Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP15_F_P24
(985 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 44 4e-05
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 41 3e-04
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 39 0.001
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 38 0.002
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 36 0.007
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 35 0.015
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 35 0.015
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 34 0.027
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 34 0.035
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 33 0.047
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 32 0.14
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 31 0.33
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 31 0.33
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 27 3.1
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 27 3.1
SPBC1778.01c |zuo1|mpp11, SPBC30D10.01|zuotin |Schizosaccharomyc... 26 7.1
SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces... 26 7.1
SPBC1683.12 |||nicotinic acid plasma membrane transporter |Schiz... 26 9.4
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 26 9.4
SPAC2E12.02 |hsf1|hstf, hsf|transcription factor Hsf1|Schizosacc... 26 9.4
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 43.6 bits (98), Expect = 4e-05
Identities = 19/40 (47%), Positives = 20/40 (50%), Gaps = 4/40 (10%)
Frame = +3
Query: 525 PPPPAXXLPXPPPXPXXXXPPRPPXPXXV----PXPPPPP 632
P P +P PPP P PP PP P V P PPPPP
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 43.2 bits (97), Expect = 6e-05
Identities = 19/39 (48%), Positives = 20/39 (51%)
Frame = +3
Query: 513 PPXXPPPPAXXLPXPPPXPXXXXPPRPPXPXXVPXPPPP 629
PP PPPPA +P P P P PP P P PPPP
Sbjct: 732 PP--PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPP 768
Score = 35.9 bits (79), Expect = 0.009
Identities = 23/67 (34%), Positives = 23/67 (34%)
Frame = +3
Query: 432 PPPPXPXXXXPXXXXXXXXXXXXXXXRPPXXPPPPAXXLPXPPPXPXXXXPPRPPXPXXV 611
PPPP P P P PP P P PPP P PP
Sbjct: 732 PPPPPPAVIVPTPAPAPI----------PVPPPAPIMGGPPPPPPPPGVAGAGPP----- 776
Query: 612 PXPPPPP 632
P PPPPP
Sbjct: 777 PPPPPPP 783
Score = 31.5 bits (68), Expect = 0.19
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = +3
Query: 546 LPXPPPXPXXXXPPRPPXPXXVPXPPPPPXXXXP 647
L PPP P P P P +P PPP P P
Sbjct: 729 LKSPPPPPPAVIVPTPA-PAPIPVPPPAPIMGGP 761
Score = 29.5 bits (63), Expect = 0.76
Identities = 17/52 (32%), Positives = 18/52 (34%)
Frame = +2
Query: 722 PDPPPXSPPXXPPARXXPPXXRPXGPXTXXPPRRXPXCXXLPXXPXXPXPPP 877
P PPP + PA P P P PP P P P PPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVP-PPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 29.1 bits (62), Expect = 1.0
Identities = 18/52 (34%), Positives = 18/52 (34%), Gaps = 1/52 (1%)
Frame = +2
Query: 740 SPPXXPPARXXP-PXXRPXGPXTXXPPRRXPXCXXLPXXPXXPXPPPRPPRP 892
SPP PPA P P P P P P PPP PP P
Sbjct: 731 SPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 29.1 bits (62), Expect = 1.0
Identities = 18/54 (33%), Positives = 18/54 (33%), Gaps = 1/54 (1%)
Frame = +2
Query: 728 PPPXSPPXXPPARXXPP-XXRPXGPXTXXPPRRXPXCXXLPXXPXXPXPPPRPP 886
PPP P P P P P PP P P P PPP PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGP--PPPPPPPP 783
Score = 28.7 bits (61), Expect = 1.3
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +1
Query: 775 PXXPPXRPSHPXAXPPXPPXSXPPPP 852
P PP P A PP PP PPPP
Sbjct: 761 PPPPPPPPGVAGAGPPPPP---PPPP 783
Score = 25.8 bits (54), Expect = 9.4
Identities = 14/40 (35%), Positives = 14/40 (35%), Gaps = 3/40 (7%)
Frame = +1
Query: 772 PPXXPPXRPSHPXAXPPXPPXSXP---PPPTXXXPPXAXA 882
P PP P PP PP PPP PP A
Sbjct: 748 PIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSA 787
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 40.7 bits (91), Expect = 3e-04
Identities = 18/41 (43%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Frame = +3
Query: 516 PXXPPPPAXXLPXPPPXPXXXXPP--RPPXPXXVPXPPPPP 632
P PP P PPP P PP PP P P PPPP
Sbjct: 1694 PQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 34.3 bits (75), Expect = 0.027
Identities = 18/44 (40%), Positives = 19/44 (43%), Gaps = 2/44 (4%)
Frame = +1
Query: 772 PPXXPPXR--PSHPXAXPPXPPXSXPPPPTXXXPPXAXAPTSXP 897
PP P P PP PP S PPPP+ PP P S P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPS--APPMPAGPPSAP 1731
Score = 33.1 bits (72), Expect = 0.062
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = +3
Query: 525 PPPPAXXLPXPPPXPXXXXPPRPPXPXXVPXPPPP 629
PPPP +P PP PP P P P PP P
Sbjct: 1707 PPPPPMSVPPPP-----SAPPMPAGPPSAPPPPLP 1736
Score = 30.7 bits (66), Expect = 0.33
Identities = 15/54 (27%), Positives = 18/54 (33%)
Frame = +2
Query: 722 PDPPPXSPPXXPPARXXPPXXRPXGPXTXXPPRRXPXCXXLPXXPXXPXPPPRP 883
P P +PP P + P P P P +P P PPP P
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 30.7 bits (66), Expect = 0.33
Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 4/34 (11%)
Frame = +1
Query: 796 PSHPXAXPPXPPXSXPPP----PTXXXPPXAXAP 885
P+HP + PP P S PP PT PP + P
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPP 1716
Score = 29.5 bits (63), Expect = 0.76
Identities = 15/39 (38%), Positives = 17/39 (43%), Gaps = 6/39 (15%)
Frame = +3
Query: 534 PAXXLPXPPPXPXXXXPPR------PPXPXXVPXPPPPP 632
PA + PP P PP+ PP P VP PP P
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAP 1721
Score = 27.5 bits (58), Expect = 3.1
Identities = 13/42 (30%), Positives = 15/42 (35%)
Frame = +1
Query: 772 PPXXPPXRPSHPXAXPPXPPXSXPPPPTXXXPPXAXAPTSXP 897
P PP RP P PPP + PP A + P
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGP 1727
Score = 27.5 bits (58), Expect = 3.1
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +1
Query: 772 PPXXPPXRPSHPXAXPPXPPXSXPPPPTXXXPPXAXAP 885
PP P PS P P PP + PPP P P
Sbjct: 1710 PPMSVPPPPSAPPM-PAGPPSAPPPPLPASSAPSVPNP 1746
Score = 27.1 bits (57), Expect = 4.1
Identities = 15/51 (29%), Positives = 15/51 (29%)
Frame = +2
Query: 728 PPPXSPPXXPPARXXPPXXRPXGPXTXXPPRRXPXCXXLPXXPXXPXPPPR 880
PP S P PP P P PP P P P P R
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNPGDR 1749
Score = 27.1 bits (57), Expect = 4.1
Identities = 14/37 (37%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
Frame = +3
Query: 513 PPXXPPPPAXXLPXPPPXPXXXXPPRP-PXPXXVPXP 620
PP PPP P P P PP P VP P
Sbjct: 1710 PPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 25.8 bits (54), Expect = 9.4
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = +1
Query: 772 PPXXPPXRPSHPXAXPPXPPXSXPPPPTXXXPPXAXAP 885
P P P P + P PP S PP P PP A P
Sbjct: 1700 PQMSAPTPPPPPMSVP--PPPSAPPMPA--GPPSAPPP 1733
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 38.7 bits (86), Expect = 0.001
Identities = 21/58 (36%), Positives = 22/58 (37%), Gaps = 1/58 (1%)
Frame = +2
Query: 722 PDPPPXSPPXXPPARXXPPXXRPXGPXTXXPPRRXPXCXXLPXXPXXPXPPPRP-PRP 892
P PP +PP P P P P P P LP P P PPP P P P
Sbjct: 429 PSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLP--PAAPAPPPAPAPAP 484
Score = 35.5 bits (78), Expect = 0.012
Identities = 22/69 (31%), Positives = 24/69 (34%), Gaps = 1/69 (1%)
Frame = +2
Query: 722 PDPPPXSPPXXPPARXXPPXXRPXGPXTXXPPRRXPXCXXLP-XXPXXPXPPPRPPRPXX 898
P PP +PP PP+ PP P P P LP P P PP P P
Sbjct: 421 PSLPPSAPPSLPPS--APPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPP 478
Query: 899 XXXXXRXAP 925
AP
Sbjct: 479 APAPAPAAP 487
Score = 35.1 bits (77), Expect = 0.015
Identities = 19/40 (47%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Frame = +1
Query: 775 PXXPPXRPSHPXAXPPXP---PXSXPPPPTXXXPPXAXAP 885
P PP PS P A PP P P + P PP PP A AP
Sbjct: 444 PAAPPLPPSAPIA-PPLPAGMPAAPPLPPAAPAPPPAPAP 482
Score = 34.7 bits (76), Expect = 0.020
Identities = 18/46 (39%), Positives = 19/46 (41%), Gaps = 1/46 (2%)
Frame = +3
Query: 513 PPXXPPPPAXXLPXPPPXPXXXXPPRPPXPXXVPXPPP-PPXXXXP 647
PP PP P PP P P PP P +P PP PP P
Sbjct: 432 PPSAPPSLPMGAPAAPPLPPSA-PIAPPLPAGMPAAPPLPPAAPAP 476
Score = 34.3 bits (75), Expect = 0.027
Identities = 20/73 (27%), Positives = 20/73 (27%), Gaps = 1/73 (1%)
Frame = +3
Query: 432 PPPPXPXXXXPXXXXXXXXXXXXXXXRPPXXPPP-PAXXLPXPPPXPXXXXPPRPPXPXX 608
PPPP P PP PP P P PP PP P
Sbjct: 361 PPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTP 420
Query: 609 VPXPPPPPXXXXP 647
PP P P
Sbjct: 421 PSLPPSAPPSLPP 433
Score = 33.1 bits (72), Expect = 0.062
Identities = 16/41 (39%), Positives = 16/41 (39%), Gaps = 1/41 (2%)
Frame = +3
Query: 513 PPXXPPP-PAXXLPXPPPXPXXXXPPRPPXPXXVPXPPPPP 632
PP PP P P PP P PP P P PP P
Sbjct: 420 PPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLP 460
Score = 32.3 bits (70), Expect = 0.11
Identities = 19/49 (38%), Positives = 20/49 (40%), Gaps = 7/49 (14%)
Frame = +1
Query: 772 PPXXPPXRPSHPXAXPPXPPXSX--PP-----PPTXXXPPXAXAPTSXP 897
PP PP P A PP PP + PP P PP A AP P
Sbjct: 432 PPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAP 480
Score = 31.9 bits (69), Expect = 0.14
Identities = 16/43 (37%), Positives = 17/43 (39%), Gaps = 3/43 (6%)
Frame = +3
Query: 510 RPPXXPPPPAXXLPXPPPXPXXXXP---PRPPXPXXVPXPPPP 629
+PP LP PPP P P PP P PPPP
Sbjct: 324 KPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPP 366
Score = 31.5 bits (68), Expect = 0.19
Identities = 16/40 (40%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = +3
Query: 516 PXXPP-PPAXXLPXPPPXPXXXXPPRPPXPXXVPXPPPPP 632
P PP PP+ + P P PP PP P PPP P
Sbjct: 444 PAAPPLPPSAPIAPPLPAGMPAAPPLPPA---APAPPPAP 480
Score = 31.1 bits (67), Expect = 0.25
Identities = 19/68 (27%), Positives = 20/68 (29%), Gaps = 3/68 (4%)
Frame = +3
Query: 435 PPPXPXXXXPXXXXXXXXXXXXXXXRPPXXPPP---PAXXLPXPPPXPXXXXPPRPPXPX 605
PPP P PP PPP A +P PP PP P
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAP 370
Query: 606 XVPXPPPP 629
PPP
Sbjct: 371 STGRQPPP 378
Score = 31.1 bits (67), Expect = 0.25
Identities = 20/61 (32%), Positives = 23/61 (37%), Gaps = 1/61 (1%)
Frame = +1
Query: 775 PXXPPXRPSHPXAXPPXP-PXSXPPPPTXXXPPXAXAPTSXPXXXXXXXCSXPXXXLXPP 951
P PP + + PP P P S PP PP AP S P P + PP
Sbjct: 401 PALPPLGNASRTSTPPVPTPPSLPPSAPPSLPP--SAPPSLPMGAPAAPPLPPSAPIAPP 458
Query: 952 L 954
L
Sbjct: 459 L 459
Score = 30.7 bits (66), Expect = 0.33
Identities = 22/71 (30%), Positives = 23/71 (32%), Gaps = 4/71 (5%)
Frame = +3
Query: 432 PPPPXPXXXXPXXXXXXXXXXXXXXXRPPXXPPPP----AXXLPXPPPXPXXXXPPRPPX 599
PPPP P PP PPPP A +P PP PP PP
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPP--PPPPRSNAAGSIPLPPQG-RSAPPPPPPR 367
Query: 600 PXXVPXPPPPP 632
PPP
Sbjct: 368 SAPSTGRQPPP 378
Score = 30.3 bits (65), Expect = 0.44
Identities = 22/65 (33%), Positives = 22/65 (33%), Gaps = 9/65 (13%)
Frame = +2
Query: 722 PDPPPX-----SPPXXPPARXXPPXXRPXGPXTXXPPRRXP----XCXXLPXXPXXPXPP 874
P PPP SPP PP P P T PP P L P PP
Sbjct: 255 PIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKRPPPP 314
Query: 875 PRPPR 889
P P R
Sbjct: 315 PPPSR 319
Score = 29.1 bits (62), Expect = 1.0
Identities = 16/42 (38%), Positives = 17/42 (40%)
Frame = +1
Query: 772 PPXXPPXRPSHPXAXPPXPPXSXPPPPTXXXPPXAXAPTSXP 897
PP P PS P + PP P S PP P P S P
Sbjct: 415 PPVPTP--PSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAP 454
Score = 29.1 bits (62), Expect = 1.0
Identities = 20/67 (29%), Positives = 21/67 (31%), Gaps = 2/67 (2%)
Frame = +3
Query: 435 PPPXPXXXXPXXXXXXXXXXXXXXXRPPXXP--PPPAXXLPXPPPXPXXXXPPRPPXPXX 608
PP P P PP P PP +P PP P P PP P
Sbjct: 424 PPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPA--APAPP-PAP 480
Query: 609 VPXPPPP 629
P P P
Sbjct: 481 APAPAAP 487
Score = 28.7 bits (61), Expect = 1.3
Identities = 19/69 (27%), Positives = 21/69 (30%), Gaps = 1/69 (1%)
Frame = +3
Query: 429 HPPPPXPXXXXPXXXXXXXXXXXXXXXRPPXXPPPPAXXLPXPPPXPXXXXPPRP-PXPX 605
+PP P P PP P PP+ PP P P P P
Sbjct: 387 NPPAPPPAIPGRSAPALPPLGNASRTSTPPV-PTPPSLPPSAPPSLPPSAPPSLPMGAPA 445
Query: 606 XVPXPPPPP 632
P PP P
Sbjct: 446 APPLPPSAP 454
Score = 28.3 bits (60), Expect = 1.8
Identities = 16/40 (40%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Frame = +1
Query: 784 PPXRPSHPXAXPP--XPPXSXPPPPTXXXPPXAXAPTSXP 897
PP PS P + PP P S P PP PP + S P
Sbjct: 230 PPIPPSIPSSRPPERVPSLSAPAPP--PIPPPSNGTVSSP 267
Score = 27.5 bits (58), Expect = 3.1
Identities = 19/69 (27%), Positives = 20/69 (28%), Gaps = 2/69 (2%)
Frame = +2
Query: 731 PPXSPPXXPPARXXPPXXRPXGPXTXXPPRRXPXCXXLPXXPXXPXP--PPRPPRPXXXX 904
PP PP R PP + PP P P P P PP P
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAP 370
Query: 905 XXXRXAPXL 931
R P L
Sbjct: 371 STGRQPPPL 379
Score = 27.1 bits (57), Expect = 4.1
Identities = 14/39 (35%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Frame = +1
Query: 784 PPXRPSHPXAXPPXPPXSXPPPPTXXXPPXAXAP-TSXP 897
PP S + PP PP + P PP A TS P
Sbjct: 377 PPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTP 415
Score = 26.6 bits (56), Expect = 5.4
Identities = 19/68 (27%), Positives = 20/68 (29%)
Frame = +2
Query: 728 PPPXSPPXXPPARXXPPXXRPXGPXTXXPPRRXPXCXXLPXXPXXPXPPPRPPRPXXXXX 907
PPP PP A P + PPR P P PP P
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAP-PPAI 395
Query: 908 XXRXAPXL 931
R AP L
Sbjct: 396 PGRSAPAL 403
Score = 26.2 bits (55), Expect = 7.1
Identities = 14/42 (33%), Positives = 15/42 (35%), Gaps = 2/42 (4%)
Frame = +3
Query: 513 PPXXPPPPAXXLPXPPPXPXXXXPP--RPPXPXXVPXPPPPP 632
PP PPP + PP P P P PP PP
Sbjct: 253 PPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPP 294
Score = 25.8 bits (54), Expect = 9.4
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +3
Query: 549 PXPPPXPXXXXPPRPPXPXXVPXPPPPP 632
P PP P P R P P PPP P
Sbjct: 231 PIPPSIPSSRPPERVP-SLSAPAPPPIP 257
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 38.3 bits (85), Expect = 0.002
Identities = 23/51 (45%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = -3
Query: 869 GGXXXVGGGGXDXGGXGGXAXGXEGRXGGXXGGXXXQGGXXGGXGG--GGR 723
GG GG GG G A G G GG GG +GG GG GG GGR
Sbjct: 16 GGRGGFNGGRGGFGGGRGGARG--GGRGGARGGRGGRGGARGGRGGSSGGR 64
Score = 37.9 bits (84), Expect = 0.002
Identities = 22/51 (43%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Frame = -3
Query: 869 GGXXXVGGG--GXDXGGXGGXAXGXEGRXGGXXGGXXXQGGXXGGXGGGGR 723
GG GGG G GG GG A G G GG GG G GG GG +
Sbjct: 23 GGRGGFGGGRGGARGGGRGG-ARGGRGGRGGARGGRGGSSGGRGGAKGGAK 72
Score = 35.1 bits (77), Expect = 0.015
Identities = 21/54 (38%), Positives = 22/54 (40%)
Frame = -3
Query: 881 AXAXGGXXXVGGGGXDXGGXGGXAXGXEGRXGGXXGGXXXQGGXXGGXGGGGRA 720
A G GG GG G G G GG GG +GG GG GG G A
Sbjct: 2 AYTPGSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGG--GRGGARGGRGGRGGA 53
Score = 34.3 bits (75), Expect = 0.027
Identities = 21/59 (35%), Positives = 22/59 (37%)
Frame = -2
Query: 930 RXGAXRXXXXXXXGRGGRGGGXGXXGXXGRXXXXGXRRGGXXVXGPXGRXXGGXXRAGG 754
R G+ GRGG GGG G GR G R G G G GG A G
Sbjct: 11 RGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKG 69
Score = 33.9 bits (74), Expect = 0.035
Identities = 21/47 (44%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Frame = -1
Query: 646 GXXXXGGGGGXGTXXGXGG-RGGXXXWGXGGGXGRXXAGGGGXXGGR 509
G G GG G G GG RGG G GG G G GG GGR
Sbjct: 12 GGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARG-GRGGRGGARGGR 57
Score = 33.5 bits (73), Expect = 0.047
Identities = 19/41 (46%), Positives = 19/41 (46%)
Frame = -1
Query: 631 GGGGGXGTXXGXGGRGGXXXWGXGGGXGRXXAGGGGXXGGR 509
G GG G GGRGG G G GR A GGG G R
Sbjct: 6 GSRGGRG--GSRGGRGGFNGGRGGFGGGRGGARGGGRGGAR 44
Score = 33.5 bits (73), Expect = 0.047
Identities = 16/34 (47%), Positives = 16/34 (47%)
Frame = -1
Query: 628 GGGGXGTXXGXGGRGGXXXWGXGGGXGRXXAGGG 527
GGG G G GGRGG G GR A GG
Sbjct: 37 GGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGG 70
Score = 33.1 bits (72), Expect = 0.062
Identities = 19/40 (47%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = -1
Query: 625 GGGXGTXXGXGGRGGXXXWGXGGGXGRXXAGG-GGXXGGR 509
GG G+ G GG G G GGG G GG GG GGR
Sbjct: 9 GGRGGSRGGRGGFNGGRG-GFGGGRGGARGGGRGGARGGR 47
Score = 32.3 bits (70), Expect = 0.11
Identities = 20/47 (42%), Positives = 20/47 (42%), Gaps = 2/47 (4%)
Frame = -1
Query: 646 GXXXXGGGGGXGTXXGXGG-RGGXXXWGXG-GGXGRXXAGGGGXXGG 512
G GGG G G GG RGG G GG G G GG GG
Sbjct: 24 GRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGG 70
Score = 31.9 bits (69), Expect = 0.14
Identities = 19/42 (45%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = -1
Query: 631 GGGGGXGTXXGX-GGRGGXXXWGXGGGXGRXXAGGGGXXGGR 509
G GG G G GGRGG G GG G G G GGR
Sbjct: 10 GRGGSRGGRGGFNGGRGGFGG-GRGGARGGGRGGARGGRGGR 50
Score = 31.1 bits (67), Expect = 0.25
Identities = 19/40 (47%), Positives = 19/40 (47%)
Frame = -1
Query: 628 GGGGXGTXXGXGGRGGXXXWGXGGGXGRXXAGGGGXXGGR 509
GGG G GGRGG G GG G G GG GGR
Sbjct: 29 GGGRGGAR--GGGRGGAR--GGRGGRGGARGGRGGSSGGR 64
Score = 29.9 bits (64), Expect = 0.58
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = -2
Query: 969 GXGXXQGGRXXXXRXGAXRXXXXXXXGRGGRGGGXGXXG 853
G G +GG R GA RGGRGG G G
Sbjct: 27 GFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRG 65
Score = 29.5 bits (63), Expect = 0.76
Identities = 18/45 (40%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Frame = -2
Query: 888 RGGRGGG-XGXXGXXGRXXXXGXRRGGXXVXGPXGRXXGGXXRAG 757
RGGRGG G G G G RGG G G G R G
Sbjct: 8 RGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGG 52
Score = 27.1 bits (57), Expect = 4.1
Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Frame = -1
Query: 610 TXXGXGGRGG--XXXWGXGGGXGRXXAGGGGXXGG 512
T GGRGG G GG G G GG GG
Sbjct: 4 TPGSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGG 38
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 36.3 bits (80), Expect = 0.007
Identities = 21/51 (41%), Positives = 22/51 (43%)
Frame = -3
Query: 875 AXGGXXXVGGGGXDXGGXGGXAXGXEGRXGGXXGGXXXQGGXXGGXGGGGR 723
A G GG G GG GG G G G GG +GG GG GG R
Sbjct: 130 ARNGPAGRGGRGGFRGGRGGSRGGFGGNSRGGFGGGS-RGGFGGGSRGGSR 179
Score = 34.3 bits (75), Expect = 0.027
Identities = 20/45 (44%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = -3
Query: 851 GGGGXDXGGXGGXAXGX--EGRXGGXXGGXXXQGGXXGGXGGGGR 723
GG G GG GG + G G GG GG +GG GG GG R
Sbjct: 145 GGRGGSRGGFGGNSRGGFGGGSRGGFGGGS--RGGSRGGFRGGSR 187
Score = 31.5 bits (68), Expect = 0.19
Identities = 20/48 (41%), Positives = 20/48 (41%), Gaps = 2/48 (4%)
Frame = -1
Query: 646 GXXXXGGGGGX--GTXXGXGGRGGXXXWGXGGGXGRXXAGGGGXXGGR 509
G GG GG G GG GG G GGG R GGG G R
Sbjct: 133 GPAGRGGRGGFRGGRGGSRGGFGGNSRGGFGGG-SRGGFGGGSRGGSR 179
Score = 31.1 bits (67), Expect = 0.25
Identities = 17/39 (43%), Positives = 17/39 (43%)
Frame = -2
Query: 888 RGGRGGGXGXXGXXGRXXXXGXRRGGXXVXGPXGRXXGG 772
RGGRGG G G R G RGG G G GG
Sbjct: 144 RGGRGGSRGGFGGNSRGGFGGGSRGGFG-GGSRGGSRGG 181
Score = 29.1 bits (62), Expect = 1.0
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = -1
Query: 646 GXXXXGGGGGXGTXXGXGGRGGXXXWGXGGGXGRXXAGGGGXXGGR 509
G G GG G G RGG GG G G G GR
Sbjct: 148 GGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGGSRGGFRGR 193
Score = 28.3 bits (60), Expect = 1.8
Identities = 18/40 (45%), Positives = 18/40 (45%)
Frame = -2
Query: 891 GRGGRGGGXGXXGXXGRXXXXGXRRGGXXVXGPXGRXXGG 772
GRGGRGG G G R G RGG G G GG
Sbjct: 136 GRGGRGGFRGGRG-GSRGGFGGNSRGGFG-GGSRGGFGGG 173
Score = 27.9 bits (59), Expect = 2.3
Identities = 20/50 (40%), Positives = 21/50 (42%), Gaps = 5/50 (10%)
Frame = -1
Query: 646 GXXXXGG--GGGXGTXXGXGG--RGGXXXWGXGG-GXGRXXAGGGGXXGG 512
G GG GG G+ G GG RGG GG G G GG GG
Sbjct: 136 GRGGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGG 185
Score = 26.6 bits (56), Expect = 5.4
Identities = 15/37 (40%), Positives = 16/37 (43%), Gaps = 3/37 (8%)
Frame = -1
Query: 613 GTXXGXGGRGGXXXWGXGGGXGRXXAGG---GGXXGG 512
G G GRGG + G G R GG GG GG
Sbjct: 129 GARNGPAGRGGRGGFRGGRGGSRGGFGGNSRGGFGGG 165
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 35.1 bits (77), Expect = 0.015
Identities = 18/40 (45%), Positives = 18/40 (45%)
Frame = -1
Query: 631 GGGGGXGTXXGXGGRGGXXXWGXGGGXGRXXAGGGGXXGG 512
G GGG G G G G G GGG G G GG GG
Sbjct: 225 GFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGG 264
Score = 33.5 bits (73), Expect = 0.047
Identities = 20/45 (44%), Positives = 21/45 (46%)
Frame = -1
Query: 646 GXXXXGGGGGXGTXXGXGGRGGXXXWGXGGGXGRXXAGGGGXXGG 512
G GGG G G G GG GG +G GG G G GG GG
Sbjct: 189 GFGGFGGGSG-GPPPGPGGFGG---FGGFGGEGHHHGGHGGFGGG 229
Score = 29.9 bits (64), Expect = 0.58
Identities = 23/70 (32%), Positives = 23/70 (32%), Gaps = 2/70 (2%)
Frame = -1
Query: 631 GGGGGXGTXXGXGGRGGXXXWGXGGGXGRXXAGGGGXXG--GRXXXXXXXXXXXXXXXGX 458
G GG G GG G G GGG G G GG G G G
Sbjct: 209 GFGGFGGEGHHHGGHG-----GFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGG 263
Query: 457 XXXGXGGGGW 428
G GG GW
Sbjct: 264 GPGGHGGPGW 273
Score = 29.1 bits (62), Expect = 1.0
Identities = 18/46 (39%), Positives = 18/46 (39%), Gaps = 1/46 (2%)
Frame = -1
Query: 646 GXXXXGGGGGXGTXXGXGGRGGXXXWG-XGGGXGRXXAGGGGXXGG 512
G G GG G GG GG G GG G G GG GG
Sbjct: 191 GGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGG 236
Score = 28.3 bits (60), Expect = 1.8
Identities = 19/47 (40%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Frame = -3
Query: 869 GGXXXVGGG-GXDXGGXGGXAXGXEGRXGGXXGGXXXQGGXXGGXGG 732
GG GGG G G GG G G GG GG GG GG
Sbjct: 188 GGFGGFGGGSGGPPPGPGGF--GGFGGFGGEGHHHGGHGGFGGGPGG 232
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 35.1 bits (77), Expect = 0.015
Identities = 16/32 (50%), Positives = 16/32 (50%)
Frame = +1
Query: 772 PPXXPPXRPSHPXAXPPXPPXSXPPPPTXXXP 867
P PP PS P A PP PP PPPP P
Sbjct: 180 PVKSPPSAPSLPSAVPPMPPK-VPPPPLSQAP 210
Score = 31.5 bits (68), Expect = 0.19
Identities = 18/44 (40%), Positives = 18/44 (40%), Gaps = 3/44 (6%)
Frame = +3
Query: 510 RPPXXPPPPAXXLPXP---PPXPXXXXPPRPPXPXXVPXPPPPP 632
RP PP PA P P PP P PP P V PP P
Sbjct: 146 RPSIPPPSPASAPPIPSKAPPIPSSLPPPAQP-AAPVKSPPSAP 188
Score = 30.7 bits (66), Expect = 0.33
Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = +1
Query: 772 PPXXPPXRPSHPXAXPPXPPXSXPPPPTXXXP-PXAXAPTSXP 897
PP P RPS PP P S PP P+ P P + P + P
Sbjct: 139 PPTSAPPRPS----IPPPSPASAPPIPSKAPPIPSSLPPPAQP 177
Score = 30.3 bits (65), Expect = 0.44
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +3
Query: 513 PPXXPPPPAXXLPXPPPXPXXXXPPRPPXPXXVPXPPPP 629
PP P PP P P PPRP P P PP
Sbjct: 124 PPSAPAPPT---PQSELRPPTSAPPRPSIPPPSPASAPP 159
Score = 30.3 bits (65), Expect = 0.44
Identities = 15/41 (36%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Frame = +3
Query: 510 RPPXXPPPPAXXLPXPPPXPXXXXPPR-PPXPXXVPXPPPP 629
RPP PP +P P P P + PP P +P P P
Sbjct: 138 RPPTSAPP-RPSIPPPSPASAPPIPSKAPPIPSSLPPPAQP 177
Score = 30.3 bits (65), Expect = 0.44
Identities = 20/60 (33%), Positives = 23/60 (38%), Gaps = 3/60 (5%)
Frame = +2
Query: 722 PDPPPXSPPXXP--PARXXP-PXXRPXGPXTXXPPRRXPXCXXLPXXPXXPXPPPRPPRP 892
P PP SP P P++ P P P P + P LP P PP PP P
Sbjct: 147 PSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLP-SAVPPMPPKVPPPP 205
Score = 30.3 bits (65), Expect = 0.44
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 4/40 (10%)
Frame = +1
Query: 784 PPXRPSHPXAXPPXPPX---SXPP-PPTXXXPPXAXAPTS 891
PP +P+ P PP P + PP PP PP + AP +
Sbjct: 173 PPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQAPVA 212
Score = 29.9 bits (64), Expect = 0.58
Identities = 24/83 (28%), Positives = 28/83 (33%), Gaps = 3/83 (3%)
Frame = +2
Query: 731 PPXSP-PXXPPARXXPPXXRPXGPXTXXPPRRXPXCXXLP-XXPXXPXPPPRPPRPXXXX 904
PP +P P P + PP P P PP +P P P P P +P
Sbjct: 124 PPSAPAPPTPQSELRPPTSAP--PRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPV 181
Query: 905 XXXRXAPXLXXXXRP-PWXXPXP 970
AP L P P P P
Sbjct: 182 KSPPSAPSLPSAVPPMPPKVPPP 204
Score = 29.5 bits (63), Expect = 0.76
Identities = 16/39 (41%), Positives = 17/39 (43%), Gaps = 2/39 (5%)
Frame = +3
Query: 513 PPXXPPP--PAXXLPXPPPXPXXXXPPRPPXPXXVPXPP 623
P PPP PA + PP P PP P VP PP
Sbjct: 168 PSSLPPPAQPAAPVKSPPSAPSLPSAV-PPMPPKVPPPP 205
Score = 29.1 bits (62), Expect = 1.0
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = +3
Query: 525 PPPPAXXLPXPPPXPXXXXPPRPPXPXXVPXPPPPP 632
PP A P PP PP P +P PPP
Sbjct: 139 PPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPP 174
Score = 28.7 bits (61), Expect = 1.3
Identities = 18/50 (36%), Positives = 18/50 (36%), Gaps = 6/50 (12%)
Frame = +3
Query: 516 PXXPPPPAXXLPXP--PPXPXXXXPPRPPXPXXVPX----PPPPPXXXXP 647
P PP LP P P P P P P VP PPPP P
Sbjct: 161 PSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQAP 210
Score = 28.7 bits (61), Expect = 1.3
Identities = 18/44 (40%), Positives = 19/44 (43%), Gaps = 4/44 (9%)
Frame = +3
Query: 513 PPXXPPPPAXXLPXP--PPXPXXXXPPRPPXPXXVPXPPP--PP 632
P PP P+ LP P P P P P P VP PP PP
Sbjct: 161 PSKAPPIPS-SLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPP 203
Score = 28.3 bits (60), Expect = 1.8
Identities = 14/35 (40%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Frame = +1
Query: 784 PPXRPSHPXAXPPX-PPXSXPPPPTXXXPPXAXAP 885
PP P+ P PP S PP P+ P A AP
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAP 158
Score = 28.3 bits (60), Expect = 1.8
Identities = 17/56 (30%), Positives = 21/56 (37%), Gaps = 2/56 (3%)
Frame = +2
Query: 728 PPPXSPPXXPPARXXPPXXRPXGPXTXXPPRR-XPXCXXLPXXPXXPXP-PPRPPR 889
P P PP P + P P P + PP + P P P PP PP+
Sbjct: 145 PRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPK 200
Score = 28.3 bits (60), Expect = 1.8
Identities = 16/42 (38%), Positives = 17/42 (40%)
Frame = +1
Query: 772 PPXXPPXRPSHPXAXPPXPPXSXPPPPTXXXPPXAXAPTSXP 897
PP P P P PP P S PPP P +P S P
Sbjct: 150 PPPSPASAPPIPSKAPPIPS-SLPPPAQPAAP--VKSPPSAP 188
Score = 27.5 bits (58), Expect = 3.1
Identities = 17/58 (29%), Positives = 19/58 (32%), Gaps = 1/58 (1%)
Frame = +2
Query: 722 PDPPPXSPPXXPPA-RXXPPXXRPXGPXTXXPPRRXPXCXXLPXXPXXPXPPPRPPRP 892
P P P PP PP +P P PP +P P PPP P
Sbjct: 154 PASAPPIPSKAPPIPSSLPPPAQPAAP-VKSPPSAPSLPSAVPPMPPKVPPPPLSQAP 210
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 34.3 bits (75), Expect = 0.027
Identities = 20/40 (50%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = -1
Query: 628 GGGGXGTXXGXGGRGG-XXXWGXGGGXGRXXAGGGGXXGG 512
GGG G G GGRGG G GGG GR G GG G
Sbjct: 446 GGGSRGGRGGFGGRGGFGGRGGFGGGRGR---GRGGARSG 482
Score = 29.9 bits (64), Expect = 0.58
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = -1
Query: 601 GXGGRGGXXXWGXGGGXGRXXAGGGGXXGGR 509
G G RGG +G GG G GGG GR
Sbjct: 446 GGGSRGGRGGFGGRGGFGGRGGFGGGRGRGR 476
Score = 28.3 bits (60), Expect = 1.8
Identities = 18/57 (31%), Positives = 18/57 (31%)
Frame = -2
Query: 963 GXXQGGRXXXXRXGAXRXXXXXXXGRGGRGGGXGXXGXXGRXXXXGXRRGGXXVXGP 793
G GR R GRGG GG G G G G RGG P
Sbjct: 428 GHFIAGRPCRLDFSTPRTGGGSRGGRGGFGGRGGFGGRGGFGGGRGRGRGGARSGNP 484
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 33.9 bits (74), Expect = 0.035
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = +3
Query: 513 PPXXPPPPAXXLPXPPPXPXXXXPPRPPXPXXVPXP 620
PP P A LP PPP P PP+ +P P
Sbjct: 224 PPTYTPKQADPLPAPPPPPPPTLPPQSTNTSQLPMP 259
Score = 30.3 bits (65), Expect = 0.44
Identities = 17/55 (30%), Positives = 18/55 (32%)
Frame = +2
Query: 722 PDPPPXSPPXXPPARXXPPXXRPXGPXTXXPPRRXPXCXXLPXXPXXPXPPPRPP 886
P PPP PP PP P +P P P PPRPP
Sbjct: 236 PAPPPPPPPTLPPQSTNTSQL----PMPSRNVNNLGSQVNIPPPPATPSQPPRPP 286
Score = 27.1 bits (57), Expect = 4.1
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +1
Query: 772 PPXXPPXRPSHPXAXPPXPPXSXPPPPT 855
PP P + A PP PP + PP T
Sbjct: 224 PPTYTPKQADPLPAPPPPPPPTLPPQST 251
Score = 26.2 bits (55), Expect = 7.1
Identities = 11/30 (36%), Positives = 12/30 (40%)
Frame = +2
Query: 797 PXTXXPPRRXPXCXXLPXXPXXPXPPPRPP 886
P + PP LP P PPP PP
Sbjct: 168 PPSFQPPSAAAPATSLPSDYNPPPPPPPPP 197
Score = 25.0 bits (52), Expect(2) = 0.29
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +3
Query: 585 PRPPXPXXVPXPPPPP 632
P+ P P PPPPP
Sbjct: 229 PKQADPLPAPPPPPPP 244
Score = 24.2 bits (50), Expect(2) = 0.29
Identities = 11/30 (36%), Positives = 11/30 (36%)
Frame = +3
Query: 513 PPXXPPPPAXXLPXPPPXPXXXXPPRPPXP 602
PP PP A P PP PP P
Sbjct: 168 PPSFQPPSAAAPATSLPSDYNPPPPPPPPP 197
Score = 23.4 bits (48), Expect(2) = 1.8
Identities = 11/33 (33%), Positives = 12/33 (36%)
Frame = +3
Query: 513 PPXXPPPPAXXLPXPPPXPXXXXPPRPPXPXXV 611
PP PP+ P PP PP P V
Sbjct: 167 PPPSFQPPSAAAPATSLPSDYNPPPPPPPPPAV 199
Score = 23.0 bits (47), Expect(2) = 1.8
Identities = 8/19 (42%), Positives = 9/19 (47%)
Frame = +3
Query: 591 PPXPXXVPXPPPPPXXXXP 647
P +P PPPPP P
Sbjct: 229 PKQADPLPAPPPPPPPTLP 247
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 33.5 bits (73), Expect = 0.047
Identities = 18/46 (39%), Positives = 19/46 (41%), Gaps = 1/46 (2%)
Frame = +3
Query: 513 PPXXPPPPAXXLPXPP-PXPXXXXPPRPPXPXXVPXPPPPPXXXXP 647
P PP P + PP P P PP P VP P PPP P
Sbjct: 1155 PSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVP-PVPPPSEAPP 1199
Score = 33.5 bits (73), Expect = 0.047
Identities = 18/59 (30%), Positives = 21/59 (35%), Gaps = 2/59 (3%)
Frame = +2
Query: 722 PDPPPXSPPXXPPARXXPPXXRPXGPXTXXPPRRXPXCXXLPXXPXXPXPPP--RPPRP 892
P P +PP P+ PP +P PP P P PPP PP P
Sbjct: 1162 PKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVP 1220
Score = 31.5 bits (68), Expect = 0.19
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +3
Query: 525 PPPPAXXLPXPPPXPXXXXPPRPPXPXXVPXPPPP 629
PP P PP P PP P VP PPP
Sbjct: 1179 PPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPP 1213
Score = 30.7 bits (66), Expect = 0.33
Identities = 18/72 (25%), Positives = 19/72 (26%)
Frame = +3
Query: 432 PPPPXPXXXXPXXXXXXXXXXXXXXXRPPXXPPPPAXXLPXPPPXPXXXXPPRPPXPXXV 611
PP P P P P PPP P P P P P +
Sbjct: 1032 PPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGI 1091
Query: 612 PXPPPPPXXXXP 647
P P P P
Sbjct: 1092 PPVPKPSVAAPP 1103
Score = 30.3 bits (65), Expect = 0.44
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +3
Query: 513 PPXXPPPPAXXLPXPPPXPXXXXPPRPPXPXXVPXPPPP 629
P PP PA P P P PP P VP P P
Sbjct: 1079 PSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAP 1117
Score = 30.3 bits (65), Expect = 0.44
Identities = 19/72 (26%), Positives = 21/72 (29%)
Frame = +3
Query: 432 PPPPXPXXXXPXXXXXXXXXXXXXXXRPPXXPPPPAXXLPXPPPXPXXXXPPRPPXPXXV 611
PP P P P P PP P + PP P PP P +
Sbjct: 1169 PPVPAPSSGIPPVPKPAAGVPPVPP--PSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGL 1226
Query: 612 PXPPPPPXXXXP 647
P P P P
Sbjct: 1227 PPVPVPTAKAPP 1238
Score = 29.9 bits (64), Expect = 0.58
Identities = 14/41 (34%), Positives = 15/41 (36%)
Frame = +3
Query: 525 PPPPAXXLPXPPPXPXXXXPPRPPXPXXVPXPPPPPXXXXP 647
PP PA P P P PP P +P P P P
Sbjct: 1150 PPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPP 1190
Score = 29.1 bits (62), Expect = 1.0
Identities = 16/46 (34%), Positives = 17/46 (36%), Gaps = 1/46 (2%)
Frame = +3
Query: 513 PPXXPPPPAXXLPXPP-PXPXXXXPPRPPXPXXVPXPPPPPXXXXP 647
P PP P + PP P P PP P P P P P P
Sbjct: 1088 PSGIPPVPKPSVAAPPVPKPSVAVPP-VPAPSGAPPVPKPSVAAPP 1132
Score = 29.1 bits (62), Expect = 1.0
Identities = 16/49 (32%), Positives = 17/49 (34%), Gaps = 4/49 (8%)
Frame = +3
Query: 513 PPXXPPPPAXXLPXP----PPXPXXXXPPRPPXPXXVPXPPPPPXXXXP 647
PP P A +P P PP P P P P P P P P
Sbjct: 1112 PPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPP 1160
Score = 28.7 bits (61), Expect = 1.3
Identities = 16/49 (32%), Positives = 17/49 (34%), Gaps = 4/49 (8%)
Frame = +3
Query: 513 PPXXPPPPAXXLPXP----PPXPXXXXPPRPPXPXXVPXPPPPPXXXXP 647
PP P A +P P PP P P P P P P P P
Sbjct: 1131 PPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIP 1179
Score = 28.3 bits (60), Expect = 1.8
Identities = 18/59 (30%), Positives = 20/59 (33%), Gaps = 2/59 (3%)
Frame = +2
Query: 722 PDPPPXSPPXXPPARXXPPXXRPXG-PXTXXPPRRXPXCXXLPXXPXXPXPP-PRPPRP 892
P P +PP P+ PP P G P P P P P P PP P
Sbjct: 1095 PKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVP 1153
Score = 27.9 bits (59), Expect = 2.3
Identities = 20/78 (25%), Positives = 20/78 (25%), Gaps = 6/78 (7%)
Frame = +3
Query: 432 PPPPXPXXXXPXXXXXXXXXXXXXXXRPPXXPPPPAXXLPXP------PPXPXXXXPPRP 593
PP P P P P P P P P PP P P
Sbjct: 1064 PPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPV 1123
Query: 594 PXPXXVPXPPPPPXXXXP 647
P P P P P P
Sbjct: 1124 PKPSVAAPPVPVPSGAPP 1141
Score = 27.1 bits (57), Expect = 4.1
Identities = 17/58 (29%), Positives = 19/58 (32%), Gaps = 6/58 (10%)
Frame = +2
Query: 731 PPXSPPXXPPARXXPPXXRPXG------PXTXXPPRRXPXCXXLPXXPXXPXPPPRPP 886
P +PP P+ PP P G P PP P P PP PP
Sbjct: 1136 PSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPP 1193
Score = 27.1 bits (57), Expect = 4.1
Identities = 13/45 (28%), Positives = 14/45 (31%)
Frame = +3
Query: 513 PPXXPPPPAXXLPXPPPXPXXXXPPRPPXPXXVPXPPPPPXXXXP 647
P PP P + PP PP P P P P P
Sbjct: 1136 PSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPP 1180
Score = 27.1 bits (57), Expect = 4.1
Identities = 18/59 (30%), Positives = 21/59 (35%), Gaps = 2/59 (3%)
Frame = +2
Query: 722 PDPPPX-SPPXXPPARXXPPXXRP-XGPXTXXPPRRXPXCXXLPXXPXXPXPPPRPPRP 892
P PPP +PP P+ PP P P P P +P P P P P
Sbjct: 1190 PVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPP-VPVPTAKAPPVPAPSSEAP 1247
Score = 26.6 bits (56), Expect = 5.4
Identities = 14/54 (25%), Positives = 17/54 (31%)
Frame = +2
Query: 722 PDPPPXSPPXXPPARXXPPXXRPXGPXTXXPPRRXPXCXXLPXXPXXPXPPPRP 883
P P P + P P PP + PP +P P PP P
Sbjct: 1033 PIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVP 1086
Score = 26.6 bits (56), Expect = 5.4
Identities = 12/35 (34%), Positives = 12/35 (34%)
Frame = +3
Query: 525 PPPPAXXLPXPPPXPXXXXPPRPPXPXXVPXPPPP 629
PP P P P P PP P P P P
Sbjct: 1208 PPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAP 1242
Score = 26.2 bits (55), Expect = 7.1
Identities = 16/57 (28%), Positives = 17/57 (29%)
Frame = +2
Query: 722 PDPPPXSPPXXPPARXXPPXXRPXGPXTXXPPRRXPXCXXLPXXPXXPXPPPRPPRP 892
P P PP PP PP +P PP P P P P P
Sbjct: 1182 PKPAAGVPPVPPP-SEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAP 1237
Score = 25.8 bits (54), Expect = 9.4
Identities = 14/39 (35%), Positives = 14/39 (35%), Gaps = 1/39 (2%)
Frame = +1
Query: 784 PPXRPSHPXAXP-PXPPXSXPPPPTXXXPPXAXAPTSXP 897
PP A P P P PP P P PTS P
Sbjct: 1012 PPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTP 1050
Score = 25.8 bits (54), Expect = 9.4
Identities = 16/55 (29%), Positives = 17/55 (30%)
Frame = +2
Query: 728 PPPXSPPXXPPARXXPPXXRPXGPXTXXPPRRXPXCXXLPXXPXXPXPPPRPPRP 892
PP P PP P P + PP P LP P P P P
Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSA-GLPPVPVPTAKAPPVPAP 1242
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 31.9 bits (69), Expect = 0.14
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = +3
Query: 513 PPXXPPPPAXXLPXPPPXPXXXXPPRPPXPXXV 611
PP PPPP P PP PP PP P V
Sbjct: 5 PPGNPPPP----PPPPGFEPPSQPPPPPPPGYV 33
Score = 31.1 bits (67), Expect = 0.25
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +1
Query: 772 PPXXPPXRPSHPXAXPPXPPXSXPPP 849
PP PP P P PP P PPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 28.7 bits (61), Expect = 1.3
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 784 PPXRPSHPXAXPPXPPXSXPPPP 852
PP P P P P S PPPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPP 27
Score = 26.6 bits (56), Expect = 5.4
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +2
Query: 722 PDPPPXSPPXXPPARXXPP 778
P PPP P PP++ PP
Sbjct: 9 PPPPPPPPGFEPPSQPPPP 27
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 30.7 bits (66), Expect = 0.33
Identities = 20/76 (26%), Positives = 21/76 (27%), Gaps = 2/76 (2%)
Frame = +3
Query: 426 HHPPPPXPXXXXPXXXXXXXXXXXXXXXRPPXXPPPPAXXLPXPP--PXPXXXXPPRPPX 599
H PPPP PP P +P PP P PP P
Sbjct: 206 HMPPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMH 265
Query: 600 PXXVPXPPPPPXXXXP 647
PPPP P
Sbjct: 266 HEPGEHMPPPPMHHEP 281
Score = 30.7 bits (66), Expect = 0.33
Identities = 20/76 (26%), Positives = 21/76 (27%), Gaps = 2/76 (2%)
Frame = +3
Query: 426 HHPPPPXPXXXXPXXXXXXXXXXXXXXXRPPXXPPPPAXXLPXPP--PXPXXXXPPRPPX 599
H PPPP PP P +P PP P PP P
Sbjct: 219 HMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMH 278
Query: 600 PXXVPXPPPPPXXXXP 647
PPPP P
Sbjct: 279 HEPGEHMPPPPMHHEP 294
Score = 30.7 bits (66), Expect = 0.33
Identities = 20/76 (26%), Positives = 21/76 (27%), Gaps = 2/76 (2%)
Frame = +3
Query: 426 HHPPPPXPXXXXPXXXXXXXXXXXXXXXRPPXXPPPPAXXLPXPP--PXPXXXXPPRPPX 599
H PPPP PP P +P PP P PP P
Sbjct: 232 HMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMH 291
Query: 600 PXXVPXPPPPPXXXXP 647
PPPP P
Sbjct: 292 HEPGEHMPPPPMHHEP 307
Score = 30.7 bits (66), Expect = 0.33
Identities = 20/76 (26%), Positives = 21/76 (27%), Gaps = 2/76 (2%)
Frame = +3
Query: 426 HHPPPPXPXXXXPXXXXXXXXXXXXXXXRPPXXPPPPAXXLPXPP--PXPXXXXPPRPPX 599
H PPPP PP P +P PP P PP P
Sbjct: 245 HMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMH 304
Query: 600 PXXVPXPPPPPXXXXP 647
PPPP P
Sbjct: 305 HEPGEHMPPPPMHHEP 320
Score = 30.7 bits (66), Expect = 0.33
Identities = 20/76 (26%), Positives = 21/76 (27%), Gaps = 2/76 (2%)
Frame = +3
Query: 426 HHPPPPXPXXXXPXXXXXXXXXXXXXXXRPPXXPPPPAXXLPXPP--PXPXXXXPPRPPX 599
H PPPP PP P +P PP P PP P
Sbjct: 258 HMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMH 317
Query: 600 PXXVPXPPPPPXXXXP 647
PPPP P
Sbjct: 318 HEPGEHMPPPPMHHEP 333
Score = 29.5 bits (63), Expect = 0.76
Identities = 19/71 (26%), Positives = 20/71 (28%), Gaps = 2/71 (2%)
Frame = +3
Query: 426 HHPPPPXPXXXXPXXXXXXXXXXXXXXXRPPXXPPPPAXXLPXPP--PXPXXXXPPRPPX 599
H PPPP PP P +P PP P PP P
Sbjct: 271 HMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMH 330
Query: 600 PXXVPXPPPPP 632
PPPP
Sbjct: 331 HEPGEHMPPPP 341
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 30.7 bits (66), Expect = 0.33
Identities = 15/46 (32%), Positives = 16/46 (34%)
Frame = +3
Query: 510 RPPXXPPPPAXXLPXPPPXPXXXXPPRPPXPXXVPXPPPPPXXXXP 647
RP P A +P PP P P P P P P P P
Sbjct: 562 RPAVPVVPEALSVPQPPVAPVAPEVPSVPQPPVAPVVPEAPSVPQP 607
Score = 29.5 bits (63), Expect = 0.76
Identities = 14/42 (33%), Positives = 16/42 (38%), Gaps = 1/42 (2%)
Frame = +3
Query: 510 RPPXXP-PPPAXXLPXPPPXPXXXXPPRPPXPXXVPXPPPPP 632
+PP P P +P PP P P P P P P P
Sbjct: 576 QPPVAPVAPEVPSVPQPPVAPVVPEAPSVPQPPVAPVAPEVP 617
Score = 29.5 bits (63), Expect = 0.76
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +3
Query: 513 PPXXPPPPAXXLPXPPPXPXXXXPPRPPXPXXVPXPPPPP 632
P PP A +P P P P P VP PP P
Sbjct: 632 PSVPQPPAAPVVPEVPSVPQRPAVPVVPEAPSVPQPPAAP 671
Score = 29.5 bits (63), Expect = 0.76
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +3
Query: 510 RPPXXPPPPAXXLPXPPPXPXXXXPPRPPXPXXVPXPP 623
RP P A +P PP P P P P VP P
Sbjct: 652 RPAVPVVPEAPSVPQPPAAPVVPEVPSVPQPPAVPVVP 689
Score = 29.1 bits (62), Expect = 1.0
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = +3
Query: 516 PXXPPPPAXXLPXPPPXPXXXXPPRPPXPXXVPXPPPPP 632
P P PA +P P P PP P VP P PP
Sbjct: 647 PSVPQRPA--VPVVPEAPSVPQPPAAPVVPEVPSVPQPP 683
Score = 28.3 bits (60), Expect = 1.8
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +3
Query: 513 PPXXPPPPAXXLPXPPPXPXXXXPPRPPXPXXVPXPPPPP 632
P PP A P P P P P VP PP P
Sbjct: 602 PSVPQPPVAPVAPEVPSVPQRPAVPVVPEAPSVPQPPAAP 641
Score = 26.2 bits (55), Expect = 7.1
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +3
Query: 525 PPPPAXXLPXPPPXPXXXXPPRPPXPXXVPXPPPPP 632
P PP P P P PP P P P PP
Sbjct: 575 PQPPVA--PVAPEVPSVPQPPVAPVVPEAPSVPQPP 608
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 27.5 bits (58), Expect = 3.1
Identities = 17/48 (35%), Positives = 18/48 (37%), Gaps = 2/48 (4%)
Frame = +3
Query: 510 RPPXXP--PPPAXXLPXPPPXPXXXXPPRPPXPXXVPXPPPPPXXXXP 647
R P P P P LP PP P P P +P PP P P
Sbjct: 105 REPPLPNEPVPEEPLPGEPPLPDEPVPEEP-----LPGEPPLPNEPVP 147
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 27.5 bits (58), Expect = 3.1
Identities = 14/41 (34%), Positives = 15/41 (36%)
Frame = +3
Query: 510 RPPXXPPPPAXXLPXPPPXPXXXXPPRPPXPXXVPXPPPPP 632
+P P PP P P P PP P P PP P
Sbjct: 724 KPQVTPAPPT---PAPTPAVKHHPPPPPVRSSISPSMPPAP 761
>SPBC1778.01c |zuo1|mpp11, SPBC30D10.01|zuotin |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 442
Score = 26.2 bits (55), Expect = 7.1
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +1
Query: 196 EPRWKLFKKIEKVGRNVRDGLIKAGPAIAANAKQ 297
+PR KLFK+ EK + R +AG AA A Q
Sbjct: 282 DPRIKLFKEQEKAAKAARKWEREAGAREAAAAAQ 315
>SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 26.2 bits (55), Expect = 7.1
Identities = 12/36 (33%), Positives = 12/36 (33%)
Frame = +3
Query: 525 PPPPAXXLPXPPPXPXXXXPPRPPXPXXVPXPPPPP 632
PPPP P P VP PPP P
Sbjct: 366 PPPPVMPQPAAAAVTTPVAAPVAAAAAAVPVPPPAP 401
Score = 25.8 bits (54), Expect = 9.4
Identities = 12/40 (30%), Positives = 13/40 (32%)
Frame = +3
Query: 513 PPXXPPPPAXXLPXPPPXPXXXXPPRPPXPXXVPXPPPPP 632
PP P P A + P P P P P P P
Sbjct: 368 PPVMPQPAAAAVTTPVAAPVAAAAAAVPVPPPAPAPAAAP 407
>SPBC1683.12 |||nicotinic acid plasma membrane transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 482
Score = 25.8 bits (54), Expect = 9.4
Identities = 8/26 (30%), Positives = 16/26 (61%)
Frame = -2
Query: 339 KKYLLSVRVQYRRSLLGVGGYSWTRF 262
+K L+ +R + R+ +G + WT+F
Sbjct: 239 EKELMKIRAEQRQKYMGSPNFDWTQF 264
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 25.8 bits (54), Expect = 9.4
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = +3
Query: 513 PPXXPPPPAXXLPXPPPXPXXXXPPRPPXPXXVPXPPPP 629
PP P PP P P P PP P P P
Sbjct: 500 PPGVPLPPIPGAPGMPNLNMSQPPMVPPGMALPPGMPAP 538
>SPAC2E12.02 |hsf1|hstf, hsf|transcription factor
Hsf1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 609
Score = 25.8 bits (54), Expect = 9.4
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +3
Query: 231 SGTQRSRWINQSGSSYSRQRQAVSVDIELSHLINIS 338
+GTQ S + SGS S+ R+ +L +++N S
Sbjct: 29 NGTQNSMSVGMSGSGSSQNRKITQFSNKLYNMVNDS 64
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,198,630
Number of Sequences: 5004
Number of extensions: 39431
Number of successful extensions: 786
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 138
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 498
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 507285244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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