Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_A20
(950 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 39 0.001
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 33 0.078
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 0.098
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 32 0.14
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 31 0.18
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 31 0.31
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 30 0.55
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 29 0.96
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 29 0.96
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 29 1.3
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 28 1.7
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 28 1.7
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 28 2.2
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 27 3.9
SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyc... 26 6.8
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 26 9.0
SPBC660.05 |||conserved fungal protein|Schizosaccharomyces pombe... 26 9.0
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 38.7 bits (86), Expect = 0.001
Identities = 16/26 (61%), Positives = 16/26 (61%), Gaps = 4/26 (15%)
Frame = +3
Query: 783 PPXXPPPPPPXP----PSXXXPPPPP 848
PP PPPPPP P PS PPPPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 32.7 bits (71), Expect = 0.078
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = +3
Query: 783 PPXXPPPPPPXPPSXXXPPPPP 848
PP PPPPPP PPPPP
Sbjct: 761 PP--PPPPPPGVAGAGPPPPPP 780
Score = 31.1 bits (67), Expect = 0.24
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +3
Query: 786 PXXPPPPPPXPPSXXXPPPPP 848
P PPPPP + PPPPP
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPP 781
Score = 29.1 bits (62), Expect = 0.96
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 783 PPXXPPPPPPXPPSXXXPPPPP 848
P P P PP P PPPPP
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPPP 765
Score = 29.1 bits (62), Expect = 0.96
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 786 PXXPPPPPPXPPSXXXPPPPP 848
P P PPP P PPPPP
Sbjct: 746 PAPIPVPPPAPIMGGPPPPPP 766
Score = 29.1 bits (62), Expect = 0.96
Identities = 16/36 (44%), Positives = 16/36 (44%), Gaps = 10/36 (27%)
Frame = +3
Query: 783 PPXXP----PPPPPXPPSXXX------PPPPPXXRA 860
PP P PPPPP PP PPPPP A
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSA 787
Score = 27.1 bits (57), Expect = 3.9
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +3
Query: 786 PXXPPPPPPXPPSXXXPPPPP 848
P PPP P PPPPP
Sbjct: 748 PIPVPPPAPIMGGPPPPPPPP 768
Score = 26.2 bits (55), Expect = 6.8
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +3
Query: 783 PPXXPPPPPPXPPSXXXPPPPP 848
P P PPP PPPPP
Sbjct: 746 PAPIPVPPPAPIMGGPPPPPPP 767
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.6 bits (56), Expect(2) = 0.098
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +3
Query: 795 PPPPPPXPPS 824
PPPPPP PP+
Sbjct: 189 PPPPPPPPPA 198
Score = 24.6 bits (51), Expect(2) = 0.47
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +3
Query: 783 PPXXPPPPPPXPP 821
P PPPPP PP
Sbjct: 236 PAPPPPPPPTLPP 248
Score = 24.2 bits (50), Expect(2) = 0.098
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +3
Query: 783 PPXXPPPPPPXPP 821
P PPPPP PP
Sbjct: 184 PSDYNPPPPPPPP 196
Score = 23.8 bits (49), Expect(2) = 0.47
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +3
Query: 801 PPPPXPPSXXXPPPPP 848
PPPP PS PP PP
Sbjct: 273 PPPPATPS--QPPRPP 286
Score = 23.4 bits (48), Expect(3) = 0.20
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +3
Query: 795 PPPPPPXPPS 824
P PPPP PP+
Sbjct: 236 PAPPPPPPPT 245
Score = 23.0 bits (47), Expect(3) = 0.20
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +3
Query: 783 PPXXPPPPP 809
PP PPPPP
Sbjct: 189 PPPPPPPPP 197
Score = 21.4 bits (43), Expect(3) = 0.20
Identities = 7/14 (50%), Positives = 7/14 (50%)
Frame = +3
Query: 798 PPPPPXPPSXXXPP 839
PPPP P PP
Sbjct: 273 PPPPATPSQPPRPP 286
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 31.9 bits (69), Expect = 0.14
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = -2
Query: 847 GGGGGXXXEGGXGGGGGGXXGGXXGG 770
G GG GG GGG GG GG GG
Sbjct: 17 GRGGFNGGRGGFGGGRGGARGGGRGG 42
Score = 29.5 bits (63), Expect = 0.73
Identities = 15/30 (50%), Positives = 15/30 (50%)
Frame = -2
Query: 859 ARXXGGGGGXXXEGGXGGGGGGXXGGXXGG 770
AR G GG GG GG GG GG GG
Sbjct: 35 ARGGGRGGARGGRGGRGGARGG-RGGSSGG 63
Score = 28.3 bits (60), Expect = 1.7
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -2
Query: 847 GGGGGXXXEGGXGGGGGGXXGGXXG 773
G GG GG GG GG GG G
Sbjct: 10 GRGGSRGGRGGFNGGRGGFGGGRGG 34
Score = 28.3 bits (60), Expect = 1.7
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = -2
Query: 847 GGGGGXXXEGGXGGGGGGXXGGXXGG 770
GG GG GG GG GGG G GG
Sbjct: 16 GGRGGF--NGGRGGFGGGRGGARGGG 39
Score = 28.3 bits (60), Expect = 1.7
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = -2
Query: 847 GGGGGXXXEGGXGGGGGGXXGGXXGG 770
GG GG GG GG GG GG GG
Sbjct: 23 GGRGGFG--GGRGGARGGGRGGARGG 46
Score = 27.1 bits (57), Expect = 3.9
Identities = 14/28 (50%), Positives = 14/28 (50%), Gaps = 2/28 (7%)
Frame = -2
Query: 847 GGGGGXXXEGGXGGG--GGGXXGGXXGG 770
GGG G GG GG G G GG GG
Sbjct: 29 GGGRGGARGGGRGGARGGRGGRGGARGG 56
Score = 26.6 bits (56), Expect = 5.1
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -2
Query: 847 GGGGGXXXEGGXGGGGGGXXGGXXGG 770
G GG GG GG GG GG GG
Sbjct: 46 GRGGRGGARGGRGGSSGG-RGGAKGG 70
Score = 25.8 bits (54), Expect = 9.0
Identities = 15/28 (53%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
Frame = -2
Query: 847 GGGGGXXXEGGXGG--GGGGXXGGXXGG 770
GG GG GG GG GG G GG GG
Sbjct: 9 GGRGGS--RGGRGGFNGGRGGFGGGRGG 34
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 31.5 bits (68), Expect = 0.18
Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%)
Frame = +3
Query: 783 PPXXPPPPPPXPPSXXXPP--PPP 848
PP PPPP PP PP PPP
Sbjct: 1710 PPMSVPPPPSAPPMPAGPPSAPPP 1733
Score = 28.7 bits (61), Expect = 1.3
Identities = 12/24 (50%), Positives = 12/24 (50%), Gaps = 2/24 (8%)
Frame = +3
Query: 783 PPXXPPPPPPXPPSXXXPPP--PP 848
PP P PP PP PPP PP
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPP 1722
Score = 28.7 bits (61), Expect = 1.3
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 783 PPXXPPPPPPXPPSXXXPPPP 845
PP PP P PPS PP P
Sbjct: 1716 PPPSAPPMPAGPPSAPPPPLP 1736
Score = 27.5 bits (58), Expect = 2.9
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +3
Query: 786 PXXPPPPPPXPPSXXXPPPP 845
P PPPP PP PP P
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMP 1724
Score = 26.2 bits (55), Expect = 6.8
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +3
Query: 783 PPXXPPPPPPXPPSXXXPPPPPXXRA 860
PP PP P P PPP P A
Sbjct: 1715 PPPPSAPPMPAGPPSAPPPPLPASSA 1740
Score = 25.8 bits (54), Expect = 9.0
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +3
Query: 783 PPXXPPPPPPXPPSXXXPPPPP 848
PP P P S PPPPP
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPP 1711
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 30.7 bits (66), Expect = 0.31
Identities = 15/25 (60%), Positives = 15/25 (60%)
Frame = -2
Query: 844 GGGGXXXEGGXGGGGGGXXGGXXGG 770
GGG EGG GG GGG GG GG
Sbjct: 227 GGGPGGFEGGPGGFGGG-PGGFGGG 250
Score = 27.9 bits (59), Expect = 2.2
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = -2
Query: 844 GGGGXXXEGGXGGGGGGXXGGXXGG 770
GGG GG GG GGG GG GG
Sbjct: 241 GGGPGGFGGGLGGFGGG-PGGFGGG 264
Score = 27.5 bits (58), Expect = 2.9
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = -2
Query: 847 GGGGGXXXEGGXGGGGGGXXGGXXGG 770
G GG GG GG GGG GG GG
Sbjct: 212 GFGGEGHHHGGHGGFGGG-PGGFEGG 236
Score = 26.6 bits (56), Expect = 5.1
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -2
Query: 847 GGGGGXXXEGGXGGGGGGXXGGXXG 773
G G GG GGG GG GG G
Sbjct: 215 GEGHHHGGHGGFGGGPGGFEGGPGG 239
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 29.9 bits (64), Expect = 0.55
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -2
Query: 847 GGGGGXXXEGGXGGGGGGXXGGXXGG 770
GG GG GG GGG G GG G
Sbjct: 457 GGRGGFGGRGGFGGGRGRGRGGARSG 482
Score = 29.5 bits (63), Expect = 0.73
Identities = 14/26 (53%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = -2
Query: 844 GGGGXXXEGGXGGGGG-GXXGGXXGG 770
GGG GG GG GG G GG GG
Sbjct: 446 GGGSRGGRGGFGGRGGFGGRGGFGGG 471
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 29.1 bits (62), Expect = 0.96
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +3
Query: 786 PXXPPPPPPXPPSXXXPPPP 845
P PPPPP P+ P PP
Sbjct: 3 PAPPPPPPAPAPAAAAPAPP 22
Score = 27.5 bits (58), Expect = 2.9
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +3
Query: 783 PPXXPPPPPPXPPSXXXPPPPPXXRA 860
PP P P PP PPPP +A
Sbjct: 184 PPSAPSLPSAVPPMPPKVPPPPLSQA 209
Score = 25.8 bits (54), Expect = 9.0
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = +3
Query: 783 PPXXPPPPPPXPPSXXXPPP 842
P PPPP P P + PP
Sbjct: 3 PAPPPPPPAPAPAAAAPAPP 22
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 29.1 bits (62), Expect = 0.96
Identities = 14/26 (53%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = -2
Query: 844 GGGGXXXEGGXGGGG-GGXXGGXXGG 770
GG G GG GGG GG GG GG
Sbjct: 152 GGFGGNSRGGFGGGSRGGFGGGSRGG 177
Score = 29.1 bits (62), Expect = 0.96
Identities = 14/26 (53%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = -2
Query: 844 GGGGXXXEGGXGGGG-GGXXGGXXGG 770
GG G GG GGG GG GG GG
Sbjct: 160 GGFGGGSRGGFGGGSRGGSRGGFRGG 185
Score = 27.5 bits (58), Expect = 2.9
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -2
Query: 847 GGGGGXXXEGGXGGGGGGXXGGXXGG 770
G GG GG GG GG G GG
Sbjct: 136 GRGGRGGFRGGRGGSRGGFGGNSRGG 161
Score = 27.5 bits (58), Expect = 2.9
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -2
Query: 847 GGGGGXXXEGGXGGGGGGXXGGXXGG 770
GG G G GG GG GG GG
Sbjct: 164 GGSRGGFGGGSRGGSRGGFRGGSRGG 189
Score = 27.1 bits (57), Expect = 3.9
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -2
Query: 847 GGGGGXXXEGGXGGGGGGXXGGXXGG 770
GG G GG GGG GG GG
Sbjct: 148 GGSRGGFGGNSRGGFGGGSRGGFGGG 173
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 28.7 bits (61), Expect = 1.3
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 795 PPPPPPXPPSXXXPPPPP 848
PP P P P PPPPP
Sbjct: 731 PPTPAPTPAVKHHPPPPP 748
Score = 28.3 bits (60), Expect = 1.7
Identities = 12/27 (44%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Frame = +3
Query: 783 PPXXPPPPPPXP-PSXXXPPPPPXXRA 860
P P PP P P P+ PPPP R+
Sbjct: 725 PQVTPAPPTPAPTPAVKHHPPPPPVRS 751
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 28.3 bits (60), Expect = 1.7
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +3
Query: 786 PXXPPPPPPXPPSXXXPPPPP 848
P P PP PP+ PPP P
Sbjct: 460 PAGMPAAPPLPPAAPAPPPAP 480
Score = 27.9 bits (59), Expect = 2.2
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 795 PPPPPPXPPSXXXPPPP 845
PPPPP PS PPP
Sbjct: 362 PPPPPRSAPSTGRQPPP 378
Score = 26.6 bits (56), Expect = 5.1
Identities = 13/31 (41%), Positives = 14/31 (45%), Gaps = 9/31 (29%)
Frame = +3
Query: 795 PPPPPP---------XPPSXXXPPPPPXXRA 860
PPPPPP PP PPPP R+
Sbjct: 338 PPPPPPRSNAAGSIPLPPQGRSAPPPPPPRS 368
Score = 25.8 bits (54), Expect = 9.0
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +3
Query: 786 PXXPPPPPPXPPSXXXPPPPP 848
P P PP PPS PP P
Sbjct: 440 PMGAPAAPPLPPSAPIAPPLP 460
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 28.3 bits (60), Expect = 1.7
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3
Query: 786 PXXPPPPPPXPP 821
P PPPPPP PP
Sbjct: 942 PAFPPPPPPPPP 953
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 27.9 bits (59), Expect = 2.2
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +3
Query: 795 PPPPPPXPPS 824
PPPPPP PPS
Sbjct: 306 PPPPPPPPPS 315
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 27.1 bits (57), Expect = 3.9
Identities = 14/28 (50%), Positives = 14/28 (50%), Gaps = 2/28 (7%)
Frame = +3
Query: 783 PPXXPPPP-PPXP-PSXXXPPPPPXXRA 860
PP PP PP P PS PP PP A
Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVPPPSTA 1216
Score = 25.8 bits (54), Expect = 9.0
Identities = 12/29 (41%), Positives = 14/29 (48%), Gaps = 3/29 (10%)
Frame = +3
Query: 783 PPXXPP---PPPPXPPSXXXPPPPPXXRA 860
PP PP PP P P + P P P +A
Sbjct: 1208 PPVPPPSTAPPVPTPSAGLPPVPVPTAKA 1236
>SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 354
Score = 26.2 bits (55), Expect = 6.8
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -2
Query: 847 GGGGGXXXEGGXGGGGGGXXGG 782
GGG G GG GG G G GG
Sbjct: 225 GGGLGGAGLGGLGGAGLGGFGG 246
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 25.8 bits (54), Expect = 9.0
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +3
Query: 795 PPPPPPXPPSXXXPPPP 845
PPPP P PPPP
Sbjct: 208 PPPPMHHKPGEHMPPPP 224
Score = 25.8 bits (54), Expect = 9.0
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +3
Query: 795 PPPPPPXPPSXXXPPPP 845
PPPP P PPPP
Sbjct: 221 PPPPMHHEPGEHMPPPP 237
Score = 25.8 bits (54), Expect = 9.0
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +3
Query: 795 PPPPPPXPPSXXXPPPP 845
PPPP P PPPP
Sbjct: 234 PPPPMHHEPGEHMPPPP 250
Score = 25.8 bits (54), Expect = 9.0
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +3
Query: 795 PPPPPPXPPSXXXPPPP 845
PPPP P PPPP
Sbjct: 247 PPPPMHHEPGEHMPPPP 263
Score = 25.8 bits (54), Expect = 9.0
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +3
Query: 795 PPPPPPXPPSXXXPPPP 845
PPPP P PPPP
Sbjct: 260 PPPPMHHEPGEHMPPPP 276
Score = 25.8 bits (54), Expect = 9.0
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +3
Query: 795 PPPPPPXPPSXXXPPPP 845
PPPP P PPPP
Sbjct: 273 PPPPMHHEPGEHMPPPP 289
Score = 25.8 bits (54), Expect = 9.0
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +3
Query: 795 PPPPPPXPPSXXXPPPP 845
PPPP P PPPP
Sbjct: 286 PPPPMHHEPGEHMPPPP 302
Score = 25.8 bits (54), Expect = 9.0
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +3
Query: 795 PPPPPPXPPSXXXPPPP 845
PPPP P PPPP
Sbjct: 299 PPPPMHHEPGEHMPPPP 315
Score = 25.8 bits (54), Expect = 9.0
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +3
Query: 795 PPPPPPXPPSXXXPPPP 845
PPPP P PPPP
Sbjct: 312 PPPPMHHEPGEHMPPPP 328
Score = 25.8 bits (54), Expect = 9.0
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +3
Query: 795 PPPPPPXPPSXXXPPPP 845
PPPP P PPPP
Sbjct: 325 PPPPMHHEPGEHMPPPP 341
>SPBC660.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 143
Score = 25.8 bits (54), Expect = 9.0
Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
Frame = -2
Query: 856 RXXGGGGGXXX--EGGXGGGGGGXXGGXXG 773
R GG G GG GG GGG GG G
Sbjct: 110 RIGGGHHGPLHGPHGGFGGRGGGRMGGRGG 139
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,020,180
Number of Sequences: 5004
Number of extensions: 29537
Number of successful extensions: 385
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 259
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 485316198
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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