Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_A19
(1011 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 36 0.068
03_02_0738 - 10824121-10825572 31 1.5
12_02_1174 - 26696869-26698191 30 2.6
07_01_0674 + 5047503-5047646,5047808-5047901,5048743-5048828,504... 30 2.6
08_01_0059 - 394001-394708 30 3.4
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 30 3.4
07_03_0329 + 16840051-16840917,16840999-16841342,16841444-168415... 30 3.4
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 29 4.5
05_01_0004 - 34967-35149,35340-35501,36078-36225,36309-36385,365... 29 4.5
05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-18... 29 5.9
04_04_1104 - 30928475-30928501,30929008-30929110,30929287-309293... 29 5.9
11_06_0610 - 25449085-25453284 29 7.8
09_02_0369 - 8012470-8013120 29 7.8
01_03_0117 + 12684729-12685886,12685978-12686145,12686292-126863... 29 7.8
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 35.5 bits (78), Expect = 0.068
Identities = 23/79 (29%), Positives = 25/79 (31%)
Frame = +2
Query: 632 PPPXXXPXLPXGHXLHXPSXXXSPXXSPPXXWGXAXXXTXXXPXXXSPXXXSXXXSPSXX 811
PPP P LP H H P PP A P +PS
Sbjct: 282 PPPPAPPPLPPSHHHHHGHHPPPPHPLPPGAGAGAGTGAPPPPPAHPAAPAPPPPAPS-- 339
Query: 812 XXSSAXXXXXPPPXPGPXA 868
S+A PPP P P A
Sbjct: 340 -PSAAGAGSGPPPPPPPAA 357
>03_02_0738 - 10824121-10825572
Length = 483
Score = 31.1 bits (67), Expect = 1.5
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +3
Query: 633 PPPTXXPXSRXXTLSXPPPXXXPXXPXP 716
PPP P S LS PPP P P P
Sbjct: 78 PPPPSPPSSSPPPLSFPPPPPPPSSPPP 105
>12_02_1174 - 26696869-26698191
Length = 440
Score = 30.3 bits (65), Expect = 2.6
Identities = 21/102 (20%), Positives = 26/102 (25%)
Frame = +1
Query: 463 PIPXPXXRXXXSXGXAXPXPAPXRXXXAXXXXXVXXXXAXRXXTPPPAXXXXPGATXPPX 642
P P P P P P + + +PPP P + PP
Sbjct: 146 PQPPPSLPPPPPPPPPPPPPRPPSVKPPVVQPKPQPPPSLQPPSPPPPPPTRPPSVKPPV 205
Query: 643 XXPXPPGXXXSPXPLXXXXPXXLXPXXXGXCXXXNXAXPPXP 768
P P P P P + P G P P
Sbjct: 206 VQPKPQPPPTLPPPSPPPPPPTVPPRTPGDTPAVVEPKPQPP 247
>07_01_0674 +
5047503-5047646,5047808-5047901,5048743-5048828,
5049380-5049429,5049517-5049586,5049668-5049749,
5049867-5050267,5050414-5050941,5051823-5052044
Length = 558
Score = 30.3 bits (65), Expect = 2.6
Identities = 21/82 (25%), Positives = 21/82 (25%)
Frame = +2
Query: 629 LPPPXXXPXLPXGHXLHXPSXXXSPXXSPPXXWGXAXXXTXXXPXXXSPXXXSXXXSPSX 808
LPPP P LP PS P PP P P P
Sbjct: 203 LPPPPPPPPLPASSEPVDPSAASLPPLPPPPPPPPKPANIAGAPGLPLPPPPPPPPGPPP 262
Query: 809 XXXSSAXXXXXPPPXPGPXAXS 874
PPP P P S
Sbjct: 263 REIVPGQTLLPPPPPPRPLQPS 284
>08_01_0059 - 394001-394708
Length = 235
Score = 29.9 bits (64), Expect = 3.4
Identities = 18/61 (29%), Positives = 19/61 (31%), Gaps = 2/61 (3%)
Frame = +1
Query: 595 PPPAXXXXPGATXPPXX--XPXPPGXXXSPXPLXXXXPXXLXPXXXGXCXXXNXAXPPXP 768
PPP P AT PP P PP P P P P PP P
Sbjct: 5 PPPRRAPPPPATPPPPPRRAPPPPSPPIRPPPPPTPRPYAPPPPSHPLAPPPPHISPPAP 64
Query: 769 L 771
+
Sbjct: 65 V 65
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 29.9 bits (64), Expect = 3.4
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +1
Query: 592 TPPPAXXXXPGATXPPXXXPXPPGXXXSPXP 684
TPPP P PP P P G P P
Sbjct: 1168 TPPPPPPLSPSLPPPPPPPPLPSGPPPQPAP 1198
Score = 28.7 bits (61), Expect = 7.8
Identities = 17/59 (28%), Positives = 18/59 (30%)
Frame = +1
Query: 595 PPPAXXXXPGATXPPXXXPXPPGXXXSPXPLXXXXPXXLXPXXXGXCXXXNXAXPPXPL 771
PPP P PP PP P PL P P A PP P+
Sbjct: 1146 PPPLPSDSPPCQ-PPLPPSPPPATPPPPPPLSPSLPPPPPPPPLPSGPPPQPAPPPLPI 1203
>07_03_0329 +
16840051-16840917,16840999-16841342,16841444-16841574,
16841671-16841792,16841877-16841983,16842104-16842236,
16842342-16842458,16842560-16842667,16842716-16842742,
16842759-16842830,16843462-16843584,16843671-16843833,
16844140-16844264,16844355-16844489,16844574-16844677,
16844772-16844834,16844930-16844993,16845186-16845318,
16845414-16845487,16845603-16845697,16845799-16845830,
16846201-16846355
Length = 1097
Score = 29.9 bits (64), Expect = 3.4
Identities = 26/88 (29%), Positives = 28/88 (31%), Gaps = 1/88 (1%)
Frame = -1
Query: 717 GGEXXGXXXXEGXWRXXPXGRXGXXXGGGSRPRXXXGXGGXXXXPXCXXXXDXXXXXXXX 538
GG+ G G R G G GG R G GG
Sbjct: 82 GGQGRGYYDDGGDGRGYQRGMEGGGGRGGYR---GDGDGGYGRGGGGYHGDGERGYGRGG 138
Query: 537 XAGGGGXGG-RXAXXXXSTXXRXRNGGG 457
GGGG GG R S+ R R GGG
Sbjct: 139 GGGGGGGGGYRGDDEGRSSYGRARGGGG 166
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 29.5 bits (63), Expect = 4.5
Identities = 15/58 (25%), Positives = 17/58 (29%)
Frame = +1
Query: 595 PPPAXXXXPGATXPPXXXPXPPGXXXSPXPLXXXXPXXLXPXXXGXCXXXNXAXPPXP 768
PPP P + PP P PP P P C + PP P
Sbjct: 551 PPPPSGNKPAFSPPPPPPPPPPPPLPQSNYASSQPPPPPPPPPLPNCLVPSPPPPPPP 608
>05_01_0004 -
34967-35149,35340-35501,36078-36225,36309-36385,
36507-36577,36850-37263,37518-38268
Length = 601
Score = 29.5 bits (63), Expect = 4.5
Identities = 15/35 (42%), Positives = 16/35 (45%), Gaps = 4/35 (11%)
Frame = +1
Query: 592 TPPPAXXXXPGATXP----PXXXPXPPGXXXSPXP 684
+PPPA P AT P P P PP SP P
Sbjct: 58 SPPPASPPLPSATPPLAASPPPPPPPPPPRNSPSP 92
>05_01_0028 +
182528-183852,183967-184127,184872-185116,185330-186073
Length = 824
Score = 29.1 bits (62), Expect = 5.9
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +3
Query: 633 PPPTXXPXSRXXTLSXPPPXXXPXXPXP 716
PPP P R + PPP P P P
Sbjct: 75 PPPAPRPPRRHHRIPPPPPPLLPTPPPP 102
>04_04_1104 -
30928475-30928501,30929008-30929110,30929287-30929340,
30929803-30929895,30930063-30930140,30930416-30930527,
30930618-30930756,30930823-30930910,30930984-30931079,
30931675-30931781,30931874-30932009,30932089-30932186,
30932954-30933047,30933132-30933301,30933749-30933819,
30936066-30936194,30936552-30936654,30936764-30936907,
30937123-30937245,30937482-30937563,30939044-30939120,
30939261-30939315,30939365-30939443,30939544-30939620,
30939739-30939869,30939947-30940120,30940245-30940310,
30940937-30941572
Length = 1113
Score = 29.1 bits (62), Expect = 5.9
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = +3
Query: 627 DXPPPTXXPXSRXXTLSXPPPXXXPXXPXP 716
D PP P SR + PPP P P P
Sbjct: 154 DNVPPASGPASRAPLVPAPPPAPFPPVPTP 183
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 28.7 bits (61), Expect = 7.8
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +3
Query: 633 PPPTXXPXSRXXTLSXPPPXXXPXXPXP 716
PPP P +S PPP P P P
Sbjct: 1194 PPPVKSPPPPAPVISPPPPVKSPPPPAP 1221
>09_02_0369 - 8012470-8013120
Length = 216
Score = 28.7 bits (61), Expect = 7.8
Identities = 13/37 (35%), Positives = 15/37 (40%)
Frame = +3
Query: 627 DXPPPTXXPXSRXXTLSXPPPXXXPXXPXPXXXGALL 737
D PP P + T PPP P P P A+L
Sbjct: 46 DDPPLKPPPQQQFITAQPPPPDEPPLKPPPSFYPAVL 82
>01_03_0117 +
12684729-12685886,12685978-12686145,12686292-12686336,
12686438-12687280
Length = 737
Score = 28.7 bits (61), Expect = 7.8
Identities = 16/59 (27%), Positives = 20/59 (33%), Gaps = 2/59 (3%)
Frame = +1
Query: 598 PPAXXXXPGATXPPXXXP--XPPGXXXSPXPLXXXXPXXLXPXXXGXCXXXNXAXPPXP 768
PPA P + PP P PP + P P L P + + PP P
Sbjct: 254 PPAPATKPPPSFPPQLAPTMPPPAHAPAETPAPPTTPPALPPATTAPSPKNSSSSPPPP 312
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,797,702
Number of Sequences: 37544
Number of extensions: 218089
Number of successful extensions: 1439
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 768
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1230
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2975543960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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