Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP15_F_P21
         (911 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79754-9|CAB02098.1|  312|Caenorhabditis elegans Hypothetical pr...   128   5e-30
U41746-9|AAA83334.3|  559|Caenorhabditis elegans Groundhog (hedg...    32   0.65 
U53154-2|AAC25856.1|  358|Caenorhabditis elegans Hypothetical pr...    30   2.6  
AC006770-2|AAF60593.1| 1145|Caenorhabditis elegans Hypothetical ...    29   6.1  
Z81093-3|CAB03147.1|  610|Caenorhabditis elegans Hypothetical pr...    28   8.1  
U41264-4|AAA82424.1|  220|Caenorhabditis elegans Hypothetical pr...    28   8.1  

>Z79754-9|CAB02098.1|  312|Caenorhabditis elegans Hypothetical
           protein F25H2.10 protein.
          Length = 312

 Score =  128 bits (309), Expect = 5e-30
 Identities = 61/94 (64%), Positives = 72/94 (76%)
 Frame = +3

Query: 300 KNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTXGDLVEVRDKLLENKVQAPARPGAI 479
           KNTM+RKA++ HL  NP+LEKLLPHI  NVGFVFT  DL E+R KLLEN+  APA+ GAI
Sbjct: 57  KNTMIRKALRGHLGKNPSLEKLLPHIVENVGFVFTKEDLGEIRSKLLENRKGAPAKAGAI 116

Query: 480 APLSVVIPAHNTGLXPEKTSFFQALSIPYQDFKG 581
           AP  V +P  NTG+ PEKTSFFQAL IP +  +G
Sbjct: 117 APCDVKLPPQNTGMGPEKTSFFQALQIPTKIARG 150



 Score = 88.2 bits (209), Expect = 7e-18
 Identities = 35/57 (61%), Positives = 49/57 (85%)
 Frame = +2

Query: 131 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGK 301
           M RED++TWK+NYF K+++L +EYPKC +VG DNVGS+QMQ+IR ++RG + +LMGK
Sbjct: 1   MVREDRSTWKANYFTKLVELFEEYPKCLLVGVDNVGSKQMQEIRQAMRGHAEILMGK 57



 Score = 65.7 bits (153), Expect = 4e-11
 Identities = 30/67 (44%), Positives = 40/67 (59%)
 Frame = +1

Query: 487 CQSSFPPTTPASVQRRPLSSRLFLSPTKISKGTIEIIXDVHILKPGDXVGASEAXLXXML 666
           C    PP        +    +    PTKI++GTIEI+ DVH++K GD VGASE+ L  ML
Sbjct: 119 CDVKLPPQNTGMGPEKTSFFQALQIPTKIARGTIEILNDVHLIKEGDKVGASESALLNML 178

Query: 667 NISPFSY 687
            ++PFSY
Sbjct: 179 GVTPFSY 185


>U41746-9|AAA83334.3|  559|Caenorhabditis elegans Groundhog
           (hedgehog-like family)protein 6 protein.
          Length = 559

 Score = 31.9 bits (69), Expect = 0.65
 Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
 Frame = +1

Query: 331 TTWTTIQPSRNCCHTSRATLASCSPXETSLRSVTNCWRT-KSKLQLVLVPLPHCQSSFPP 507
           TT TT  P+     T+RAT    +P  T+ R  T    T ++   L   PL   ++  PP
Sbjct: 281 TTTTTAAPTTPRLTTARAT----TPLATTSRPTTPSPTTPRATTPLATTPLATTRAPLPP 336

Query: 508 TTPASVQRRPLS 543
           + P    +RP++
Sbjct: 337 SPPPRTSKRPVT 348


>U53154-2|AAC25856.1|  358|Caenorhabditis elegans Hypothetical
           protein C33G8.12 protein.
          Length = 358

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
 Frame = +2

Query: 86  LVLKFHRSPYATLSRMGREDKATWKSNYFVKIIQLLD---EYPKCFIVGADNVGSQQMQQ 256
           L+ K   S ++ +SR+ +EDK +  SN+++K   L++   +Y   +    + +GS    Q
Sbjct: 156 LLWKLGESIFSDVSRLSKEDKNSMISNFYIKWQLLMEPAIDYSAQYEQFKNYIGSNAYYQ 215

Query: 257 IRISLRGSSIVLMGKKHNDAQS 322
                 GSS +  G K +D ++
Sbjct: 216 KCAYFYGSS-MQKGNKISDVET 236


>AC006770-2|AAF60593.1| 1145|Caenorhabditis elegans Hypothetical
           protein Y46B2A.3 protein.
          Length = 1145

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = -2

Query: 496 TTDNGAMAPGRAGAWTLFSNSLSRTSTRSPXVNTKPT 386
           TT      P  AG WT+ +N ++R  TR P    +PT
Sbjct: 192 TTRGFTQRPTAAG-WTIRANGITRGQTRVPGTTREPT 227


>Z81093-3|CAB03147.1|  610|Caenorhabditis elegans Hypothetical
           protein F58D2.2 protein.
          Length = 610

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 21/76 (27%), Positives = 30/76 (39%), Gaps = 2/76 (2%)
 Frame = +1

Query: 349 QPSRNCCHTSRATLASCSPXETSLRSVT--NCWRTKSKLQLVLVPLPHCQSSFPPTTPAS 522
           +P  N C   +AT    S   +S+      NC+       + L+  P   +  P   PA+
Sbjct: 169 KPETNICSDKKATYPEGSTPTSSILFANEGNCYAKVGSTLITLLETPETFAQVPRWLPAN 228

Query: 523 VQRRPLSSRLFLSPTK 570
             R  L S LF S  K
Sbjct: 229 EDRLNLKS-LFFSNEK 243


>U41264-4|AAA82424.1|  220|Caenorhabditis elegans Hypothetical
           protein F10E7.5 protein.
          Length = 220

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 17/50 (34%), Positives = 24/50 (48%)
 Frame = +3

Query: 354 LEKLLPHIKGNVGFVFTXGDLVEVRDKLLENKVQAPARPGAIAPLSVVIP 503
           L K    +KG  G +FT     EV  +  E   +  AR G +A  +VV+P
Sbjct: 90  LHKASAILKGQCGLMFTNMSKKEVEAEFSEASEEDYARVGDVATETVVLP 139


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,602,269
Number of Sequences: 27780
Number of extensions: 372792
Number of successful extensions: 1090
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1023
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1090
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2328783996
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)