Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_A14
         (858 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z46381-2|CAA86515.1|  202|Caenorhabditis elegans Hypothetical pr...   223   2e-58
U31528-1|AAA74904.1|  202|Caenorhabditis elegans 60S ribosomal p...   223   2e-58
AF077531-4|AAC64611.1|  437|Caenorhabditis elegans Hypothetical ...    30   1.8  
AL132948-1|CAC51077.1|  735|Caenorhabditis elegans Hypothetical ...    30   2.4  
U64848-10|AAB04888.1|  168|Caenorhabditis elegans Hypothetical p...    28   9.8  

>Z46381-2|CAA86515.1|  202|Caenorhabditis elegans Hypothetical
           protein M01F1.2 protein.
          Length = 202

 Score =  223 bits (544), Expect = 2e-58
 Identities = 103/197 (52%), Positives = 137/197 (69%)
 Frame = +3

Query: 81  LXNKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKR 260
           L N+AI+IDG+ HLLGRLA+++AK LL+G+KVVV+R E+I ISGNF R+KLK MSFLRKR
Sbjct: 3   LSNRAIIIDGKNHLLGRLASIVAKKLLQGDKVVVLRAEEIVISGNFHRSKLKYMSFLRKR 62

Query: 261 CNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXP 440
           CN+NPARG FH+RAP KI W+TVRGM+PHKT RG  AL+ LR Y+G P  +        P
Sbjct: 63  CNINPARGAFHYRAPGKIFWRTVRGMLPHKTNRGNEALKNLRAYEGVPAKYQKTKSLHAP 122

Query: 441 AALRVFCLKPGRNYCHVGXLSHEIGWKYRDVVRKLEDXRKGKAVXRVAYEKTLXRITXDA 620
           +A R F L+P R +C VG LSHE+GW+++DVV KLE  RK K       +K + ++   A
Sbjct: 123 SASR-FRLQPRRKFCVVGRLSHEVGWQFQDVVAKLEAKRKVKGAAYFEQKKKMDKLAVQA 181

Query: 621 GEXVSKATTPFTTIXQS 671
            +  +     +  I ++
Sbjct: 182 KKNAAPKIAQYQKIIEA 198


>U31528-1|AAA74904.1|  202|Caenorhabditis elegans 60S ribosomal
           protein L13A protein.
          Length = 202

 Score =  223 bits (544), Expect = 2e-58
 Identities = 103/197 (52%), Positives = 137/197 (69%)
 Frame = +3

Query: 81  LXNKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKR 260
           L N+AI+IDG+ HLLGRLA+++AK LL+G+KVVV+R E+I ISGNF R+KLK MSFLRKR
Sbjct: 3   LSNRAIIIDGKNHLLGRLASIVAKKLLQGDKVVVLRAEEIVISGNFHRSKLKYMSFLRKR 62

Query: 261 CNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXP 440
           CN+NPARG FH+RAP KI W+TVRGM+PHKT RG  AL+ LR Y+G P  +        P
Sbjct: 63  CNINPARGAFHYRAPGKIFWRTVRGMLPHKTNRGNEALKNLRAYEGVPAKYQKTKSLHAP 122

Query: 441 AALRVFCLKPGRNYCHVGXLSHEIGWKYRDVVRKLEDXRKGKAVXRVAYEKTLXRITXDA 620
           +A R F L+P R +C VG LSHE+GW+++DVV KLE  RK K       +K + ++   A
Sbjct: 123 SASR-FRLQPRRKFCVVGRLSHEVGWQFQDVVAKLEAKRKVKGAAYFEQKKKMDKLAVQA 181

Query: 621 GEXVSKATTPFTTIXQS 671
            +  +     +  I ++
Sbjct: 182 KKNAAPKIAQYQKIIEA 198


>AF077531-4|AAC64611.1|  437|Caenorhabditis elegans Hypothetical
           protein F13C5.1 protein.
          Length = 437

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -1

Query: 564 CPSSXLQAYEQHHGISIQFHGTVXLHDSNY 475
           C S  L  +E HHGI +   G + L D++Y
Sbjct: 329 CSSGSLTHFESHHGIKLLTIGVLPLDDNSY 358


>AL132948-1|CAC51077.1|  735|Caenorhabditis elegans Hypothetical
           protein Y39B6A.1 protein.
          Length = 735

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 19/65 (29%), Positives = 25/65 (38%), Gaps = 2/65 (3%)
 Frame = -1

Query: 543 AYEQHHGISIQFHGTVXLHDS--NYGQVSDRRHVEQQAXQHVDGYQREEGTHHMYVAS*E 370
           A+  HHG     HG    H S  ++G   +  H       H  G+    G HH +  S  
Sbjct: 537 AHHGHHGEHGTHHGHHGSHHSPAHHGHHGEHHHAPAHHGHH--GHHGSHGVHHGHHESHG 594

Query: 369 HSCHA 355
           H  HA
Sbjct: 595 HGHHA 599



 Score = 28.7 bits (61), Expect = 5.6
 Identities = 16/56 (28%), Positives = 20/56 (35%)
 Frame = -1

Query: 531 HHGISIQFHGTVXLHDSNYGQVSDRRHVEQQAXQHVDGYQREEGTHHMYVAS*EHS 364
           HH      H     H   +G V  R H E     H   +  E GTHH +     H+
Sbjct: 381 HHEHKEGEHHEHAAHHDEHG-VHHRHHGEHHGTHHSPAHHGEHGTHHGHHGEHHHA 435


>U64848-10|AAB04888.1|  168|Caenorhabditis elegans Hypothetical
           protein C50E3.2 protein.
          Length = 168

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 17/52 (32%), Positives = 26/52 (50%)
 Frame = -2

Query: 542 LTNNITVFPSNFMGQSAYMTVITARFQTEDT*SSRXYNTSTVIKGRRAPIIC 387
           L NNI VFPSN + +++ MT+   R +T+    S     +  I      +IC
Sbjct: 27  LENNILVFPSN-ISEASGMTLFHGRIETK----SECRKVNATINSTLCTVIC 73


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,077,170
Number of Sequences: 27780
Number of extensions: 341364
Number of successful extensions: 1027
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 836
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1025
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2139963672
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)