Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_A15
(913 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 31 0.86
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 30 2.6
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z74033-3|CAA98477.1| 407|Caenorhabditis elegans Hypothetical pr... 29 3.5
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 29 3.5
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 4.6
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 28 8.1
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 31.5 bits (68), Expect = 0.86
Identities = 18/46 (39%), Positives = 18/46 (39%)
Frame = -1
Query: 754 GXTSXGGEGXGRFKXGXK*GGGXGXXXGGVGXGCXPXGXRXXKXGG 617
G GG G G G GGG G GG G G G R GG
Sbjct: 82 GGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGGGGRGGGGGG 127
Score = 30.3 bits (65), Expect = 2.0
Identities = 17/46 (36%), Positives = 18/46 (39%)
Frame = -1
Query: 754 GXTSXGGEGXGRFKXGXK*GGGXGXXXGGVGXGCXPXGXRXXKXGG 617
G GG G G G + GGG G GG G G G GG
Sbjct: 87 GGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGGGGRGGGGGGRGGGG 132
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 29.9 bits (64), Expect = 2.6
Identities = 21/68 (30%), Positives = 21/68 (30%)
Frame = -1
Query: 754 GXTSXGGEGXGRFKXGXK*GGGXGXXXGGVGXGCXPXGXRXXKXGGXKXXXQXXVXAXGG 575
G GG G G G GGG GG G GC P GG GG
Sbjct: 76 GGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGCGG 135
Query: 574 AXXKXXGG 551
GG
Sbjct: 136 GGGGGCGG 143
Score = 29.9 bits (64), Expect = 2.6
Identities = 22/68 (32%), Positives = 22/68 (32%)
Frame = -1
Query: 754 GXTSXGGEGXGRFKXGXK*GGGXGXXXGGVGXGCXPXGXRXXKXGGXKXXXQXXVXAXGG 575
G GG G G G GGG G GG G GC G GG GG
Sbjct: 120 GGCGGGGGGCG----GGCGGGGGGGCGGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGG 175
Query: 574 AXXKXXGG 551
GG
Sbjct: 176 GGCGGGGG 183
Score = 28.7 bits (61), Expect = 6.1
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = -1
Query: 745 SXGGEGXGRFKXGXK*GGGXGXXXGGVGXGCXP 647
S GG G G G GGG GG G GC P
Sbjct: 22 SGGGGGGGGGCGGGCGGGGGCGGGGGCGGGCAP 54
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical
protein C56A3.1 protein.
Length = 393
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = -1
Query: 754 GXTSXGGEGXGRFKXGXK*GGGXGXXXGGVGXGCXPXG 641
G GG G G G GGG G GG G GC G
Sbjct: 91 GGGGCGGGGGGCGGGGGCGGGGGGGCGGGGGGGCGGGG 128
>Z74033-3|CAA98477.1| 407|Caenorhabditis elegans Hypothetical
protein F38B7.3 protein.
Length = 407
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +2
Query: 464 PPPXNPXXNPXQXGXGAXXKRXXXKKXXXPPPXFXXGPP 580
P P NP N Q G GA + PP + PP
Sbjct: 135 PKPANPPPNAPQQGPGAQPPQQQNNGGYVPPTVYPSAPP 173
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = -1
Query: 754 GXTSXGGEGXGRFKXGXK*GGGXGXXXGGVGXG 656
G GG G G + G GGG G GG+G G
Sbjct: 171 GGGGYGGGGDGGYGGGGFGGGGMGGYGGGMGGG 203
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.1 bits (62), Expect = 4.6
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = -1
Query: 754 GXTSXGGEGXGRFKXGXK*GGGXGXXXGGVGXGC 653
G GG G G G GGG G GG G GC
Sbjct: 106 GGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGC 139
Score = 28.3 bits (60), Expect = 8.1
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -1
Query: 754 GXTSXGGEGXGRFKXGXK*GGGXGXXXGGVGXGCXPXG 641
G GG G G G GG G GG G GC G
Sbjct: 130 GCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGG 167
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.1 bits (62), Expect = 4.6
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = -1
Query: 754 GXTSXGGEGXGRFKXGXK*GGGXGXXXGGVGXGC 653
G GG G G G GGG G GG G GC
Sbjct: 106 GGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGC 139
Score = 28.3 bits (60), Expect = 8.1
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -1
Query: 754 GXTSXGGEGXGRFKXGXK*GGGXGXXXGGVGXGCXPXG 641
G GG G G G GG G GG G GC G
Sbjct: 130 GCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGG 167
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 29.1 bits (62), Expect = 4.6
Identities = 16/54 (29%), Positives = 19/54 (35%)
Frame = +1
Query: 619 PXISXXXXPRGXTPXQPPPXXHXXXPLTXHXF*SAXSPPPPGXXPPKXXPPXLP 780
P S P P PPP + + SPPPP PP P +P
Sbjct: 459 PSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVP 512
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 28.3 bits (60), Expect = 8.1
Identities = 20/63 (31%), Positives = 21/63 (33%)
Frame = -1
Query: 739 GGEGXGRFKXGXK*GGGXGXXXGGVGXGCXPXGXRXXKXGGXKXXXQXXVXAXGGAXXKX 560
GG G GR G GGG G GG G G G G GG+
Sbjct: 54 GGRGGGRGGSGGGRGGGSGGGRGGSG-GAGAGGSGSGSGGWGGQDGGSSAGGWGGSQGGS 112
Query: 559 XGG 551
GG
Sbjct: 113 QGG 115
Score = 28.3 bits (60), Expect = 8.1
Identities = 21/68 (30%), Positives = 22/68 (32%)
Frame = -1
Query: 754 GXTSXGGEGXGRFKXGXK*GGGXGXXXGGVGXGCXPXGXRXXKXGGXKXXXQXXVXAXGG 575
G S G G G + G GGG G G G G G GG Q GG
Sbjct: 140 GGNSNAG-GWGGSQGGQNGGGGRGGSGGQGGWGGSQDGGSQGGWGGQNGGGQGGNQGGGG 198
Query: 574 AXXKXXGG 551
GG
Sbjct: 199 GRGGNQGG 206
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,423,162
Number of Sequences: 27780
Number of extensions: 172516
Number of successful extensions: 781
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 372
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 717
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2328783996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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