Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_A16
         (955 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M81757-1|AAA89070.1|  145|Homo sapiens S19 ribosomal protein pro...    44   8e-04
BC018616-1|AAH18616.1|  145|Homo sapiens ribosomal protein S19 p...    44   8e-04
BC017386-1|AAH17386.1|  157|Homo sapiens ribosomal protein S19 p...    44   8e-04
BC007615-1|AAH07615.1|  145|Homo sapiens ribosomal protein S19 p...    44   8e-04
BC000023-1|AAH00023.1|  145|Homo sapiens ribosomal protein S19 p...    44   8e-04
AF092907-1|AAD13668.1|  145|Homo sapiens ribosomal protein S19 p...    44   8e-04

>M81757-1|AAA89070.1|  145|Homo sapiens S19 ribosomal protein
           protein.
          Length = 145

 Score = 44.0 bits (99), Expect = 8e-04
 Identities = 26/66 (39%), Positives = 36/66 (54%)
 Frame = +1

Query: 370 GGXQXXGS*XLXFSXGXQAVXAPKXXQSXKAXNLVXKXQDGGXXLTXQGKXNLXKIAAQV 549
           GG Q  G     FS G ++V A +  Q+ +   +V K QDGG  LT QG+ +L +IA QV
Sbjct: 80  GGRQRNGVMPSHFSRGSKSV-ARRVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRIAGQV 138

Query: 550 RLKAKQ 567
               K+
Sbjct: 139 AAANKK 144


>BC018616-1|AAH18616.1|  145|Homo sapiens ribosomal protein S19
           protein.
          Length = 145

 Score = 44.0 bits (99), Expect = 8e-04
 Identities = 26/66 (39%), Positives = 36/66 (54%)
 Frame = +1

Query: 370 GGXQXXGS*XLXFSXGXQAVXAPKXXQSXKAXNLVXKXQDGGXXLTXQGKXNLXKIAAQV 549
           GG Q  G     FS G ++V A +  Q+ +   +V K QDGG  LT QG+ +L +IA QV
Sbjct: 80  GGRQRNGVMPSHFSRGSKSV-ARRVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRIAGQV 138

Query: 550 RLKAKQ 567
               K+
Sbjct: 139 AAANKK 144


>BC017386-1|AAH17386.1|  157|Homo sapiens ribosomal protein S19
           protein.
          Length = 157

 Score = 44.0 bits (99), Expect = 8e-04
 Identities = 26/66 (39%), Positives = 36/66 (54%)
 Frame = +1

Query: 370 GGXQXXGS*XLXFSXGXQAVXAPKXXQSXKAXNLVXKXQDGGXXLTXQGKXNLXKIAAQV 549
           GG Q  G     FS G ++V A +  Q+ +   +V K QDGG  LT QG+ +L +IA QV
Sbjct: 92  GGRQRNGVMPSHFSRGSKSV-ARRVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRIAGQV 150

Query: 550 RLKAKQ 567
               K+
Sbjct: 151 AAANKK 156


>BC007615-1|AAH07615.1|  145|Homo sapiens ribosomal protein S19
           protein.
          Length = 145

 Score = 44.0 bits (99), Expect = 8e-04
 Identities = 26/66 (39%), Positives = 36/66 (54%)
 Frame = +1

Query: 370 GGXQXXGS*XLXFSXGXQAVXAPKXXQSXKAXNLVXKXQDGGXXLTXQGKXNLXKIAAQV 549
           GG Q  G     FS G ++V A +  Q+ +   +V K QDGG  LT QG+ +L +IA QV
Sbjct: 80  GGRQRNGVMPSHFSRGSKSV-ARRVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRIAGQV 138

Query: 550 RLKAKQ 567
               K+
Sbjct: 139 AAANKK 144


>BC000023-1|AAH00023.1|  145|Homo sapiens ribosomal protein S19
           protein.
          Length = 145

 Score = 44.0 bits (99), Expect = 8e-04
 Identities = 26/66 (39%), Positives = 36/66 (54%)
 Frame = +1

Query: 370 GGXQXXGS*XLXFSXGXQAVXAPKXXQSXKAXNLVXKXQDGGXXLTXQGKXNLXKIAAQV 549
           GG Q  G     FS G ++V A +  Q+ +   +V K QDGG  LT QG+ +L +IA QV
Sbjct: 80  GGRQRNGVMPSHFSRGSKSV-ARRVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRIAGQV 138

Query: 550 RLKAKQ 567
               K+
Sbjct: 139 AAANKK 144


>AF092907-1|AAD13668.1|  145|Homo sapiens ribosomal protein S19
           protein.
          Length = 145

 Score = 44.0 bits (99), Expect = 8e-04
 Identities = 26/66 (39%), Positives = 36/66 (54%)
 Frame = +1

Query: 370 GGXQXXGS*XLXFSXGXQAVXAPKXXQSXKAXNLVXKXQDGGXXLTXQGKXNLXKIAAQV 549
           GG Q  G     FS G ++V A +  Q+ +   +V K QDGG  LT QG+ +L +IA QV
Sbjct: 80  GGRQRNGVMPSHFSRGSKSV-ARRVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRIAGQV 138

Query: 550 RLKAKQ 567
               K+
Sbjct: 139 AAANKK 144


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,916,997
Number of Sequences: 237096
Number of extensions: 1138714
Number of successful extensions: 1319
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1122
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1260
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12603135794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)