
>AF305906-1|AAK08950.1| 748|Homo sapiens choline acetyltransferase
isoform M protein.
Length = 748
Score = 30.7 bits (66), Expect = 6.9
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +3
Query: 210 LVTSLGTNKWGEARSLALWDKTMMDSLEKL 299
L+TS G ++W EAR++ + D T DSL+ +
Sbjct: 352 LLTSDGRSEWAEARTVLVKDSTNRDSLDMI 381
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,338,859
Number of Sequences: 237096
Number of extensions: 2460998
Number of successful extensions: 5287
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 4879
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5217
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10649685938
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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