Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_A17
(971 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 42 2e-04
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 39 0.001
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 36 0.011
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 34 0.035
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 33 0.046
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 33 0.061
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 33 0.080
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 32 0.11
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 31 0.32
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 29 0.75
SPBC19C7.05 |||cell wall organization protein |Schizosaccharomyc... 29 0.75
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 29 0.75
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 3.0
SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces pom... 27 3.0
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 27 5.3
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 27 5.3
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 27 5.3
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 26 7.0
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 41.5 bits (93), Expect = 2e-04
Identities = 34/127 (26%), Positives = 37/127 (29%), Gaps = 5/127 (3%)
Frame = +2
Query: 488 PPXPXXEXPPPPAPXXXXSPXXAXXPPPLXGAPXAXXTXPLXNP----XPXXXPPFG-PP 652
PP P PP P +P P P+ P P P G PP
Sbjct: 1121 PPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPP 1180
Query: 653 PGLXXXLLPPGPXXPXTPPPXKKXXGXSPXKKPXPPXKFGNXTXXXXFLPPAPXPXPHXP 832
+PP P PP K G P PP LPP P P P
Sbjct: 1181 VPKPAAGVPPVPPPSEAPPVPKPSVGVPPV---PPPSTAPPVPTPSAGLPPVPVPTAKAP 1237
Query: 833 XXXAPXS 853
AP S
Sbjct: 1238 PVPAPSS 1244
Score = 40.7 bits (91), Expect = 3e-04
Identities = 41/175 (23%), Positives = 46/175 (26%), Gaps = 3/175 (1%)
Frame = +2
Query: 332 PPXXPGXKKTPXPLXSKXRPXPXPKKTNXPXXSKXXXXXXXXXXXXXXXXXXPPXPXXEX 511
P P P P+ S P P P T P P P
Sbjct: 1023 PVPLPSADAPPIPVPSTAPPVPIPTST-PPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSG 1081
Query: 512 PPP-PAPXXXXS-PXXAXXPPPLXGAPXAXXTXPLXN-PXPXXXPPFGPPPGLXXXLLPP 682
PP PAP P + PP+ A P + P P PP PP
Sbjct: 1082 APPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPP 1141
Query: 683 GPXXPXTPPPXKKXXGXSPXKKPXPPXKFGNXTXXXXFLPPAPXPXPHXPXXXAP 847
P PP G P P P +PP P P P P
Sbjct: 1142 VPKPSVAAPPVPAPSGAPPV--PKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPP 1194
Score = 37.9 bits (84), Expect = 0.002
Identities = 44/179 (24%), Positives = 47/179 (26%), Gaps = 6/179 (3%)
Frame = +2
Query: 335 PXXPGXKKTPXP-LXSKXRPXPXPKKTNXPXXSKXXXXXXXXXXXXXXXXXXPPXPXXEX 511
P P + P P L SK P P P P
Sbjct: 1004 PAAPLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAP 1063
Query: 512 PPPPAPXXXXSPXXAXXPPPLXGAPXAXXTXPLXN--PXPXXXPPFGPPPGLXXXLLPPG 685
PP PAP A P AP P + P P PP PP
Sbjct: 1064 PPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPV 1123
Query: 686 PXXPXTPPPXKKXXGXSPXKKP---XPPXKFGNXTXXXXFLPPAPXPXPHXPXXXAPXS 853
P PP G P KP PP + PP P P P AP S
Sbjct: 1124 PKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGA------PPVPKPSVAAPPVPAPSS 1176
Score = 33.9 bits (74), Expect = 0.035
Identities = 32/146 (21%), Positives = 39/146 (26%), Gaps = 1/146 (0%)
Frame = +2
Query: 323 GXXPPXXPGXKKTPXPLXSKXRPXPXPKKTNXPXXSKXXXXXXXXXXXXXXXXXXPPXPX 502
G P P P P+ S P P P P + P P
Sbjct: 1119 GAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPV---PAPS 1175
Query: 503 XEXPPPPAPXXXXSPXXAXXPPPLXGAPXAXXTXPLXN-PXPXXXPPFGPPPGLXXXLLP 679
PP P P P PPP P + + P P PP P +
Sbjct: 1176 SGIPPVPKPAAGVPPV----PPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPV 1231
Query: 680 PGPXXPXTPPPXKKXXGXSPXKKPXP 757
P P P P + S + P
Sbjct: 1232 PTAKAPPVPAPSSEAPSVSTPRSSVP 1257
Score = 33.1 bits (72), Expect = 0.061
Identities = 34/128 (26%), Positives = 36/128 (28%), Gaps = 5/128 (3%)
Frame = +2
Query: 488 PPXPXX--EXPPPPAPXXXXSPXXAXXPPPLXGAPXAXXTXPLXNPXPXXXPPFGPPPGL 661
PP P + PP P P P P P P T P P PPP
Sbjct: 1012 PPVPKLSSKAPPVPLPSADAPP----IPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVP 1067
Query: 662 XXXLLPPGPXXPXTPPPXKKXXGXSPXKKP---XPPXKFGNXTXXXXFLPPAPXPXPHXP 832
P P PP G P KP PP + P P P P
Sbjct: 1068 APSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVP-KP 1126
Query: 833 XXXAPXSP 856
AP P
Sbjct: 1127 SVAAPPVP 1134
Score = 30.7 bits (66), Expect = 0.32
Identities = 26/130 (20%), Positives = 28/130 (21%)
Frame = +2
Query: 323 GXXPPXXPGXKKTPXPLXSKXRPXPXPKKTNXPXXSKXXXXXXXXXXXXXXXXXXPPXPX 502
G P P P P S P P P P + PP
Sbjct: 1138 GAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEA 1197
Query: 503 XEXPPPPAPXXXXSPXXAXXPPPLXGAPXAXXTXPLXNPXPXXXPPFGPPPGLXXXLLPP 682
P P P P P A P P P P P
Sbjct: 1198 PPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEAPSVSTPRSSVP 1257
Query: 683 GPXXPXTPPP 712
P +P P
Sbjct: 1258 SPHSNASPSP 1267
Score = 28.3 bits (60), Expect = 1.7
Identities = 15/47 (31%), Positives = 16/47 (34%), Gaps = 2/47 (4%)
Frame = +1
Query: 439 PFXXPPPPHXXFXXPTXPXPPXGXTXPPXPR--XPTLPXTXXGPPPP 573
P PP P P P P G P P P +P PP P
Sbjct: 1155 PSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVP 1201
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 39.1 bits (87), Expect = 0.001
Identities = 19/56 (33%), Positives = 24/56 (42%)
Frame = +1
Query: 451 PPPPHXXFXXPTXPXPPXGXTXPPXPRXPTLPXTXXGPPPPXXGTXRXXNTPSXKP 618
PPPP + P PP G + PP P + P T PPP + N P+ P
Sbjct: 339 PPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGR-QPPPLSSSRAVSNPPAPPP 393
Score = 37.5 bits (83), Expect = 0.003
Identities = 33/124 (26%), Positives = 35/124 (28%), Gaps = 4/124 (3%)
Frame = +2
Query: 488 PPXPXXEXPP----PPAPXXXXSPXXAXXPPPLXGAPXAXXTXPLXNPXPXXXPPFGPPP 655
PP P P PP + PPP A PL N PP PP
Sbjct: 362 PPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPP 421
Query: 656 GLXXXLLPPGPXXPXTPPPXKKXXGXSPXKKPXPPXKFGNXTXXXXFLPPAPXPXPHXPX 835
L P P P PP +P P P PP P P P
Sbjct: 422 SLPPSAPPSLP--PSAPPSLPMGAPAAPPLPPSAPIA-PPLPAGMPAAPPLPPAAPAPPP 478
Query: 836 XXAP 847
AP
Sbjct: 479 APAP 482
Score = 36.3 bits (80), Expect = 0.007
Identities = 33/109 (30%), Positives = 35/109 (32%), Gaps = 4/109 (3%)
Frame = +2
Query: 518 PPAPXXXXSPXXAXXPPPLXGAPXAXXTXPLXNPX--PXXXPPFGPP--PGLXXXLLPPG 685
PPAP A PPL A T P+ P P PP PP P P
Sbjct: 388 PPAPPPAIPGRSAPALPPLGNASRTS-TPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAA 446
Query: 686 PXXPXTPPPXKKXXGXSPXKKPXPPXKFGNXTXXXXFLPPAPXPXPHXP 832
P P + P P P PP PPAP P P P
Sbjct: 447 PPLPPSAPIAPPLPAGMPAAPPLPPAAPAP--------PPAPAPAPAAP 487
Score = 34.7 bits (76), Expect = 0.020
Identities = 26/107 (24%), Positives = 33/107 (30%)
Frame = +3
Query: 480 PHXPPXPXGKXXPPXPPXTXXPPDXPXXPPPXXGHPPPXXHXLX*TPXXPXXPXSARPPG 659
P P PP PP + P PP P + T P P S+R
Sbjct: 242 PERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSA 301
Query: 660 XXXNFXPRXPTXPXPPXX*RKXXACHPXKNXXPXXNLXTXPXPXXSS 800
+ P P PP R+ P N +L P P S+
Sbjct: 302 AALAANKKRPPPPPPPS--RRNRGKPPIGNGSSNSSLPPPPPPPRSN 346
Score = 30.3 bits (65), Expect = 0.43
Identities = 42/182 (23%), Positives = 50/182 (27%), Gaps = 7/182 (3%)
Frame = +2
Query: 332 PPXXPGXKKTPX-PLXSKXRPXPXPKKTNX----PXXSKXXXXXXXXXXXXXXXXXXPPX 496
PP P + P S P P P +N P S PP
Sbjct: 233 PPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPL 292
Query: 497 PXXEXPPPPAPXXXXSPXXAXXPPPLXGAPXAXXTXPLXN--PXPXXXPPFGPPPGLXXX 670
P P + PPP + P+ N PP PP
Sbjct: 293 PP---PSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAG 349
Query: 671 LLPPGPXXPXTPPPXKKXXGXSPXKKPXPPXKFGNXTXXXXFLPPAPXPXPHXPXXXAPX 850
+P P PPP S ++P PP PPAP P P AP
Sbjct: 350 SIPLPPQGRSAPPPPPPRSAPSTGRQP-PPLSSSRAVSN----PPAPPPA--IPGRSAPA 402
Query: 851 SP 856
P
Sbjct: 403 LP 404
Score = 27.5 bits (58), Expect = 3.0
Identities = 19/68 (27%), Positives = 20/68 (29%), Gaps = 1/68 (1%)
Frame = +2
Query: 488 PPXPXXEXPPPPAPXXXXS-PXXAXXPPPLXGAPXAXXTXPLXNPXPXXXPPFGPPPGLX 664
PP PP P S P A PPL + P P PP P P
Sbjct: 420 PPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPA 479
Query: 665 XXLLPPGP 688
P P
Sbjct: 480 PAPAPAAP 487
Score = 26.2 bits (55), Expect = 7.0
Identities = 19/64 (29%), Positives = 19/64 (29%), Gaps = 2/64 (3%)
Frame = +3
Query: 468 PXXXPHXPPXPXGKXXPPXPPXTXXPPDXPXXPPPXXGHP--PPXXHXLX*TPXXPXXPX 641
P P PP P PP P PP G P PP P P P
Sbjct: 425 PSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAP-APA 483
Query: 642 SARP 653
A P
Sbjct: 484 PAAP 487
Score = 25.8 bits (54), Expect = 9.2
Identities = 17/62 (27%), Positives = 22/62 (35%)
Frame = +2
Query: 677 PPGPXXPXTPPPXKKXXGXSPXKKPXPPXKFGNXTXXXXFLPPAPXPXPHXPXXXAPXSP 856
P P P + PP + +P P PP G + PP P P P P
Sbjct: 231 PIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSS-----PPNSPPRPIAPVSMNPAIN 285
Query: 857 TT 862
+T
Sbjct: 286 ST 287
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 35.5 bits (78), Expect = 0.011
Identities = 21/60 (35%), Positives = 23/60 (38%), Gaps = 2/60 (3%)
Frame = +3
Query: 516 PPXPPXTXXPPDX--PXXPPPXXGHPPPXXHXLX*TPXXPXXPXSARPPGXXXNFXPRXP 689
PP P + PP P PPP PPP P P P SA PP + P P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPS-----APPMPAGPPSAPPPPLPASSAPSVP 1744
Score = 31.5 bits (68), Expect = 0.19
Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Frame = +2
Query: 488 PPXPXXEXPPPPAPXXXXSPXXAXXPP-PLXGAP 586
PP P PPP AP P A PP P AP
Sbjct: 1708 PPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAP 1741
Score = 30.7 bits (66), Expect = 0.32
Identities = 14/43 (32%), Positives = 18/43 (41%)
Frame = +1
Query: 481 PTXPXPPXGXTXPPXPRXPTLPXTXXGPPPPXXGTXRXXNTPS 609
PT P PP + PP P P +P PPP + P+
Sbjct: 1705 PTPPPPPM--SVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPN 1745
Score = 28.7 bits (61), Expect = 1.3
Identities = 12/35 (34%), Positives = 12/35 (34%)
Frame = +3
Query: 489 PPXPXGKXXPPXPPXTXXPPDXPXXPPPXXGHPPP 593
PP PP P PP P P PPP
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPP 1733
Score = 27.5 bits (58), Expect = 3.0
Identities = 14/46 (30%), Positives = 15/46 (32%)
Frame = +2
Query: 623 PXXXPPFGPPPGLXXXLLPPGPXXPXTPPPXKKXXGXSPXKKPXPP 760
P P PP + PP P PPP P P PP
Sbjct: 1690 PPVRPQSAAPPQMSAPT-PPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 25.8 bits (54), Expect = 9.2
Identities = 14/58 (24%), Positives = 17/58 (29%)
Frame = +3
Query: 414 TRPXXPKXTLSXXXXXXXPXXXPHXPPXPXGKXXPPXPPXTXXPPDXPXXPPPXXGHP 587
T P P+ P P P P P P + PP P P +P
Sbjct: 1689 TPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 33.9 bits (74), Expect = 0.035
Identities = 23/85 (27%), Positives = 26/85 (30%), Gaps = 2/85 (2%)
Frame = +2
Query: 512 PPPPAPXXXXSPXXAXXPPPLXGAPXAXXTXPLXNPXPXXXPPFGPP--PGLXXXLLPPG 685
P PP P P + P P P P+ + P PP P P
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSA 187
Query: 686 PXXPXTPPPXKKXXGXSPXKKPXPP 760
P P PP P K P PP
Sbjct: 188 PSLPSAVPP-------MPPKVPPPP 205
Score = 31.1 bits (67), Expect = 0.25
Identities = 35/131 (26%), Positives = 41/131 (31%), Gaps = 8/131 (6%)
Frame = +2
Query: 488 PPXPXXEXPPPPAPXXXXS---PXXAXXPP-PLXGAPXAXXTXPLXNPX-PXXXPPFGPP 652
PP P E PP + S P A PP P P P P P PP P
Sbjct: 130 PPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPS 189
Query: 653 PGLXXXLLPPGPXXPXTPPPXKKXXGXSPXKKP---XPPXKFGNXTXXXXFLPPAPXPXP 823
+PP P PPP + + +P PP G+ P P P
Sbjct: 190 ---LPSAVPPMPPK-VPPPPLSQAPVANTSSRPSSFAPPA--GHAPNVTSESPKFPNRGP 243
Query: 824 HXPXXXAPXSP 856
P P P
Sbjct: 244 SIPSASVPPVP 254
Score = 26.2 bits (55), Expect = 7.0
Identities = 14/57 (24%), Positives = 18/57 (31%)
Frame = +2
Query: 677 PPGPXXPXTPPPXKKXXGXSPXKKPXPPXKFGNXTXXXXFLPPAPXPXPHXPXXXAP 847
PP P TP + +P + PP + PP P P AP
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAP 180
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 33.5 bits (73), Expect = 0.046
Identities = 23/63 (36%), Positives = 24/63 (38%)
Frame = +3
Query: 519 PXPPXTXXPPDXPXXPPPXXGHPPPXXHXLX*TPXXPXXPXSARPPGXXXNFXPRXPTXP 698
P PP T PP P PP G P + P P P A PPG F P P P
Sbjct: 492 PLPPTTFAPPGVPL--PPIPGAPGMPNLNMSQPPMVP--PGMALPPGMPAPF-PGYPAVP 546
Query: 699 XPP 707
P
Sbjct: 547 AMP 549
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 33.1 bits (72), Expect = 0.061
Identities = 29/95 (30%), Positives = 30/95 (31%)
Frame = -3
Query: 846 GAXXXGXWGXGXGAGGRKXLXXVWXPNFXGGXGFLXGDXPXXFFXGGGVXGXXGPGGRSX 667
G G G G G+GG P GG G G GG GPGG
Sbjct: 184 GHNGGGFGGFGGGSGG--------PPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEG 235
Query: 666 XXSPGGGPXGGXXXGXGFXRGXVXXAXGAPXRGGG 562
GG GG G G G G P GG
Sbjct: 236 GPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGG 270
Score = 33.1 bits (72), Expect = 0.061
Identities = 26/80 (32%), Positives = 26/80 (32%), Gaps = 6/80 (7%)
Frame = -3
Query: 717 FXGGGVXGXXGPGGRSXXXSPGG-----GPXGGXXXGXGFXRGXVXXAXGAPXR-GGGXX 556
F GG GPGG GG G GG G G G G P GGG
Sbjct: 193 FGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLG 252
Query: 555 AXXGEXXXXGAGGGGXSXXG 496
G G G GG G
Sbjct: 253 GFGGGPGGFGGGPGGHGGPG 272
Score = 29.9 bits (64), Expect = 0.57
Identities = 22/71 (30%), Positives = 22/71 (30%)
Frame = -3
Query: 708 GGVXGXXGPGGRSXXXSPGGGPXGGXXXGXGFXRGXVXXAXGAPXRGGGXXAXXGEXXXX 529
GG G G G PGG G G G G G P GG G
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGP--GGFEGGPGGFGGGP 244
Query: 528 GAGGGGXSXXG 496
G GGG G
Sbjct: 245 GGFGGGLGGFG 255
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 32.7 bits (71), Expect = 0.080
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +3
Query: 498 PXGKXXPPXPPXTXXPPDXPXXPPP 572
P G PP PP PP P PPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 27.9 bits (59), Expect = 2.3
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +2
Query: 674 LPPGPXXPXTPPPXKKXXGXSPXKKPXPP 760
LPPG P PPP G P +P PP
Sbjct: 4 LPPGNPPPPPPPP-----GFEPPSQPPPP 27
Score = 26.6 bits (56), Expect = 5.3
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +2
Query: 623 PXXXPPFGPPPGLXXXLLPPGPXXP 697
P PP PPPG PP P P
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 26.2 bits (55), Expect = 7.0
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +1
Query: 451 PPPPHXXFXXPTXPXPP 501
PPPP F P+ P PP
Sbjct: 11 PPPPPPGFEPPSQPPPP 27
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 32.3 bits (70), Expect = 0.11
Identities = 26/81 (32%), Positives = 28/81 (34%)
Frame = +2
Query: 515 PPPAPXXXXSPXXAXXPPPLXGAPXAXXTXPLXNPXPXXXPPFGPPPGLXXXLLPPGPXX 694
PPP P P A P P+ P P PP PPPG+ PP P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPV----------PPPAPIMGGPPPPPPPPGVAGAGPPPPP-- 779
Query: 695 PXTPPPXKKXXGXSPXKKPXP 757
PPP G S P P
Sbjct: 780 ---PPPPAVSAGGSRYYAPAP 797
Score = 31.5 bits (68), Expect = 0.19
Identities = 23/75 (30%), Positives = 24/75 (32%), Gaps = 3/75 (4%)
Frame = +3
Query: 489 PPXPXGKXXP-PXPPXTXXPPDXP--XXPPPXXGHPPPXXHXLX*TPXXPXXPXSARPPG 659
PP P P P P PP P PPP PPP P P P A G
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPP----PPPPPGVAGAGPPPPPPPPPAVSAG 788
Query: 660 XXXNFXPRXPTXPXP 704
+ P P P
Sbjct: 789 GSRYYAPAPQAEPEP 803
Score = 30.7 bits (66), Expect = 0.32
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = +3
Query: 468 PXXXPHXPPXPXGKXXPPXPPXTXXPPDXPXXPPPXXGHPPP 593
P P PP P PP PP P PPP PPP
Sbjct: 746 PAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPP----PPP 783
Score = 29.5 bits (63), Expect = 0.75
Identities = 19/56 (33%), Positives = 20/56 (35%), Gaps = 8/56 (14%)
Frame = +1
Query: 430 QKXPFXXPPPPHXXFXXPT-----XPXPPXGXT---XPPXPRXPTLPXTXXGPPPP 573
QK PPPP PT P PP PP P P + PPPP
Sbjct: 725 QKLLLKSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 29.1 bits (62), Expect = 0.99
Identities = 21/75 (28%), Positives = 24/75 (32%), Gaps = 3/75 (4%)
Frame = +2
Query: 608 LXNPXPXXXPPFGPPPG-LXXXLLPPGPXX--PXTPPPXKKXXGXSPXKKPXPPXKFGNX 778
L +P P P P + PP P P PPP G P P PP
Sbjct: 729 LKSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVS-- 786
Query: 779 TXXXXFLPPAPXPXP 823
+ PAP P
Sbjct: 787 AGGSRYYAPAPQAEP 801
Score = 25.8 bits (54), Expect = 9.2
Identities = 13/41 (31%), Positives = 13/41 (31%)
Frame = +1
Query: 439 PFXXPPPPHXXFXXPTXPXPPXGXTXPPXPRXPTLPXTXXG 561
P PPP P P PP P P P P G
Sbjct: 748 PIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAG 788
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 30.7 bits (66), Expect = 0.32
Identities = 19/52 (36%), Positives = 21/52 (40%), Gaps = 2/52 (3%)
Frame = -2
Query: 616 VXXRXCXXGGGCPXXGGGXXGXSGGXXVXGGXGG-XXFPXGXG-GXWGXKXG 467
+ R C P GGG G GG GG GG F G G G G + G
Sbjct: 431 IAGRPCRLDFSTPRTGGGSRGGRGGFGGRGGFGGRGGFGGGRGRGRGGARSG 482
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 29.5 bits (63), Expect = 0.75
Identities = 28/95 (29%), Positives = 30/95 (31%), Gaps = 2/95 (2%)
Frame = +2
Query: 488 PPXPXXEXPPP--PAPXXXXSPXXAXXPPPLXGAPXAXXTXPLXNPXPXXXPPFGPPPGL 661
PP P P P P P PPP+ P P + P P PPP
Sbjct: 260 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMP--PPP-- 315
Query: 662 XXXLLPPGPXXPXTPPPXKKXXGXSPXKKPXPPXK 766
PG P PPP G P PP K
Sbjct: 316 --MHHEPGEHMP--PPPMHHEPG---EHMPPPPFK 343
Score = 29.1 bits (62), Expect = 0.99
Identities = 34/125 (27%), Positives = 37/125 (29%), Gaps = 2/125 (1%)
Frame = +2
Query: 488 PPXPXXEXPPP--PAPXXXXSPXXAXXPPPLXGAPXAXXTXPLXNPXPXXXPPFGPPPGL 661
PP P P P P P PPP+ P P + P P PPP
Sbjct: 208 PPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMP--PPP-- 263
Query: 662 XXXLLPPGPXXPXTPPPXKKXXGXSPXKKPXPPXKFGNXTXXXXFLPPAPXPXPHXPXXX 841
PG P PPP G P PP +P P P H P
Sbjct: 264 --MHHEPGEHMP--PPPMHHEPG---EHMPPPPMHH----EPGEHMP--PPPMHHEPGEH 310
Query: 842 APXSP 856
P P
Sbjct: 311 MPPPP 315
>SPBC19C7.05 |||cell wall organization protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 150
Score = 29.5 bits (63), Expect = 0.75
Identities = 15/50 (30%), Positives = 18/50 (36%)
Frame = +2
Query: 563 PPPLXGAPXAXXTXPLXNPXPXXXPPFGPPPGLXXXLLPPGPXXPXTPPP 712
PPP P A + NP P + PPP +P PPP
Sbjct: 79 PPPYTAEPEARYNSTIHNPMPPMSQAYRPPP-TEPPTVPAYETSSEFPPP 127
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 29.5 bits (63), Expect = 0.75
Identities = 20/79 (25%), Positives = 25/79 (31%), Gaps = 3/79 (3%)
Frame = +3
Query: 480 PHXPPXPXGKXXP--PXPPXTXXPPDXPXXPPPXXGHPPPXXHXLX*TPXXPXXPXS-AR 650
P P P P P PP P+ P P P P + P P P + +
Sbjct: 575 PQPPVAPVAPEVPSVPQPPVAPVVPEAPSVPQPPVAPVAPEVPSVPQRPAVPVVPEAPSV 634
Query: 651 PPGXXXNFXPRXPTXPXPP 707
P P P+ P P
Sbjct: 635 PQPPAAPVVPEVPSVPQRP 653
Score = 26.2 bits (55), Expect = 7.0
Identities = 17/60 (28%), Positives = 18/60 (30%)
Frame = +3
Query: 528 PXTXXPPDXPXXPPPXXGHPPPXXHXLX*TPXXPXXPXSARPPGXXXNFXPRXPTXPXPP 707
P PP P P H PP P P P A P P+ P P P
Sbjct: 512 PSVPQPPAAPVVPEAPSVHQPPAAPVAPEVPSAPQRP--AAPVVPEAPSVPQRPAVPVVP 569
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 27.5 bits (58), Expect = 3.0
Identities = 30/130 (23%), Positives = 33/130 (25%), Gaps = 8/130 (6%)
Frame = +2
Query: 497 PXXEXPPPPAPXXXXSPXXAXXPPPLXGAPXAXXTXPLXNPXPXXXPPFGP------PPG 658
P PP A S PPP P A P G PP
Sbjct: 167 PPPSFQPPSAAAPATSLPSDYNPPPPPPPPPAVEDQAADANEPDDYYSSGRAVSPEIPPT 226
Query: 659 LXXXLLPPGPXXPXTPPPXKKXXGXSPXKKPXPPXKFGNXTXXXXFLPP--APXPXPHXP 832
P P P PPP + + P P N PP P P P
Sbjct: 227 YTPKQADPLPAPPPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPPATPSQPPRPP 286
Query: 833 XXXAPXSPTT 862
+ S T
Sbjct: 287 TNASTRSTGT 296
Score = 26.2 bits (55), Expect = 7.0
Identities = 17/68 (25%), Positives = 19/68 (27%)
Frame = +3
Query: 504 GKXXPPXPPXTXXPPDXPXXPPPXXGHPPPXXHXLX*TPXXPXXPXSARPPGXXXNFXPR 683
G+ P P T P P P PP T P + G N P
Sbjct: 216 GRAVSPEIPPTYTPKQADPLPAPPPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPP 275
Query: 684 XPTXPXPP 707
T PP
Sbjct: 276 PATPSQPP 283
>SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 204
Score = 27.5 bits (58), Expect = 3.0
Identities = 23/99 (23%), Positives = 26/99 (26%), Gaps = 6/99 (6%)
Frame = +2
Query: 569 PLXGAPXAXXTXPLXNPXPXXXPPFGPPPGLXXXLLPPGP------XXPXTPPPXKKXXG 730
P P T P PP GPPP P P P P +
Sbjct: 36 PQWECPVRGLTIPPPPSVDHSAPPSGPPPSYSNSAAPATPAASASSAAPAPAPAASQNRA 95
Query: 731 XSPXKKPXPPXKFGNXTXXXXFLPPAPXPXPHXPXXXAP 847
+P PP G + P P P P P
Sbjct: 96 YGAAPQPYPPQ--GGYPQQPYYYPNQPNYYPAQPAYAQP 132
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 26.6 bits (56), Expect = 5.3
Identities = 14/61 (22%), Positives = 19/61 (31%)
Frame = +3
Query: 516 PPXPPXTXXPPDXPXXPPPXXGHPPPXXHXLX*TPXXPXXPXSARPPGXXXNFXPRXPTX 695
P P P P P HPPP +P P P + N+ + +
Sbjct: 721 PAIKPQVTPAPPTPAPTPAVKHHPPPPPVRSSISPSMPPAPLTHANSSTPMNYVSQPESP 780
Query: 696 P 698
P
Sbjct: 781 P 781
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 26.6 bits (56), Expect = 5.3
Identities = 17/48 (35%), Positives = 18/48 (37%), Gaps = 1/48 (2%)
Frame = -1
Query: 938 GXRXXSHSXXXFXXGGXGXGXXXXGXLLGXGEXXX-GXXGGXGGAQGG 798
G R S GG G G G G G GG GGA+GG
Sbjct: 9 GGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGG 56
Score = 25.8 bits (54), Expect = 9.2
Identities = 13/37 (35%), Positives = 15/37 (40%)
Frame = -1
Query: 905 FXXGGXGXGXXXXGXLLGXGEXXXGXXGGXGGAQGGG 795
+ G G G G G GG GGA+GGG
Sbjct: 3 YTPGSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGGG 39
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 26.6 bits (56), Expect = 5.3
Identities = 18/47 (38%), Positives = 18/47 (38%)
Frame = -2
Query: 655 GGRAEXGXXGWXGVXXRXCXXGGGCPXXGGGXXGXSGGXXVXGGXGG 515
GGR G G G R GG GGG G S G G GG
Sbjct: 145 GGRG--GSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGGSRGG 189
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 26.2 bits (55), Expect = 7.0
Identities = 14/38 (36%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Frame = +3
Query: 480 PHXPPXPXGKXXPPXP-PXTXXPPDXPXXPPPXXGHPP 590
P PP P + P P P PD P P G PP
Sbjct: 104 PREPPLP-NEPVPEEPLPGEPPLPDEPVPEEPLPGEPP 140
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,662,035
Number of Sequences: 5004
Number of extensions: 25911
Number of successful extensions: 347
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 142
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 499296500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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