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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP15_F_P23
         (1058 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe...    38   0.003
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr...    36   0.007
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||...    35   0.017
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac...    28   0.39 
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit...    30   0.48 
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1...    30   0.63 
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p...    30   0.63 
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M...    29   0.78 
SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyc...    28   2.5  
SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces pom...    28   2.5  
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2...    23   3.2  
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ...    27   3.4  
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual    27   4.5  

>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe|chr
            2|||Manual
          Length = 273

 Score = 37.5 bits (83), Expect = 0.003
 Identities = 18/30 (60%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = -3

Query: 1056 GGXGG-GGGXGXXGGGXGGVGXGRXGXVGG 970
            GG GG GGG G  GGG GG G G  G  GG
Sbjct: 235  GGPGGFGGGPGGFGGGLGGFGGGPGGFGGG 264



 Score = 35.1 bits (77), Expect = 0.017
 Identities = 17/29 (58%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = -3

Query: 1056 GGXGG-GGGXGXXGGGXGGVGXGRXGXVG 973
            GG GG GGG G  GGG GG G G  G  G
Sbjct: 242  GGPGGFGGGLGGFGGGPGGFGGGPGGHGG 270



 Score = 34.7 bits (76), Expect = 0.022
 Identities = 25/74 (33%), Positives = 25/74 (33%), Gaps = 2/74 (2%)
 Frame = -3

Query: 1041 GGGXGXXGGGXGGV--GXGRXGXVGGXAXECXXEGXVXXXXGXRXGXVKXXXGXXCXXAR 868
            GGG G  GGG GG   G G  G  GG   E    G      G   G      G       
Sbjct: 187  GGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGG 246

Query: 867  GXXGXGGXGEXGGG 826
               G GG G   GG
Sbjct: 247  FGGGLGGFGGGPGG 260



 Score = 29.9 bits (64), Expect = 0.63
 Identities = 15/39 (38%), Positives = 15/39 (38%)
 Frame = -2

Query: 655 GXGGGXGGXGXGXEXXGGGXXRXXGAXXXXXXGGGAXGG 539
           G GGG GG   G    GGG     G       G G  GG
Sbjct: 225 GFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGG 263



 Score = 27.9 bits (59), Expect = 2.5
 Identities = 19/52 (36%), Positives = 19/52 (36%), Gaps = 1/52 (1%)
 Frame = -2

Query: 655 GXGGGXGGXGXGXEXXGGGXXRXXGAXXXXXXG-GGAXGGXGXXXRXXSXPG 503
           G GG  GG G G E   GG     G       G GG  GG G        PG
Sbjct: 222 GHGGFGGGPG-GFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGGPG 272


>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
            2|||Manual
          Length = 305

 Score = 36.3 bits (80), Expect = 0.007
 Identities = 22/51 (43%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
 Frame = -3

Query: 1056 GGXGG-GGGXGXXGGGXGGV-GXGRXGXVGGXAXECXXEGXVXXXXGXRXG 910
            GG GG  GG G  GGG GG  G GR G  GG        G      G R G
Sbjct: 16   GGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGG 66



 Score = 27.9 bits (59), Expect = 2.5
 Identities = 13/26 (50%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
 Frame = -3

Query: 1056 GGXGG-GGGXGXXGGGXGGVGXGRXG 982
            GG GG GG  G  GG  GG G  + G
Sbjct: 45   GGRGGRGGARGGRGGSSGGRGGAKGG 70


>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 1461

 Score = 35.1 bits (77), Expect = 0.017
 Identities = 15/37 (40%), Positives = 16/37 (43%)
 Frame = +3

Query: 540 PPLAPPPFXXXXYAPLXLXXPPPFXSXPSPXPPXPPP 650
           PP  PP       AP  +  PPP      P PP PPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPP 768



 Score = 28.7 bits (61), Expect = 1.5
 Identities = 13/38 (34%), Positives = 13/38 (34%)
 Frame = +2

Query: 536 PXPXCPPPXXXXXXRXXXPXPPPSXXLXSXPXPPXXPP 649
           P P   PP          P PPP       P PP  PP
Sbjct: 746 PAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783



 Score = 26.6 bits (56), Expect = 5.9
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = +2

Query: 1013 PPPXXPXPPPPPXPP 1057
            P P    PPPPP PP
Sbjct: 754  PAPIMGGPPPPPPPP 768



 Score = 26.2 bits (55), Expect = 7.8
 Identities = 15/42 (35%), Positives = 17/42 (40%), Gaps = 6/42 (14%)
 Frame = +3

Query: 540 PPLAPPPFXXXXYAPLXLXXPPP------FXSXPSPXPPXPP 647
           P  AP P      AP+    PPP        + P P PP PP
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783



 Score = 24.2 bits (50), Expect(2) = 2.5
 Identities = 10/31 (32%), Positives = 12/31 (38%)
 Frame = +2

Query: 761 PXXPTQXAPNXXXVPFXLXXSXPPPXSPXPP 853
           P  P    P     P  +  + PPP  P PP
Sbjct: 753 PPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783



 Score = 21.8 bits (44), Expect(2) = 2.5
 Identities = 10/25 (40%), Positives = 11/25 (44%), Gaps = 2/25 (8%)
 Frame = +2

Query: 590 PXPPPSXXLXSXPXPP--XXPPXAP 658
           P PPP   +   P P     PP AP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAP 756


>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
           Spp42|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 2363

 Score = 27.9 bits (59), Expect = 2.5
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = +3

Query: 600 PPPFXSXPSPXPPXPPP 650
           PPP    PS  PP PPP
Sbjct: 14  PPPGFEPPSQPPPPPPP 30



 Score = 25.4 bits (53), Expect(2) = 0.39
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +2

Query: 1016 PPXXPXPPPPP 1048
            PP  P PPPPP
Sbjct: 5    PPGNPPPPPPP 15



 Score = 23.4 bits (48), Expect(2) = 0.39
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +2

Query: 1034 PPPPPXPP 1057
            PPPPP PP
Sbjct: 9    PPPPPPPP 16


>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
            hand and WH2 motif |Schizosaccharomyces pombe|chr
            1|||Manual
          Length = 1794

 Score = 30.3 bits (65), Expect = 0.48
 Identities = 15/38 (39%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
 Frame = +3

Query: 549  APPPFXXXXYAPLXLXXPPPFXSXPSP-XPPXPPPXPL 659
            APP        P  +  PPP  + P P  PP  PP PL
Sbjct: 1698 APPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPL 1735



 Score = 29.9 bits (64), Expect = 0.63
 Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
 Frame = +3

Query: 534  PXPPLAPPPFXXXXYAPLXLXXP-PPFXSXPSPXPPXPPPXP 656
            P  P++ PP      AP  +  P PP      P PP  PP P
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMP 1724



 Score = 27.1 bits (57), Expect(2) = 0.87
 Identities = 14/38 (36%), Positives = 15/38 (39%)
 Frame = +3

Query: 762  PPPPXSXPPTXXXSPSXSXXXXLXPXPPXPPLXXXXXP 875
            PPPP S PP     P  +      P  P PPL     P
Sbjct: 1708 PPPPMSVPPPPSAPPMPAGP----PSAPPPPLPASSAP 1741



 Score = 27.1 bits (57), Expect = 4.5
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = +2

Query: 1013 PPPXXPXPPPPPXPP 1057
            PPP    PPPP  PP
Sbjct: 1708 PPPPMSVPPPPSAPP 1722



 Score = 20.6 bits (41), Expect(2) = 0.87
 Identities = 7/19 (36%), Positives = 9/19 (47%)
 Frame = +3

Query: 603  PPFXSXPSPXPPXPPPXPL 659
            P   + P    P PPP P+
Sbjct: 1694 PQSAAPPQMSAPTPPPPPM 1712


>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 574

 Score = 29.9 bits (64), Expect = 0.63
 Identities = 22/77 (28%), Positives = 24/77 (31%), Gaps = 3/77 (3%)
 Frame = +3

Query: 435 PPXPXPPGXXXDTPXRXXXXXX--LP-GXXXXRXXXPXPPLAPPPFXXXXYAPLXLXXPP 605
           PP P PP      P          LP G        P  P+APP        P  +   P
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPP-------LPAGMPAAP 467

Query: 606 PFXSXPSPXPPXPPPXP 656
           P        PP P P P
Sbjct: 468 PLPPAAPAPPPAPAPAP 484



 Score = 29.5 bits (63), Expect = 0.83
 Identities = 25/106 (23%), Positives = 27/106 (25%), Gaps = 1/106 (0%)
 Frame = +3

Query: 540 PPLAPPPFXXXXYAPLXLXXPPPFXSXPSPXPPXPPPXPL-XXXQXXXLXRXXXXXXXXX 716
           P   PP       AP     PPP     S  PP  PP P+        +           
Sbjct: 237 PSSRPPERVPSLSAPAPPPIPPPSNGTVS-SPPNSPPRPIAPVSMNPAINSTSKPPLPPP 295

Query: 717 XXXXXTXAXXXXKXXPPPPXSXPPTXXXSPSXSXXXXLXPXPPXPP 854
                  A    K  PPPP          P           PP PP
Sbjct: 296 SSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPP 341



 Score = 29.5 bits (63), Expect = 0.83
 Identities = 35/155 (22%), Positives = 41/155 (26%)
 Frame = +2

Query: 590  PXPPPSXXLXSXPXPPXXPPXAPPXXXXKXXXXXXXXXXIXXXXXXXHXXXRTXXXXPXX 769
            P PP S    S P PP      PP               +       +         P  
Sbjct: 340  PPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPA----PPPAI 395

Query: 770  PTQXAPNXXXVPFXLXXSXPPPXSPXPPXPXXPRAXQQXXPXXXLTXPXLXPXXXXTXPS 949
            P + AP    +      S PP  +P    P  P       P    + P   P      P 
Sbjct: 396  PGRSAPALPPLGNASRTSTPPVPTPPSLPPSAP-------PSLPPSAPPSLPMGAPAAPP 448

Query: 950  LXHSHAXXXXXXXXXXXXXXXPPPXXPXPPPPPXP 1054
            L  S A                PP  P PPP P P
Sbjct: 449  LPPS-APIAPPLPAGMPAAPPLPPAAPAPPPAPAP 482



 Score = 29.1 bits (62), Expect = 1.1
 Identities = 34/141 (24%), Positives = 38/141 (26%), Gaps = 3/141 (2%)
 Frame = +3

Query: 534 PXPPL---APPPFXXXXYAPLXLXXPPPFXSXPSPXPPXPPPXPLXXXQXXXLXRXXXXX 704
           P PP    APPP      AP     PPP  S  +   P  PP  +       L       
Sbjct: 352 PLPPQGRSAPPP-PPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALP------ 404

Query: 705 XXXXXXXXXTXAXXXXKXXPPPPXSXPPTXXXSPSXSXXXXLXPXPPXPPLXXXXXPXNX 884
                      +       P  P S PP+   S   S        PP PP      P   
Sbjct: 405 ---PLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPA 461

Query: 885 XXPXXP*XXLXYXPXPXXPXP 947
             P  P         P  P P
Sbjct: 462 GMPAAPPLPPAAPAPPPAPAP 482



 Score = 28.3 bits (60), Expect = 1.9
 Identities = 31/141 (21%), Positives = 33/141 (23%), Gaps = 1/141 (0%)
 Frame = +3

Query: 435 PPXPXPPGXXXDTPXRXXXXXXLPGXXXXRXXXPXPPLAPPPFXXXXYAPLXLXXP-PPF 611
           PP P P      +P         P            P  PPP      A L      PP 
Sbjct: 254 PPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKRPPP 313

Query: 612 XSXPSPXPPXPPPXPLXXXQXXXLXRXXXXXXXXXXXXXXTXAXXXXKXXPPPPXSXPPT 791
              PS      PP          L                          PPPP S P T
Sbjct: 314 PPPPSRRNRGKPPIG-NGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPST 372

Query: 792 XXXSPSXSXXXXLXPXPPXPP 854
               P  S    +   P  PP
Sbjct: 373 GRQPPPLSSSRAVSNPPAPPP 393



 Score = 28.3 bits (60), Expect = 1.9
 Identities = 23/87 (26%), Positives = 24/87 (27%), Gaps = 4/87 (4%)
 Frame = +1

Query: 805  LPSPXXXPSXPLPPPPXSXXXXXXXTXXXXXXLDXXXPTXPXLXDP----PLXXTLXRXX 972
            +P P    S P PPPP S                   P  P    P    P    L    
Sbjct: 351  IPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNAS 410

Query: 973  SYXTXPPXTHPPXTTPXPPXTPXSTSP 1053
               T P  T P      PP  P S  P
Sbjct: 411  RTSTPPVPTPPSLPPSAPPSLPPSAPP 437


>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
           protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 194

 Score = 29.9 bits (64), Expect = 0.63
 Identities = 17/51 (33%), Positives = 18/51 (35%)
 Frame = -2

Query: 655 GXGGGXGGXGXGXEXXGGGXXRXXGAXXXXXXGGGAXGGXGXXXRXXSXPG 503
           G GG  GG G      GG      G       GGG+ GG     R  S  G
Sbjct: 139 GRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGGSRGG 189



 Score = 29.9 bits (64), Expect = 0.63
 Identities = 15/30 (50%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
 Frame = -3

Query: 1056 GGXGGGGGXGXXGGGXGGVGXG-RXGXVGG 970
            GG GG    G  GG  GG G G R G  GG
Sbjct: 152  GGFGGNSRGGFGGGSRGGFGGGSRGGSRGG 181



 Score = 28.7 bits (61), Expect = 1.5
 Identities = 15/30 (50%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
 Frame = -3

Query: 1056 GGXGGGGGXGXXGGGXGGVGXG-RXGXVGG 970
            GG GGG   G  GG  GG   G R G  GG
Sbjct: 160  GGFGGGSRGGFGGGSRGGSRGGFRGGSRGG 189


>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 309

 Score = 29.5 bits (63), Expect = 0.83
 Identities = 17/41 (41%), Positives = 18/41 (43%)
 Frame = +3

Query: 534 PXPPLAPPPFXXXXYAPLXLXXPPPFXSXPSPXPPXPPPXP 656
           P P   PPP      AP+    PP   S PS  PP PP  P
Sbjct: 166 PIPSSLPPPAQPA--APVK--SPPSAPSLPSAVPPMPPKVP 202



 Score = 27.1 bits (57), Expect(2) = 0.78
 Identities = 13/41 (31%), Positives = 14/41 (34%)
 Frame = +3

Query: 534 PXPPLAPPPFXXXXYAPLXLXXPPPFXSXPSPXPPXPPPXP 656
           P PP           AP     PPP  +   P P   PP P
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIP 168



 Score = 21.0 bits (42), Expect(2) = 0.78
 Identities = 9/31 (29%), Positives = 11/31 (35%)
 Frame = +3

Query: 762 PPPPXSXPPTXXXSPSXSXXXXLXPXPPXPP 854
           PPP     P      + S    + P PP  P
Sbjct: 172 PPPAQPAAPVKSPPSAPSLPSAVPPMPPKVP 202


>SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyces
            pombe|chr 1|||Manual
          Length = 354

 Score = 27.9 bits (59), Expect = 2.5
 Identities = 12/28 (42%), Positives = 12/28 (42%)
 Frame = -3

Query: 1056 GGXGGGGGXGXXGGGXGGVGXGRXGXVG 973
            GG GG G  G  G G GG G       G
Sbjct: 226  GGLGGAGLGGLGGAGLGGFGGANNATAG 253


>SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces
            pombe|chr 2|||Manual
          Length = 381

 Score = 27.9 bits (59), Expect = 2.5
 Identities = 11/17 (64%), Positives = 11/17 (64%)
 Frame = -3

Query: 1056 GGXGGGGGXGXXGGGXG 1006
            GG GGG G G  GGG G
Sbjct: 81   GGPGGGPGEGFPGGGFG 97


>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
            2|||Manual
          Length = 1217

 Score = 23.4 bits (48), Expect(2) = 3.2
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +2

Query: 1034 PPPPPXPP 1057
            PPPPP PP
Sbjct: 1095 PPPPPPPP 1102



 Score = 22.2 bits (45), Expect(2) = 3.2
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +2

Query: 1016 PPXXPXPPPPP 1048
            P   P PPPPP
Sbjct: 1091 PSAVPPPPPPP 1101


>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1420

 Score = 27.5 bits (58), Expect = 3.4
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = +3

Query: 765 PPPXSXPPTXXXSPSXSXXXXLXPXPPXPP 854
           PPP   PP+   +P+ S      P PP PP
Sbjct: 167 PPPSFQPPSAA-APATSLPSDYNPPPPPPP 195



 Score = 26.2 bits (55), Expect = 7.8
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = +2

Query: 1013 PPPXXPXPPPPPXPP 1057
            P P  P PPPP  PP
Sbjct: 234  PLPAPPPPPPPTLPP 248


>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1611

 Score = 27.1 bits (57), Expect = 4.5
 Identities = 26/108 (24%), Positives = 29/108 (26%), Gaps = 7/108 (6%)
 Frame = +2

Query: 359  SPXLQTXKXXXQSXXTRRPXXXPXXAPX----PXPXRXPXXHPXXGPXXXTXPRX*XXXX 526
            SP  +  K    S    +P      AP     P P       P   P     P       
Sbjct: 981  SPTSEPPKDHPPSAPLSKPVSTSPAAPLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTA 1040

Query: 527  XXXPXPXCPPPXXXXXX---RXXXPXPPPSXXLXSXPXPPXXPPXAPP 661
               P P   PP             P P PS  + S P P   PP   P
Sbjct: 1041 PPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAP 1088



 Score = 26.2 bits (55), Expect = 7.8
 Identities = 18/75 (24%), Positives = 20/75 (26%)
 Frame = +2

Query: 437  PXPXPXRXPXXHPXXGPXXXTXPRX*XXXXXXXPXPXCPPPXXXXXXRXXXPXPPPSXXL 616
            P P P   P   P   P     P          P P    P          P P P+  +
Sbjct: 1132 PVPVPSGAP---PVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGV 1188

Query: 617  XSXPXPPXXPPXAPP 661
               P P   PP   P
Sbjct: 1189 PPVPPPSEAPPVPKP 1203


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,002,865
Number of Sequences: 5004
Number of extensions: 30488
Number of successful extensions: 386
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 275
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 557214894
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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