Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP15_F_P18
(962 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F7.13c |rpl801|rpl8-1, rpl18, rpk5a, rpl2-1, SPAC21E11.02c|... 93 7e-20
SPBC2F12.07c |rpl802|rpl8-2, rpk37, rpk5b|60S ribosomal protein ... 93 7e-20
SPBC839.04 |rpl803|rpl8-3, rpk5-b, rpkD4|60S ribosomal protein L... 93 7e-20
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 30 0.56
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 29 0.74
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 29 1.3
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 28 1.7
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 26 6.9
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 26 6.9
>SPAC1F7.13c |rpl801|rpl8-1, rpl18, rpk5a, rpl2-1, SPAC21E11.02c|60S
ribosomal protein L8|Schizosaccharomyces pombe|chr
1|||Manual
Length = 253
Score = 92.7 bits (220), Expect = 7e-20
Identities = 44/85 (51%), Positives = 54/85 (63%)
Frame = +3
Query: 246 RGAPLAVVHFRDPYKFKTRKELFIAPEGLXTGQXVYCXXXAXLEVXXVMPVGAXPEGXIV 425
RGAPLA V FR+PY ++T E F+A EG+ TGQ VYC A L V V+PVG PEG I+
Sbjct: 53 RGAPLAKVAFRNPYHYRTDVETFVATEGMYTGQFVYCGKNAALTVGNVLPVGEMPEGTII 112
Query: 426 CNLXXKXGXRGXLARASGXXPXVXG 500
N+ K G RG L R+SG + G
Sbjct: 113 SNVEEKAGDRGALGRSSGNYVIIVG 137
Score = 81.8 bits (193), Expect = 1e-16
Identities = 37/53 (69%), Positives = 46/53 (86%)
Frame = +2
Query: 86 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDXIHDPG 244
MGRVIRAQRK +G +F +HT+ RKGA +LR+LD+AERHGYI+GVV+ IHDPG
Sbjct: 1 MGRVIRAQRK-SGGIFQAHTRLRKGAAQLRTLDFAERHGYIRGVVQKIIHDPG 52
>SPBC2F12.07c |rpl802|rpl8-2, rpk37, rpk5b|60S ribosomal protein
L8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 253
Score = 92.7 bits (220), Expect = 7e-20
Identities = 44/85 (51%), Positives = 54/85 (63%)
Frame = +3
Query: 246 RGAPLAVVHFRDPYKFKTRKELFIAPEGLXTGQXVYCXXXAXLEVXXVMPVGAXPEGXIV 425
RGAPLA V FR+PY ++T E F+A EG+ TGQ VYC A L V V+PVG PEG I+
Sbjct: 53 RGAPLAKVAFRNPYHYRTDVETFVATEGMYTGQFVYCGKNAALTVGNVLPVGEMPEGTII 112
Query: 426 CNLXXKXGXRGXLARASGXXPXVXG 500
N+ K G RG L R+SG + G
Sbjct: 113 SNVEEKAGDRGALGRSSGNYVIIVG 137
Score = 81.8 bits (193), Expect = 1e-16
Identities = 37/53 (69%), Positives = 46/53 (86%)
Frame = +2
Query: 86 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDXIHDPG 244
MGRVIRAQRK +G +F +HT+ RKGA +LR+LD+AERHGYI+GVV+ IHDPG
Sbjct: 1 MGRVIRAQRK-SGGIFQAHTRLRKGAAQLRTLDFAERHGYIRGVVQKIIHDPG 52
>SPBC839.04 |rpl803|rpl8-3, rpk5-b, rpkD4|60S ribosomal protein
L8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 253
Score = 92.7 bits (220), Expect = 7e-20
Identities = 44/85 (51%), Positives = 54/85 (63%)
Frame = +3
Query: 246 RGAPLAVVHFRDPYKFKTRKELFIAPEGLXTGQXVYCXXXAXLEVXXVMPVGAXPEGXIV 425
RGAPLA V FR+PY ++T E F+A EG+ TGQ VYC A L V V+PVG PEG I+
Sbjct: 53 RGAPLAKVAFRNPYHYRTDVETFVATEGMYTGQFVYCGKNAALTVGNVLPVGEMPEGTII 112
Query: 426 CNLXXKXGXRGXLARASGXXPXVXG 500
N+ K G RG L R+SG + G
Sbjct: 113 SNVEEKAGDRGALGRSSGNYVIIVG 137
Score = 81.8 bits (193), Expect = 1e-16
Identities = 37/53 (69%), Positives = 46/53 (86%)
Frame = +2
Query: 86 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDXIHDPG 244
MGRVIRAQRK +G +F +HT+ RKGA +LR+LD+AERHGYI+GVV+ IHDPG
Sbjct: 1 MGRVIRAQRK-SGGIFQAHTRLRKGAAQLRTLDFAERHGYIRGVVQKIIHDPG 52
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 29.9 bits (64), Expect = 0.56
Identities = 17/56 (30%), Positives = 18/56 (32%)
Frame = +1
Query: 598 PPAXXXSXTXPPX*QXXHXHXPNXPXPPPXXLPPYVXSXXALXPPPXPPSPXXGXP 765
PP S PP P PPP PP + PPP P S P
Sbjct: 1690 PPVRPQSAA-PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVP 1744
Score = 29.1 bits (62), Expect = 0.98
Identities = 16/46 (34%), Positives = 19/46 (41%)
Frame = +1
Query: 670 PXPPPXXLPPYVXSXXALXPPPXPPSPXXGXPPXLLTXTAFPXPXP 807
P PPP +PP + PP P P PP L +A P P
Sbjct: 1707 PPPPPMSVPPPPSA------PPMPAGPPSAPPPPLPASSAPSVPNP 1746
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 29.5 bits (63), Expect = 0.74
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +1
Query: 670 PXPPPXXLPPYVXSXXALXPPPXPPSPXXGXPP 768
P P P +PP PPP PP PP
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPP 776
Score = 28.7 bits (61), Expect = 1.3
Identities = 17/54 (31%), Positives = 18/54 (33%)
Frame = +1
Query: 598 PPAXXXSXTXPPX*QXXHXHXPNXPXPPPXXLPPYVXSXXALXPPPXPPSPXXG 759
PP T P P PPP PP V PPP PP+ G
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAG 788
Score = 27.1 bits (57), Expect = 3.9
Identities = 15/48 (31%), Positives = 17/48 (35%), Gaps = 2/48 (4%)
Frame = +1
Query: 670 PXPPPXXLPPYVXSXXALXPPPXP--PSPXXGXPPXLLTXTAFPXPXP 807
P PPP + P PPP P P PP + P P P
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 25.8 bits (54), Expect = 9.1
Identities = 17/68 (25%), Positives = 24/68 (35%)
Frame = +1
Query: 538 PXLDPXXVLPSXXXGLVRIRPPAXXXSXTXPPX*QXXHXHXPNXPXPPPXXLPPYVXSXX 717
P P ++P+ + + PPA PP P PPP PP V +
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP---PPAVSAGG 789
Query: 718 ALXPPPXP 741
+ P P
Sbjct: 790 SRYYAPAP 797
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 28.7 bits (61), Expect = 1.3
Identities = 21/54 (38%), Positives = 22/54 (40%), Gaps = 8/54 (14%)
Frame = +1
Query: 670 PXPPPXXLPPYVXSXXALXPPPXPPS-------PXXGXPP-XLLTXTAFPXPXP 807
P PPP PP V PP PPS P G PP + T A P P P
Sbjct: 1190 PVPPPSEAPP-VPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAP 1242
Score = 28.3 bits (60), Expect = 1.7
Identities = 18/53 (33%), Positives = 18/53 (33%), Gaps = 7/53 (13%)
Frame = +1
Query: 670 PXPPPXXLPPYVXSXXALXPPPXP-------PSPXXGXPPXLLTXTAFPXPXP 807
P P P PP A P P P P P G PP A P P P
Sbjct: 1151 PVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKP 1203
Score = 27.9 bits (59), Expect = 2.3
Identities = 23/83 (27%), Positives = 28/83 (33%), Gaps = 8/83 (9%)
Frame = +1
Query: 592 IRPPAXXXSXTXPPX*QXXHXHXPNXPXPPPXXLPPYVXSXXALXPP--------PXPPS 747
I PP + P + H P+ P P P + A PP P P
Sbjct: 969 IPPPLPVSNILSSPTSEPPKDHPPSAPLSKPVSTSP--AAPLARVPPVPKLSSKAPPVPL 1026
Query: 748 PXXGXPPXLLTXTAFPXPXPXLT 816
P PP + TA P P P T
Sbjct: 1027 PSADAPPIPVPSTAPPVPIPTST 1049
Score = 27.9 bits (59), Expect = 2.3
Identities = 20/53 (37%), Positives = 20/53 (37%), Gaps = 7/53 (13%)
Frame = +1
Query: 670 PXPPPXXLPPYVXSXXALXPPPXPPS-------PXXGXPPXLLTXTAFPXPXP 807
P P P P V A PP PPS P G PP TA P P P
Sbjct: 1170 PVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTP 1222
Score = 27.5 bits (58), Expect = 3.0
Identities = 15/44 (34%), Positives = 18/44 (40%), Gaps = 3/44 (6%)
Frame = +2
Query: 614 PXXPXXXXDXPXTGXPQTXPXXPL-XXCPPMXR--RXXPSTPPP 736
P P D P P T P P+ PP+ + PS PPP
Sbjct: 1022 PPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPP 1065
Score = 26.6 bits (56), Expect = 5.2
Identities = 18/71 (25%), Positives = 25/71 (35%), Gaps = 3/71 (4%)
Frame = +1
Query: 562 LPSXXXGLVRIRPPAXXXSXTXPPX*QXXHXHXPNX---PXPPPXXLPPYVXSXXALXPP 732
+P+ G+ + PA PP + P+ P PPP PP L P
Sbjct: 1171 VPAPSSGIPPVPKPAAGVPPVPPPS-EAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPV 1229
Query: 733 PXPPSPXXGXP 765
P P + P
Sbjct: 1230 PVPTAKAPPVP 1240
Score = 26.2 bits (55), Expect = 6.9
Identities = 16/46 (34%), Positives = 17/46 (36%)
Frame = +1
Query: 670 PXPPPXXLPPYVXSXXALXPPPXPPSPXXGXPPXLLTXTAFPXPXP 807
P P P +PP V PP P P PP A P P P
Sbjct: 1084 PVPAPSGIPP-VPKPSVAAPP--VPKPSVAVPPVPAPSGAPPVPKP 1126
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 28.3 bits (60), Expect = 1.7
Identities = 17/60 (28%), Positives = 22/60 (36%), Gaps = 1/60 (1%)
Frame = +1
Query: 592 IRPP-AXXXSXTXPPX*QXXHXHXPNXPXPPPXXLPPYVXSXXALXPPPXPPSPXXGXPP 768
+RPP + + PP P+ P P LPP + PP PS PP
Sbjct: 137 LRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPP 196
Score = 25.8 bits (54), Expect = 9.1
Identities = 14/52 (26%), Positives = 19/52 (36%), Gaps = 3/52 (5%)
Frame = +1
Query: 661 PNXPXPPPXXLPPYVXSXXALX---PPPXPPSPXXGXPPXLLTXTAFPXPXP 807
P+ P P P PP + PPP P+ PP + + P P
Sbjct: 147 PSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMP 198
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 26.2 bits (55), Expect = 6.9
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +1
Query: 661 PNXPXPPPXXLPPYVXSXXALXPPPXPP 744
P P PPP PP + PPP PP
Sbjct: 6 PGNPPPPP---PPPGFEPPSQPPPPPPP 30
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 26.2 bits (55), Expect = 6.9
Identities = 22/88 (25%), Positives = 23/88 (26%), Gaps = 2/88 (2%)
Frame = +3
Query: 549 PPXXSAXXXXRPGPHSSPXXXXLXXQXXXXTXXAXAXPKXXPSXPXXXAPLCXVXXRPXP 728
PP P +SP P PS A L RP P
Sbjct: 254 PPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKRPPP 313
Query: 729 PPPXXXTRXWXP--XXPSHXHRLPPAXP 806
PPP P S LPP P
Sbjct: 314 PPPPSRRNRGKPPIGNGSSNSSLPPPPP 341
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,361,543
Number of Sequences: 5004
Number of extensions: 36875
Number of successful extensions: 159
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 82
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 132
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 493304942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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