Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP16_F_A02
(941 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 42 2e-04
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 37 0.005
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 36 0.008
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 36 0.008
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 26 0.021
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 34 0.033
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 34 0.033
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 33 0.077
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 29 0.72
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces... 24 1.4
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 28 1.7
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 28 2.2
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 28 2.2
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 28 2.2
SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr 1|... 26 2.8
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 27 5.1
SPBC902.04 |||RNA-binding protein|Schizosaccharomyces pombe|chr ... 26 6.7
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 26 6.7
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 26 8.8
SPBC660.05 |||conserved fungal protein|Schizosaccharomyces pombe... 26 8.8
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 41.5 bits (93), Expect = 2e-04
Identities = 19/44 (43%), Positives = 19/44 (43%), Gaps = 3/44 (6%)
Frame = +2
Query: 563 PPXXPPXXAXXPXXXPXTPPXP---PPPPXXPXXPXXPPXXPPP 685
PP P A P PP P PPPP P P PP PPP
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPP 1733
Score = 32.3 bits (70), Expect = 0.10
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +1
Query: 616 PTXPPPPPXXPXXXXXXPXXXPPPPXXPPP 705
PT PPPP P P PP PPP
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 31.9 bits (69), Expect = 0.13
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = +2
Query: 551 SXPFPPXXPPXXAXXPXXXPXTPPXPPPPPXXPXXPXXPPXXPPP 685
S P PP PP P P P PP P P P P P
Sbjct: 1703 SAPTPPP-PPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 31.9 bits (69), Expect = 0.13
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 609 PPPHXXPPPPXXPXXXXXXPXXXPPP 686
PPP PPPP P P PPP
Sbjct: 1709 PPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 30.7 bits (66), Expect = 0.31
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +3
Query: 783 PPXPPXXXPPPXPXPPXXPXXPPXXXXP 866
PP PP PPP P P P PP P
Sbjct: 1707 PPPPPMSVPPP-PSAPPMPAGPPSAPPP 1733
Score = 29.1 bits (62), Expect = 0.95
Identities = 14/46 (30%), Positives = 15/46 (32%)
Frame = +2
Query: 530 PPXXXXXSXPFPPXXPPXXAXXPXXXPXTPPXPPPPPXXPXXPXXP 667
PP + P PP P P P PPPP P P
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVP 1744
Score = 27.5 bits (58), Expect = 2.9
Identities = 19/61 (31%), Positives = 20/61 (32%)
Frame = +2
Query: 509 PXXXXXXPPXXXXXSXPFPPXXPPXXAXXPXXXPXTPPXPPPPPXXPXXPXXPPXXPPPX 688
P PP + P P P P P PP PP P P P PPP
Sbjct: 1683 PAHPVSTPPVRPQSAAP-PQMSAPTPPPPPMSVPP-PPSAPPMPAGP-----PSAPPPPL 1735
Query: 689 P 691
P
Sbjct: 1736 P 1736
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 36.7 bits (81), Expect = 0.005
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = +2
Query: 563 PPXXPPXXAXXPXXXPXTPPXPPPPPXXPXXPXXPPXXPPPXP 691
PP P P P P PP P P P PP P P P
Sbjct: 436 PPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPP 478
Score = 35.9 bits (79), Expect = 0.008
Identities = 19/61 (31%), Positives = 20/61 (32%)
Frame = +2
Query: 509 PXXXXXXPPXXXXXSXPFPPXXPPXXAXXPXXXPXTPPXPPPPPXXPXXPXXPPXXPPPX 688
P PP + P P P P P PP P P P P P PPP
Sbjct: 421 PSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAP-APPPA 479
Query: 689 P 691
P
Sbjct: 480 P 480
Score = 34.7 bits (76), Expect = 0.019
Identities = 18/59 (30%), Positives = 19/59 (32%), Gaps = 2/59 (3%)
Frame = +2
Query: 509 PXXXXXXPPXXXXXSXPFPPXXP--PXXAXXPXXXPXTPPXPPPPPXXPXXPXXPPXXP 679
P PP + PP P P P P PP PP P P P P P
Sbjct: 429 PSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAP 487
Score = 34.3 bits (75), Expect = 0.025
Identities = 27/99 (27%), Positives = 28/99 (28%), Gaps = 10/99 (10%)
Frame = +2
Query: 425 PPXXPXXXKXPSPXQXXXXXXXXXXXXXPXXXXXXPPXXXXXSXPFPPXXPPXXAXX--P 598
PP P P Q P PP + PP PP P
Sbjct: 342 PPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAP 401
Query: 599 XXXPX-------TPPXPPPPPXXP-XXPXXPPXXPPPXP 691
P TPP P PP P P PP PP P
Sbjct: 402 ALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLP 440
Score = 33.5 bits (73), Expect = 0.044
Identities = 21/58 (36%), Positives = 22/58 (37%), Gaps = 4/58 (6%)
Frame = +2
Query: 530 PPXXXXXSXP--FPPXXPPXXAXXPXXXPXTPPXPPPPPXXPXXPXXPPXXP--PPXP 691
PP S P PP PP + P P PP PP P P P P PP P
Sbjct: 415 PPVPTPPSLPPSAPPSLPP--SAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLP 470
Score = 27.1 bits (57), Expect = 3.8
Identities = 13/42 (30%), Positives = 13/42 (30%)
Frame = +2
Query: 557 PFPPXXPPXXAXXPXXXPXTPPXPPPPPXXPXXPXXPPXXPP 682
P PP P P PP PP PP PP
Sbjct: 231 PIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPP 272
Score = 27.1 bits (57), Expect = 3.8
Identities = 16/54 (29%), Positives = 17/54 (31%), Gaps = 2/54 (3%)
Frame = +2
Query: 530 PPXXXXXSXPFPPXXPPXXAXXPXXXPXTPPXP--PPPPXXPXXPXXPPXXPPP 685
P S P PP PP P +PP P P P PPP
Sbjct: 242 PERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPP 295
Score = 27.1 bits (57), Expect = 3.8
Identities = 14/41 (34%), Positives = 15/41 (36%), Gaps = 5/41 (12%)
Frame = +2
Query: 563 PPXXPPXXAXXPXXXPXTP-----PXPPPPPXXPXXPXXPP 670
PP PP + P P P PPPP P PP
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPP 377
Score = 26.6 bits (56), Expect = 5.1
Identities = 11/30 (36%), Positives = 11/30 (36%)
Frame = +1
Query: 616 PTXPPPPPXXPXXXXXXPXXXPPPPXXPPP 705
P PP P P P P PP P P
Sbjct: 447 PPLPPSAPIAPPLPAGMPAAPPLPPAAPAP 476
Score = 26.2 bits (55), Expect = 6.7
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +3
Query: 783 PPXPPXXXPPPXPXPPXXPXXPP 851
PP P P P PP P PP
Sbjct: 436 PPSLPMGAPAAPPLPPSAPIAPP 458
Score = 24.2 bits (50), Expect(2) = 0.83
Identities = 12/30 (40%), Positives = 12/30 (40%), Gaps = 6/30 (20%)
Frame = +2
Query: 620 PXPPPPPXX------PXXPXXPPXXPPPXP 691
P PPPPP P P PPP P
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPP 366
Score = 23.4 bits (48), Expect(2) = 0.83
Identities = 10/27 (37%), Positives = 10/27 (37%)
Frame = +2
Query: 557 PFPPXXPPXXAXXPXXXPXTPPXPPPP 637
P PP A PP PPPP
Sbjct: 291 PLPPPSSRVSAAALAANKKRPPPPPPP 317
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 35.9 bits (79), Expect = 0.008
Identities = 21/55 (38%), Positives = 21/55 (38%), Gaps = 1/55 (1%)
Frame = -3
Query: 690 GXGGGXXGGXXGXXGXXGG-GGGXGGVXGXXXGXXAXXGGXXGGKGXEXXXXXGG 529
G GG GG G G GG GGG GG G G G GG GG
Sbjct: 9 GGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGG 63
Score = 28.3 bits (60), Expect = 1.7
Identities = 15/33 (45%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Frame = -3
Query: 690 GXGGGXXGGXXGXXGXXGG-GGGXGGVXGXXXG 595
G GG GG G G GG GG GG G G
Sbjct: 38 GGRGGARGGRGGRGGARGGRGGSSGGRGGAKGG 70
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 35.9 bits (79), Expect = 0.008
Identities = 18/52 (34%), Positives = 18/52 (34%)
Frame = +2
Query: 530 PPXXXXXSXPFPPXXPPXXAXXPXXXPXTPPXPPPPPXXPXXPXXPPXXPPP 685
PP P P P P PP PPPPP PP PPP
Sbjct: 733 PPPPPAVIVP-TPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 34.3 bits (75), Expect = 0.025
Identities = 20/53 (37%), Positives = 20/53 (37%), Gaps = 6/53 (11%)
Frame = +2
Query: 551 SXPFPPXXPPXXAXXPXXXPXTPPXP-----PPPPXXPXXPXX-PPXXPPPXP 691
S P PP P P PP P PPPP P PP PPP P
Sbjct: 731 SPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 29.5 bits (63), Expect = 0.72
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = +1
Query: 625 PPPPPXXPXXXXXXPXXXPPPPXXPPP 705
PPPPP P P PPPP PPP
Sbjct: 761 PPPPPPPPGVAGAGPP--PPPP--PPP 783
Score = 27.1 bits (57), Expect = 3.8
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = +3
Query: 783 PPXPPXXXPPPXPXPPXXPXXPPXXXXP 866
PP P PPP P PP P P
Sbjct: 753 PPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 25.8 bits (54), Expect = 8.8
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +3
Query: 783 PPXPPXXXPPPXPXPPXXPXXPP 851
PP PP P P P P PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPP 754
Score = 25.4 bits (53), Expect(2) = 0.36
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = +1
Query: 625 PPPPPXXPXXXXXXPXXXPPPPXXP 699
PPPPP P P PP P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAP 756
Score = 23.4 bits (48), Expect(2) = 0.36
Identities = 9/23 (39%), Positives = 9/23 (39%)
Frame = +1
Query: 784 PPXXXXPXXPXXXXPPXXPXPPP 852
PP P PP P PPP
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPPPP 783
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 25.8 bits (54), Expect(3) = 0.021
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +1
Query: 613 HPTXPPPPP 639
HPT PPPPP
Sbjct: 904 HPTPPPPPP 912
Score = 23.0 bits (47), Expect(3) = 0.021
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1
Query: 679 PPPPXXPPP 705
PPPP PPP
Sbjct: 945 PPPPPPPPP 953
Score = 22.6 bits (46), Expect(3) = 0.021
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +1
Query: 616 PTXPPPPPXXP 648
P PPPPP P
Sbjct: 942 PAFPPPPPPPP 952
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 33.9 bits (74), Expect = 0.033
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = +2
Query: 608 PXTPPXPPPPPXXPXXPXXPPXXPPP 685
P PP PPPPP P PP PPP
Sbjct: 6 PGNPP-PPPPPPGFEPPSQPPPPPPP 30
Score = 33.1 bits (72), Expect = 0.058
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +2
Query: 563 PPXXPPXXAXXPXXXPXTPPXPPPPP 640
PP PP P P + P PPPPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 31.5 bits (68), Expect = 0.18
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +2
Query: 617 PPXPPPPPXXPXXPXXPPXXPPPXP 691
PP PPPP P PP PPP P
Sbjct: 5 PPGNPPPPPPPPG-FEPPSQPPPPP 28
Score = 30.7 bits (66), Expect = 0.31
Identities = 15/30 (50%), Positives = 15/30 (50%)
Frame = +1
Query: 616 PTXPPPPPXXPXXXXXXPXXXPPPPXXPPP 705
P PPPPP P P PPPP PPP
Sbjct: 6 PGNPPPPPPPP---GFEPPSQPPPP--PPP 30
Score = 28.7 bits (61), Expect = 1.3
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +3
Query: 783 PPXPPXXXPPPXPXPPXXPXXPP 851
P PP PPP PP P PP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPP 28
Score = 28.7 bits (61), Expect = 1.3
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +3
Query: 783 PPXPPXXXPPPXPXPPXXP 839
PP PP PP P PP P
Sbjct: 12 PPPPPGFEPPSQPPPPPPP 30
Score = 25.8 bits (54), Expect = 8.8
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = +3
Query: 792 PPXXXPPPXPXPPXXPXXPPXXXXP 866
PP PPP P P P P P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPP 29
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 33.9 bits (74), Expect = 0.033
Identities = 18/55 (32%), Positives = 20/55 (36%), Gaps = 3/55 (5%)
Frame = +2
Query: 530 PPXXXXXSXPFPPXXPPXXAXXPXXXPXTPP--XPPPPPXXP-XXPXXPPXXPPP 685
PP + P P PP + P P PP P P P PP PPP
Sbjct: 150 PPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPP 204
Score = 29.9 bits (64), Expect = 0.54
Identities = 17/48 (35%), Positives = 17/48 (35%), Gaps = 1/48 (2%)
Frame = +2
Query: 551 SXPFPPXXPPXXAXXPXXXPXTPPXPPPPPX-XPXXPXXPPXXPPPXP 691
S P PP P P P P PPP P P P P P P
Sbjct: 126 SAPAPPT-PQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLP 172
Score = 29.5 bits (63), Expect = 0.72
Identities = 16/54 (29%), Positives = 16/54 (29%)
Frame = +2
Query: 530 PPXXXXXSXPFPPXXPPXXAXXPXXXPXTPPXPPPPPXXPXXPXXPPXXPPPXP 691
PP PP P P P P PPP P P P P P
Sbjct: 139 PPTSAPPRPSIPPPSPASAPPIPSKAPPIPS-SLPPPAQPAAPVKSPPSAPSLP 191
Score = 29.1 bits (62), Expect = 0.95
Identities = 21/84 (25%), Positives = 22/84 (26%)
Frame = +1
Query: 616 PTXPPPPPXXPXXXXXXPXXXPPPPXXPPPXXXXXXXXXXXXXXXXXXXXXXXXXXPPXX 795
P+ P PP P P PP P PPP P
Sbjct: 125 PSAPAPPT--PQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVK 182
Query: 796 XXPXXPXXXXPPXXPXPPPXXPXP 867
P P P P PP P P
Sbjct: 183 SPPSAP--SLPSAVPPMPPKVPPP 204
Score = 28.3 bits (60), Expect = 1.7
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +2
Query: 563 PPXXPPXXAXXPXXXPXTPPXPPPPP 640
P PP P P PP PPPP
Sbjct: 180 PVKSPPSAPSLPSAVPPMPPKVPPPP 205
Score = 27.9 bits (59), Expect = 2.2
Identities = 15/45 (33%), Positives = 15/45 (33%), Gaps = 2/45 (4%)
Frame = +2
Query: 563 PPXXPPXXAXXPXXXPXT--PPXPPPPPXXPXXPXXPPXXPPPXP 691
PP P P T PP P PP P P PP P
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIP 168
Score = 26.6 bits (56), Expect = 5.1
Identities = 23/104 (22%), Positives = 24/104 (23%)
Frame = +2
Query: 374 PSXPPPXXXXPXXXXXXPPXXPXXXKXPSPXQXXXXXXXXXXXXXPXXXXXXPPXXXXXS 553
PS P P P P P P P P PP
Sbjct: 125 PSAPAPPT--PQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLP--PPAQPAAP 180
Query: 554 XPFPPXXPPXXAXXPXXXPXTPPXPPPPPXXPXXPXXPPXXPPP 685
PP P + P P PP P P PP
Sbjct: 181 VKSPPSAPSLPSAVPPMPPKVPPPPLSQAPVANTSSRPSSFAPP 224
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 32.7 bits (71), Expect = 0.077
Identities = 15/43 (34%), Positives = 16/43 (37%)
Frame = +2
Query: 563 PPXXPPXXAXXPXXXPXTPPXPPPPPXXPXXPXXPPXXPPPXP 691
PP P A P P + P P P P PP PP P
Sbjct: 1159 PPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVP 1201
Score = 32.3 bits (70), Expect = 0.10
Identities = 29/120 (24%), Positives = 29/120 (24%), Gaps = 2/120 (1%)
Frame = +2
Query: 338 PXXGXXXPLXXGPSXPPPXXXXPXXXXXXPPXXPXXXKXPSPXQXXXXXXXXXXXXXPXX 517
P P PS PP P PP P P P
Sbjct: 1105 PKPSVAVPPVPAPSGAPPV---PKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPV 1161
Query: 518 XXXX--PPXXXXXSXPFPPXXPPXXAXXPXXXPXTPPXPPPPPXXPXXPXXPPXXPPPXP 691
P S PP P P P P P P P P PP PP P
Sbjct: 1162 PKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAP-PVPKPSVGVPPVPPPSTAPPVP 1220
Score = 29.5 bits (63), Expect = 0.72
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = +2
Query: 533 PXXXXXSXPFPPXXPPXXAXXPXXXPXTPPXPPPPPXXPXXPXXPPXXPPPXP 691
P S PP P A P P P P P P P P PP P
Sbjct: 1092 PPVPKPSVAAPPVPKPSVAVPPVPAPSGAP-PVPKPSVAAPPVPVPSGAPPVP 1143
Score = 29.1 bits (62), Expect = 0.95
Identities = 28/115 (24%), Positives = 29/115 (25%), Gaps = 4/115 (3%)
Frame = +2
Query: 359 PLXXGPSXPPPXXXXPXXXXXXPPXXPXXXKXPSPXQXXXXXXXXXXXXXPXXXXXXP-P 535
P+ S PP P PP P P P P P
Sbjct: 1013 PVPKLSSKAPPV---PLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAP 1069
Query: 536 XXXXXSXPFPPXXPPXXAXX---PXXXPXTPPXPPPPPXXPXXPXXPPXXPPPXP 691
S P P PP A P P P P P P P PP P
Sbjct: 1070 SSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVP 1124
Score = 28.7 bits (61), Expect = 1.3
Identities = 15/44 (34%), Positives = 15/44 (34%), Gaps = 1/44 (2%)
Frame = +2
Query: 563 PPXXPPXXAXX-PXXXPXTPPXPPPPPXXPXXPXXPPXXPPPXP 691
PP PP A P PP PPP P P P P
Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVP 1232
Score = 27.1 bits (57), Expect = 3.8
Identities = 12/29 (41%), Positives = 12/29 (41%), Gaps = 1/29 (3%)
Frame = +3
Query: 783 PPXPPXXXPPPXPXPP-XXPXXPPXXXXP 866
PP PP PP P P P PP P
Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVPPPSTAP 1217
Score = 26.6 bits (56), Expect = 5.1
Identities = 13/43 (30%), Positives = 13/43 (30%)
Frame = +2
Query: 563 PPXXPPXXAXXPXXXPXTPPXPPPPPXXPXXPXXPPXXPPPXP 691
PP P P P T P P P P PP P
Sbjct: 1198 PPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVP 1240
Score = 26.2 bits (55), Expect = 6.7
Identities = 23/104 (22%), Positives = 24/104 (23%), Gaps = 2/104 (1%)
Frame = +2
Query: 374 PSXPPPXXXXPXXXXXXPPXXPXXXKXPSPXQXXXXXXXXXXXXXPXXXXXXPPXXXXXS 553
PS P P P P+P P P S
Sbjct: 1145 PSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPS 1204
Query: 554 XPFPPXXPPXXAXXPXXXPXT--PPXPPPPPXXPXXPXXPPXXP 679
PP PP P P PP P P P P P
Sbjct: 1205 VGVPPVPPP-STAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEAP 1247
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 29.5 bits (63), Expect = 0.72
Identities = 26/93 (27%), Positives = 27/93 (29%), Gaps = 6/93 (6%)
Frame = +2
Query: 425 PPXXPXXXKXPSPXQXXXXXXXXXXXXXPXXXXXXPPXXXXXSXPFPPXXP--PXXAXXP 598
PP P + PS Q P P S P PP P P P
Sbjct: 592 PPVAPVVPEAPSVPQPPVAPVAPEVPSVPQRPAV-PVVPEAPSVPQPPAAPVVPEVPSVP 650
Query: 599 XXX--PXTPPXP--PPPPXXPXXPXXPPXXPPP 685
P P P P PP P P P PP
Sbjct: 651 QRPAVPVVPEAPSVPQPPAAPVVPEVPSVPQPP 683
Score = 27.5 bits (58), Expect = 2.9
Identities = 23/92 (25%), Positives = 25/92 (27%), Gaps = 5/92 (5%)
Frame = +2
Query: 425 PPXXPXXXKXPSPXQXXXXXXXXXXXXXPXXXXXX--PPXXXXXSXPFPPXXPPXXAXX- 595
PP P + PS Q P P P P P +
Sbjct: 517 PPAAPVVPEAPSVHQPPAAPVAPEVPSAPQRPAAPVVPEAPSVPQRPAVPVVPEALSVPQ 576
Query: 596 PXXXPXTPPXP--PPPPXXPXXPXXPPXXPPP 685
P P P P P PP P P P PP
Sbjct: 577 PPVAPVAPEVPSVPQPPVAPVVPEAPSVPQPP 608
Score = 26.2 bits (55), Expect = 6.7
Identities = 18/69 (26%), Positives = 19/69 (27%)
Frame = +2
Query: 425 PPXXPXXXKXPSPXQXXXXXXXXXXXXXPXXXXXXPPXXXXXSXPFPPXXPPXXAXXPXX 604
PP P + PS Q P P S P PP P
Sbjct: 637 PPAAPVVPEVPSVPQRPAVPVVPEAPSVPQPPAA-PVVPEVPSVPQPPAVPVVPEAGQLN 695
Query: 605 XPXTPPXPP 631
P PP PP
Sbjct: 696 EPVVPPLPP 704
>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 23.8 bits (49), Expect(2) = 1.4
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +2
Query: 614 TPPXPPPPP 640
+PP PPPPP
Sbjct: 369 SPPPPPPPP 377
Score = 23.0 bits (47), Expect(2) = 1.4
Identities = 9/23 (39%), Positives = 9/23 (39%)
Frame = +2
Query: 617 PPXPPPPPXXPXXPXXPPXXPPP 685
PP PPPP P P P
Sbjct: 371 PPPPPPPELLNHSPKSRPLGDKP 393
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 28.3 bits (60), Expect = 1.7
Identities = 19/82 (23%), Positives = 19/82 (23%), Gaps = 1/82 (1%)
Frame = +3
Query: 609 PPPHXXPPPPXXPXXXXXXPXXXPPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPP 788
PPP PP P PPP P
Sbjct: 167 PPPSFQPPSAAAPATSLPSDYNPPPPPPPPPAVEDQAADANEPDDYYSSGRAVSPEIPPT 226
Query: 789 XPPXXXPP-PXPXPPXXPXXPP 851
P P P P PP P PP
Sbjct: 227 YTPKQADPLPAPPPPPPPTLPP 248
Score = 27.9 bits (59), Expect = 2.2
Identities = 20/82 (24%), Positives = 21/82 (25%)
Frame = +1
Query: 616 PTXPPPPPXXPXXXXXXPXXXPPPPXXPPPXXXXXXXXXXXXXXXXXXXXXXXXXXPPXX 795
P+ PP P PPPP PPP PP
Sbjct: 169 PSFQPPSAAAPATSLPSDYNPPPPP-PPPPAVEDQAADANEPDDYYSSGRAVSPEIPPTY 227
Query: 796 XXPXXPXXXXPPXXPXPPPXXP 861
PP P PPP P
Sbjct: 228 TPKQADPLPAPP--PPPPPTLP 247
Score = 26.6 bits (56), Expect = 5.1
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +2
Query: 557 PFPPXXPPXXAXXPXXXPXTPPXPPPPPXXP 649
P P PP A P PPPPP P
Sbjct: 167 PPPSFQPPSAAAPATSLPSDYNPPPPPPPPP 197
Score = 26.2 bits (55), Expect = 6.7
Identities = 15/45 (33%), Positives = 15/45 (33%)
Frame = +2
Query: 551 SXPFPPXXPPXXAXXPXXXPXTPPXPPPPPXXPXXPXXPPXXPPP 685
S PP P A P P PPPPP P P P
Sbjct: 220 SPEIPPTYTPKQAD-----PLPAPPPPPPPTLPPQSTNTSQLPMP 259
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 27.9 bits (59), Expect = 2.2
Identities = 24/87 (27%), Positives = 24/87 (27%), Gaps = 2/87 (2%)
Frame = -1
Query: 866 GXGXXGGGXGXXGGXXXXGXXGXXXXGGXXXXXXXXXXXXXXXXXXXXXXXGXXGGGXXG 687
G G G G G G G G G G GGG G
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGG 246
Query: 686 GGGXXXGXXXXXXGXXGGGG--GXVGW 612
GG G G GG G G GW
Sbjct: 247 FGGGLGGFGGGPGGFGGGPGGHGGPGW 273
Score = 26.6 bits (56), Expect = 5.1
Identities = 21/81 (25%), Positives = 22/81 (27%)
Frame = -2
Query: 850 GGXXGXXGGXGXGGGWXXGGXGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXGXXXGGGXX 671
G G GG G G G G GG G G G
Sbjct: 184 GHNGGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGG 243
Query: 670 XGXXXXXXGXXGGGGXXWGGG 608
G G GGG +GGG
Sbjct: 244 PGGFGGGLGGFGGGPGGFGGG 264
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 27.9 bits (59), Expect = 2.2
Identities = 14/51 (27%), Positives = 15/51 (29%)
Frame = +2
Query: 533 PXXXXXSXPFPPXXPPXXAXXPXXXPXTPPXPPPPPXXPXXPXXPPXXPPP 685
P S P PP + P P P PPP P PP
Sbjct: 1041 PSPSALSPSVTPQLPPVSSRLPPVSATRPQIPQPPPVSTALPSSSAVSRPP 1091
Score = 25.8 bits (54), Expect = 8.8
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +1
Query: 619 TXPPPPPXXPXXXXXXPXXXPPPP 690
T PPPPP PPPP
Sbjct: 906 TLPPPPPTASMTASAPAIASPPPP 929
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 27.9 bits (59), Expect = 2.2
Identities = 17/53 (32%), Positives = 19/53 (35%), Gaps = 1/53 (1%)
Frame = -3
Query: 684 GGGXXGGXXGXXGXXGGG-GGXGGVXGXXXGXXAXXGGXXGGKGXEXXXXXGG 529
G GG G G GG GG GG G + G G +G GG
Sbjct: 133 GPAGRGGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGG 185
Score = 27.5 bits (58), Expect = 2.9
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = -3
Query: 690 GXGGGXXGGXXGXXGXXGGGGGXGGVXGXXXGXXAXXGGXXG 565
G GG GG G GGG GG G G GG G
Sbjct: 153 GFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRG--GSRGGFRG 192
>SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1372
Score = 25.8 bits (54), Expect = 8.8
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +3
Query: 795 PXXXPPPXPXPPXXPXXP 848
P PPP P PP P P
Sbjct: 802 PFKAPPPAPLPPPAPPLP 819
Score = 24.2 bits (50), Expect(2) = 2.8
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +1
Query: 826 PPXXPXPPPXXPXP 867
PP P PPP P P
Sbjct: 806 PPPAPLPPPAPPLP 819
Score = 21.4 bits (43), Expect(2) = 2.8
Identities = 7/13 (53%), Positives = 7/13 (53%)
Frame = +1
Query: 667 PXXXPPPPXXPPP 705
P PPP PPP
Sbjct: 802 PFKAPPPAPLPPP 814
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 26.6 bits (56), Expect = 5.1
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +2
Query: 596 PXXXPXTPPXPPPPPXXPXXPXXPPXXPPP 685
P P P PP P P PP PPP
Sbjct: 721 PAIKPQVTPAPPTPAPTPAVKHHPP--PPP 748
>SPBC902.04 |||RNA-binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 589
Score = 26.2 bits (55), Expect = 6.7
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +2
Query: 620 PXPPPPPXXPXXPXXPPXXPPP 685
P PP P P P P PPP
Sbjct: 166 PAMPPIPFLPFNPAAQPPFPPP 187
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 26.2 bits (55), Expect = 6.7
Identities = 19/59 (32%), Positives = 19/59 (32%), Gaps = 6/59 (10%)
Frame = +2
Query: 533 PXXXXXSXPFPPXX--PPXXAXXPXXXPXTPPXP----PPPPXXPXXPXXPPXXPPPXP 691
P S P PP PP P P P P PP P PP P P P
Sbjct: 484 PFIPGTSAPLPPTTFAPPGVPLPPI--PGAPGMPNLNMSQPPMVPPGMALPPGMPAPFP 540
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 25.8 bits (54), Expect = 8.8
Identities = 14/46 (30%), Positives = 14/46 (30%), Gaps = 1/46 (2%)
Frame = +2
Query: 557 PFPPXXP-PXXAXXPXXXPXTPPXPPPPPXXPXXPXXPPXXPPPXP 691
P P P P P PP P P P PP P P
Sbjct: 102 PLPREPPLPNEPVPEEPLPGEPPLPDEPVPEEPLPGEPPLPNEPVP 147
>SPBC660.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 143
Score = 25.8 bits (54), Expect = 8.8
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = -3
Query: 636 GGGGXGGVXGXXXGXXAXXGGXXGGKG 556
GGG G + G G GG GG+G
Sbjct: 112 GGGHHGPLHGPHGGFGGRGGGRMGGRG 138
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,805,347
Number of Sequences: 5004
Number of extensions: 29859
Number of successful extensions: 564
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 90
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 298
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 479324640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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