Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP16_F_A11
         (876 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_02_0074 - 11461300-11461681,11461744-11462009                       31   0.92 
07_03_0636 + 20168180-20168462,20168961-20170303,20170401-201706...    31   1.6  
08_02_0725 - 20442988-20443180,20443268-20443540,20443642-204438...    30   2.1  
03_02_0631 + 9969841-9969868,9969965-9970082,9970186-9970828,997...    30   2.1  
08_01_1027 - 10373760-10373837,10373918-10374201,10374286-10374394     29   4.9  
07_01_0077 + 566895-567127,567207-567331,571204-571340,571437-57...    29   6.5  
04_01_0246 + 3225743-3226473,3226493-3226624,3227580-3227670,322...    29   6.5  
03_05_0428 + 24152409-24152783,24152885-24153139,24153204-24153917     28   8.5  

>06_02_0074 - 11461300-11461681,11461744-11462009
          Length = 215

 Score = 31.5 bits (68), Expect = 0.92
 Identities = 21/55 (38%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
 Frame = +1

Query: 274 WERAT-KDFLVKVVTTGEFFNDDRGKLTGQAYGTRVLGPGGDSTSYGGRLDWANE 435
           W R T  +   KV T G+   D RG+  G+A G    G GGD    G    WA E
Sbjct: 133 WGRRTVTEKAYKVATAGDTEGDKRGEEGGEAGGGDADGAGGDGGGKGE--GWATE 185


>07_03_0636 +
           20168180-20168462,20168961-20170303,20170401-20170678,
           20170790-20170821,20170908-20171314,20171401-20171847
          Length = 929

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 16/45 (35%), Positives = 25/45 (55%)
 Frame = +2

Query: 137 SFYASWLRREVSDHQPIFKVSPTPSRYSRLCHLGQGNGGREGLRD 271
           SF  S+L +E++  +       +PS Y+R   LG GNGG + + D
Sbjct: 708 SFARSYLVQELNIAETRLVPLNSPSDYARALELGSGNGGVDAIID 752


>08_02_0725 -
           20442988-20443180,20443268-20443540,20443642-20443853,
           20443935-20444247,20444334-20444441,20444537-20444643,
           20444743-20444781
          Length = 414

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = -2

Query: 311 TTFTKKSLVALSQSPEDLPSPHFPVPSDKVV 219
           TTF +++  A S +PE+LP P   +  D+VV
Sbjct: 233 TTFRRRTTAAASPAPEELPLPRKILDHDRVV 263


>03_02_0631 +
           9969841-9969868,9969965-9970082,9970186-9970828,
           9971146-9971935,9972002-9972051,9972618-9972704
          Length = 571

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 18/38 (47%), Positives = 23/38 (60%)
 Frame = -2

Query: 362 ACPVSLPRSSLKNSPVVTTFTKKSLVALSQSPEDLPSP 249
           AC  S+ R SLK SPVV+  +++ L   S SP D  SP
Sbjct: 414 ACRSSIDRLSLKGSPVVSGLSQRQL--SSDSPLDKLSP 449


>08_01_1027 - 10373760-10373837,10373918-10374201,10374286-10374394
          Length = 156

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = +2

Query: 515 ILVRILTCQLAEWSLXSSVTEXLMSVYXPRLLTSGNCQ 628
           I+ RIL  +  EW L S V   +M    P L  SGN +
Sbjct: 82  IMERILREEAEEWELESEVRREIMEHIFPLLRRSGNAR 119


>07_01_0077 +
           566895-567127,567207-567331,571204-571340,571437-571542,
           571635-571885,572018-572128,572209-572320,572626-572716,
           573168-573507,573678-573900,573946-574204,574274-574481,
           574572-574622,574712-574870,574956-575120,575322-575399,
           575732-576031,576107-576259,576871-576918,577019-577188,
           577738-577852,578462-578623,578789-578893,578969-579199,
           579277-579410,579484-579738,579822-580110,580214-580306,
           580395-580520,580646-580897
          Length = 1693

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
 Frame = +2

Query: 149 SWLRREVSDHQP-IFKVSPTPSRYSRLCHLGQGNGGREGLRDFGRERP 289
           SWL REV  H P  F + P P   S+    GQ N  +E  + F    P
Sbjct: 94  SWLWREVLKHNPDAFTIKPRPLPPSQDPLEGQENQNQEHEKHFAHVAP 141


>04_01_0246 +
           3225743-3226473,3226493-3226624,3227580-3227670,
           3228617-3229074,3229342-3229864
          Length = 644

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 7/65 (10%)
 Frame = +1

Query: 238 TGKWGEGRSSGLWERATK-------DFLVKVVTTGEFFNDDRGKLTGQAYGTRVLGPGGD 396
           TG+   GR+  LW+RAT        DF+ K+VT       D       +Y +RV  P   
Sbjct: 87  TGRMSYGRAVPLWDRATNEVASFATDFVFKIVTPDNVARGDGMAFFLSSYPSRV-PPKPS 145

Query: 397 STSYG 411
             S+G
Sbjct: 146 GQSFG 150


>03_05_0428 + 24152409-24152783,24152885-24153139,24153204-24153917
          Length = 447

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 18/35 (51%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +2

Query: 110 CTP-CMRERSSFYASWLRREVSDHQPIFKVSPTPS 211
           CTP     RSS YA+ L R  S  +   KVSPTPS
Sbjct: 236 CTPRTSSRRSSCYATPLCRTPSKVELYQKVSPTPS 270


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,694,188
Number of Sequences: 37544
Number of extensions: 436258
Number of successful extensions: 1305
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1236
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1304
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)