Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_A16
         (955 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119257-1|AAM51117.1|  155|Drosophila melanogaster SD22440p pro...    40   0.005
AE014297-3411|AAN13960.1|  155|Drosophila melanogaster CG5338-PB...    40   0.005

>AY119257-1|AAM51117.1|  155|Drosophila melanogaster SD22440p
           protein.
          Length = 155

 Score = 39.9 bits (89), Expect = 0.005
 Identities = 18/52 (34%), Positives = 32/52 (61%)
 Frame = +1

Query: 439 KXXQSXKAXNLVXKXQDGGXXLTXQGKXNLXKIAAQVRLKAKQQAKXQVMVL 594
           K  Q+ +A N+V +  DGG  LT QG+ NL +IA ++  K ++++    M++
Sbjct: 102 KALQALEAANMVERHPDGGRKLTPQGQRNLDRIANKIVAKQRERSAPVSMII 153


>AE014297-3411|AAN13960.1|  155|Drosophila melanogaster CG5338-PB
           protein.
          Length = 155

 Score = 39.9 bits (89), Expect = 0.005
 Identities = 18/52 (34%), Positives = 32/52 (61%)
 Frame = +1

Query: 439 KXXQSXKAXNLVXKXQDGGXXLTXQGKXNLXKIAAQVRLKAKQQAKXQVMVL 594
           K  Q+ +A N+V +  DGG  LT QG+ NL +IA ++  K ++++    M++
Sbjct: 102 KALQALEAANMVERHPDGGRKLTPQGQRNLDRIANKIVAKQRERSAPVSMII 153


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,844,732
Number of Sequences: 53049
Number of extensions: 283668
Number of successful extensions: 413
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 397
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 413
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4751175096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)