Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_A10
(925 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z74031-17|CAN86923.1| 380|Caenorhabditis elegans Hypothetical p... 36 0.054
Z74031-16|CAA98452.1| 378|Caenorhabditis elegans Hypothetical p... 36 0.054
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 31 1.5
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 31 1.5
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 31 1.5
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 30 2.7
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 30 2.7
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 29 3.6
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 3.6
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 3.6
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 3.6
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 29 4.7
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z82095-2|CAB05027.2| 602|Caenorhabditis elegans Hypothetical pr... 28 8.2
>Z74031-17|CAN86923.1| 380|Caenorhabditis elegans Hypothetical
protein F32D8.7b protein.
Length = 380
Score = 35.5 bits (78), Expect = 0.054
Identities = 15/32 (46%), Positives = 15/32 (46%)
Frame = +2
Query: 671 PXPRLEPXAPXXLPRXLPPXGXPPSXPPPVXP 766
P P L P P R LPP PP PPP P
Sbjct: 225 PAPTLAPFRPRPTTRRLPPPTTPPPPPPPPAP 256
>Z74031-16|CAA98452.1| 378|Caenorhabditis elegans Hypothetical
protein F32D8.7a protein.
Length = 378
Score = 35.5 bits (78), Expect = 0.054
Identities = 15/32 (46%), Positives = 15/32 (46%)
Frame = +2
Query: 671 PXPRLEPXAPXXLPRXLPPXGXPPSXPPPVXP 766
P P L P P R LPP PP PPP P
Sbjct: 223 PAPTLAPFRPRPTTRRLPPPTTPPPPPPPPAP 254
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 30.7 bits (66), Expect = 1.5
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +2
Query: 668 APXPRLEPXAPXXLPRXLPPXGXPPSXPPP 757
+P PR P P +PP G P + PPP
Sbjct: 764 SPVPRPAPAPPGGRQAPMPPRGGPGAPPPP 793
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 30.7 bits (66), Expect = 1.5
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +2
Query: 668 APXPRLEPXAPXXLPRXLPPXGXPPSXPPP 757
+P PR P P +PP G P + PPP
Sbjct: 764 SPVPRPAPAPPGGRQAPMPPRGGPGAPPPP 793
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 30.7 bits (66), Expect = 1.5
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +2
Query: 668 APXPRLEPXAPXXLPRXLPPXGXPPSXPPP 757
+P PR P P +PP G P + PPP
Sbjct: 764 SPVPRPAPAPPGGRQAPMPPRGGPGAPPPP 793
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 30.7 bits (66), Expect = 1.5
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +2
Query: 668 APXPRLEPXAPXXLPRXLPPXGXPPSXPPP 757
+P PR P P +PP G P + PPP
Sbjct: 764 SPVPRPAPAPPGGRQAPMPPRGGPGAPPPP 793
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 29.9 bits (64), Expect = 2.7
Identities = 20/68 (29%), Positives = 21/68 (30%)
Frame = -2
Query: 912 GWXPQCXGFFEAGXCGVXMGAGEXHAGXLGXGXCWXXXXXXXXXXGXXXGXTGGGXEGGX 733
GW Q G AG G G G G G G GG +GG
Sbjct: 134 GWGGQQGGNSNAGGWGGSQGGQNGGGGRGGSGGQGGWGGSQDGGSQGGWGGQNGGGQGGN 193
Query: 732 PXGGKXRG 709
GG RG
Sbjct: 194 QGGGGGRG 201
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/60 (28%), Positives = 20/60 (33%)
Frame = +2
Query: 689 PXAPXXLPRXLPPXGXPPSXPPPVXPXXXXXXXXXXXXXXQXIPXPKXPAWXSPAPXQTP 868
P P +PR PP PP PP P P P+ P P+P P
Sbjct: 140 PPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPS-----PEPRNPPRTPPSPIPPP 194
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 29.5 bits (63), Expect = 3.6
Identities = 20/65 (30%), Positives = 24/65 (36%), Gaps = 2/65 (3%)
Frame = +2
Query: 668 APXPRLEPXAPXXLPRXLP-PXGXPPSXPPPVXPXXXXXXXXXXXXXXQXIPXP-KXPAW 841
AP P +P P P LP P G PP P P P +P P + P
Sbjct: 63 APRPSGQPPGPQG-PSDLPGPSGAPPGPPHPSGPPHRPHPHPSRRPRPTRLPRPSRSPHS 121
Query: 842 XSPAP 856
+P P
Sbjct: 122 DAPEP 126
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.5 bits (63), Expect = 3.6
Identities = 20/74 (27%), Positives = 21/74 (28%), Gaps = 3/74 (4%)
Frame = +2
Query: 713 RXLPPXGXPPSXPPPVXPXXXXXXXXXXXXXXQXIPXPKXPAWXSPAPXQTPHXP---AS 883
R PP G PP PPP P P P P +P P S
Sbjct: 229 RQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGS 288
Query: 884 KNPXHXGXHPNXAP 925
P G P P
Sbjct: 289 PPPPRAGSPPPPPP 302
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.5 bits (63), Expect = 3.6
Identities = 20/74 (27%), Positives = 21/74 (28%), Gaps = 3/74 (4%)
Frame = +2
Query: 713 RXLPPXGXPPSXPPPVXPXXXXXXXXXXXXXXQXIPXPKXPAWXSPAPXQTPHXP---AS 883
R PP G PP PPP P P P P +P P S
Sbjct: 250 RQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGS 309
Query: 884 KNPXHXGXHPNXAP 925
P G P P
Sbjct: 310 PPPPRAGSPPPPPP 323
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.5 bits (63), Expect = 3.6
Identities = 20/74 (27%), Positives = 21/74 (28%), Gaps = 3/74 (4%)
Frame = +2
Query: 713 RXLPPXGXPPSXPPPVXPXXXXXXXXXXXXXXQXIPXPKXPAWXSPAPXQTPHXP---AS 883
R PP G PP PPP P P P P +P P S
Sbjct: 235 RQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGS 294
Query: 884 KNPXHXGXHPNXAP 925
P G P P
Sbjct: 295 PPPPRAGSPPPPPP 308
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 29.1 bits (62), Expect = 4.7
Identities = 19/71 (26%), Positives = 21/71 (29%)
Frame = +2
Query: 668 APXPRLEPXAPXXLPRXLPPXGXPPSXPPPVXPXXXXXXXXXXXXXXQXIPXPKXPAWXS 847
A P+ P P P P PPP P Q P P P +
Sbjct: 85 ASYPQNAVPVPAPPPAPYPQHAVPAPAPPPA-PYPQHAVPAPAPYQQQPPPPPPPPHYPP 143
Query: 848 PAPXQTPHXPA 880
P P P PA
Sbjct: 144 PPPHYPPPPPA 154
Score = 28.3 bits (60), Expect = 8.2
Identities = 19/77 (24%), Positives = 24/77 (31%)
Frame = +2
Query: 668 APXPRLEPXAPXXLPRXLPPXGXPPSXPPPVXPXXXXXXXXXXXXXXQXIPXPKXPAWXS 847
AP P+ AP + PP PP PPP P P +
Sbjct: 115 APYPQHAVPAPAPYQQQPPPPPPPPHYPPPPPHYPPPPPAPHSAYIDHSAPRPAYIEHSA 174
Query: 848 PAPXQTPHXPASKNPXH 898
P P P P + P +
Sbjct: 175 PPP--QPQYPQQQPPQY 189
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 28.3 bits (60), Expect = 8.2
Identities = 11/33 (33%), Positives = 14/33 (42%)
Frame = +2
Query: 668 APXPRLEPXAPXXLPRXLPPXGXPPSXPPPVXP 766
+P P P +P + P PP PPP P
Sbjct: 335 SPQPAATPVEITEIPPIISPPAPPPPPPPPPPP 367
>Z82095-2|CAB05027.2| 602|Caenorhabditis elegans Hypothetical
protein ZK849.4 protein.
Length = 602
Score = 28.3 bits (60), Expect = 8.2
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +2
Query: 689 PXAPXXLPRXLPPXGXPPSXPPP 757
P +P LP LP PP PPP
Sbjct: 484 PPSPPALPPALPNPNEPPPPPPP 506
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,140,766
Number of Sequences: 27780
Number of extensions: 201791
Number of successful extensions: 875
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 579
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 811
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2370744068
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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