Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP15_F_P17
(1003 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 40 6e-04
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 36 0.012
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 33 0.048
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 33 0.063
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 31 0.25
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 31 0.34
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 31 0.34
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 29 0.78
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 28 1.8
SPAC22F8.10c |sap145||U2 snRNP-associated protein Sap145 |Schizo... 28 2.4
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 27 3.1
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 27 4.1
SPBC1A4.03c |top2|ptr11|DNA topoisomerase II|Schizosaccharomyces... 27 5.5
SPAC22F8.11 |plc1||phosphoinositide phospholipase C Plc1|Schizos... 27 5.5
SPAPB1A10.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 26 7.2
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 26 9.6
SPAC18B11.02c |||pseudouridylate synthase |Schizosaccharomyces p... 26 9.6
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 26 9.6
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 39.9 bits (89), Expect = 6e-04
Identities = 29/106 (27%), Positives = 35/106 (33%), Gaps = 5/106 (4%)
Frame = +3
Query: 615 PXPXTTPPQVXXXXXXRPPXPXPXXPPXSXXPT----PXPXXXLXILHXXXPPPPXPPXP 782
P P PP V PP P P P P+ P P I P PP P
Sbjct: 1134 PVPSGAPP-VPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVP 1192
Query: 783 PPXXXXPLPRPXRS-XXLPXGXXRPPKXSSTXTCXXXPPPXNXTXP 917
PP P+P+P +P PP + + P P P
Sbjct: 1193 PPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPP 1238
Score = 36.3 bits (80), Expect = 0.007
Identities = 30/126 (23%), Positives = 32/126 (25%)
Frame = +3
Query: 591 PXSXPAXXPXPXTTPPQVXXXXXXRPPXPXPXXPPXSXXPTPXPXXXLXILHXXXPPPPX 770
P + P + P V PP P P P PT P PPP
Sbjct: 1007 PLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPV 1066
Query: 771 PPXPPPXXXXPLPRPXRSXXLPXGXXRPPKXSSTXTCXXXPPPXNXTXPATHXXPFWPHX 950
P P P P G PK S P PA P P
Sbjct: 1067 PAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKP 1126
Query: 951 XAAXXP 968
A P
Sbjct: 1127 SVAAPP 1132
Score = 32.7 bits (71), Expect = 0.083
Identities = 29/111 (26%), Positives = 36/111 (32%), Gaps = 10/111 (9%)
Frame = +3
Query: 597 SXPAXXPXPXTTPP----QVXXXXXXRPPXPXPXXPPXSXXPTPXPXXXLXILHXXXPPP 764
S P P PP + PP P P S + P L + PP
Sbjct: 959 SGPRPAAPPSIPPPLPVSNILSSPTSEPPKDHPPSAPLSKPVSTSPAAPLARV----PPV 1014
Query: 765 PX-----PPXP-PPXXXXPLPRPXRSXXLPXGXXRPPKXSSTXTCXXXPPP 899
P PP P P P+P P + +P PP S+ PPP
Sbjct: 1015 PKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPP 1065
Score = 31.9 bits (69), Expect = 0.15
Identities = 27/95 (28%), Positives = 32/95 (33%), Gaps = 1/95 (1%)
Frame = +3
Query: 591 PXSXPAXXPXPXTTPPQVXXXXXXRPPXPXPXXPPXSXXPTPXPXXXLXILHXXXPPPPX 770
P + P P PP V PP P PP + P P P L + P
Sbjct: 1184 PAAGVPPVPPPSEAPP-VPKPSVGVPPVP----PPSTAPPVPTPSAGLPPV--PVPTAKA 1236
Query: 771 PPXPPPXXXXP-LPRPXRSXXLPXGXXRPPKXSST 872
PP P P P + P S P P SS+
Sbjct: 1237 PPVPAPSSEAPSVSTPRSSVPSPHSNASPSPTSSS 1271
Score = 31.1 bits (67), Expect = 0.25
Identities = 30/116 (25%), Positives = 35/116 (30%), Gaps = 7/116 (6%)
Frame = +1
Query: 676 PXXPTXPXXXXPPXXLHXXXPFSTXHXPPPHXXPXPPLXPXPXSRXRXAPPLYRXAX--- 846
P P P P PP P P + P APP+ + +
Sbjct: 1112 PPVPAPSGAPPVPKPSVAAPPVPVPSGAPP--VPKPSVAAPPVPAPSGAPPVPKPSVAAP 1169
Query: 847 ----PGLXXPPPXXLA*XXPHPPTXXXXPPTXXPSGHTXXLPPXPPRXTASLATTP 1002
P PP A P P PP PS +PP PP TA TP
Sbjct: 1170 PVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPS---VGVPPVPPPSTAPPVPTP 1222
Score = 30.7 bits (66), Expect = 0.34
Identities = 25/115 (21%), Positives = 37/115 (32%), Gaps = 9/115 (7%)
Frame = +1
Query: 685 PTXPXXXXPPXXLHXXXPFSTXHXPPPHXXPXP---PLXPXPXSRXRXAPPLYRXAX--P 849
P P PP + T P H P P+ P + PP+ + + P
Sbjct: 963 PAAPPSIPPPLPVSNILSSPTSEPPKDHPPSAPLSKPVSTSPAAPLARVPPVPKLSSKAP 1022
Query: 850 GLXXP----PPXXLA*XXPHPPTXXXXPPTXXPSGHTXXLPPXPPRXTASLATTP 1002
+ P PP + P P PP S PP P ++ + + P
Sbjct: 1023 PVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIP 1077
Score = 29.5 bits (63), Expect = 0.78
Identities = 23/110 (20%), Positives = 31/110 (28%), Gaps = 3/110 (2%)
Frame = +3
Query: 597 SXPAXXPXPXTTPPQVXXXXXXRP---PXPXPXXPPXSXXPTPXPXXXLXILHXXXPPPP 767
S P P P + P + P P P P S P P + + P
Sbjct: 1061 SAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGA 1120
Query: 768 XPPXPPPXXXXPLPRPXRSXXLPXGXXRPPKXSSTXTCXXXPPPXNXTXP 917
P P P+P P + +P P + P P P
Sbjct: 1121 PPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPP 1170
Score = 27.5 bits (58), Expect = 3.1
Identities = 29/127 (22%), Positives = 36/127 (28%), Gaps = 7/127 (5%)
Frame = +3
Query: 615 PXPXTTPPQVXXXXXXRP-PXPXPXXPPXSXXPTPXPXXXLXILHXXXPPPPXPPXP--- 782
P P P V P P P PP + P PPP P
Sbjct: 1143 PKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPK 1202
Query: 783 PPXXXXPLPRPXRSXXLP-XGXXRPPKXSSTXTCXXXPPPXNXTXPATHXXPF--WPHXX 953
P P+P P + +P PP T P P + + PH
Sbjct: 1203 PSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEAPSVSTPRSSVPSPHSN 1262
Query: 954 AAXXPXS 974
A+ P S
Sbjct: 1263 ASPSPTS 1269
Score = 27.1 bits (57), Expect = 4.1
Identities = 27/101 (26%), Positives = 35/101 (34%)
Frame = +1
Query: 685 PTXPXXXXPPXXLHXXXPFSTXHXPPPHXXPXPPLXPXPXSRXRXAPPLYRXAXPGLXXP 864
P+ P P P + P P PP+ P P APP+ + P + P
Sbjct: 1060 PSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPV-PKPSVA---APPVPK---PSVAVP 1112
Query: 865 PPXXLA*XXPHPPTXXXXPPTXXPSGHTXXLPPXPPRXTAS 987
P + P P PP PSG PP P A+
Sbjct: 1113 PVPAPSGAPPVPKPSVAAPPVPVPSG----APPVPKPSVAA 1149
Score = 26.6 bits (56), Expect = 5.5
Identities = 15/61 (24%), Positives = 18/61 (29%)
Frame = +2
Query: 635 PXGXXXXPXTPPXXPXXXPXXLXTPHPXXXTFXXHSPXXTXPPPTPXXPPPSXPXPXPAX 814
P G P P P P P P + PP P + P P P+
Sbjct: 1079 PSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSG 1138
Query: 815 A 817
A
Sbjct: 1139 A 1139
Score = 26.2 bits (55), Expect = 7.2
Identities = 21/76 (27%), Positives = 23/76 (30%), Gaps = 2/76 (2%)
Frame = +3
Query: 615 PXPXTTPPQVXXXXXXRP-PXPXPXXPPXSXXPTPXPXXXLXILHXXXPPPP-XPPXPPP 788
P P P V P P P PP P + P P PP P P
Sbjct: 1105 PKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKP 1164
Query: 789 XXXXPLPRPXRSXXLP 836
P P P S +P
Sbjct: 1165 SVAAP-PVPAPSSGIP 1179
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 35.5 bits (78), Expect = 0.012
Identities = 29/100 (29%), Positives = 31/100 (31%)
Frame = +3
Query: 597 SXPAXXPXPXTTPPQVXXXXXXRPPXPXPXXPPXSXXPTPXPXXXLXILHXXXPPPPXPP 776
S P P RPP P PP S P + PPPP PP
Sbjct: 288 SKPPLPPPSSRVSAAALAANKKRPPPP----PPPSRRNRGKPPIGNGSSNSSLPPPPPPP 343
Query: 777 XPPPXXXXPLPRPXRSXXLPXGXXRPPKXSSTXTCXXXPP 896
PLP RS P PP S+ T PP
Sbjct: 344 RSNAAGSIPLPPQGRSAPPP-----PPPRSAPSTGRQPPP 378
Score = 35.1 bits (77), Expect = 0.016
Identities = 35/138 (25%), Positives = 37/138 (26%), Gaps = 7/138 (5%)
Frame = +3
Query: 591 PXSXPAXXPXPXTTPPQVXXXXXXRPPXPXPXXPPXSXXPTPXPXXXLXILHXXXPPPPX 770
P S P+ P PP PP P P P S P P PP
Sbjct: 366 PRSAPSTGRQP---PPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPS 422
Query: 771 -----PPXPPPXXXXPLPR--PXRSXXLPXGXXRPPKXSSTXTCXXXPPPXNXTXPATHX 929
PP PP LP P P PP + PP PA
Sbjct: 423 LPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAP 482
Query: 930 XPFWPHXXAAXXPXSXXR 983
P P A P R
Sbjct: 483 APAAPVASIAELPQQDGR 500
Score = 33.5 bits (73), Expect = 0.048
Identities = 29/112 (25%), Positives = 34/112 (30%)
Frame = +1
Query: 667 PXXPXXPTXPXXXXPPXXLHXXXPFSTXHXPPPHXXPXPPLXPXPXSRXRXAPPLYRXAX 846
P P P+ PP PPP + P R PP R A
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAP 370
Query: 847 PGLXXPPPXXLA*XXPHPPTXXXXPPTXXPSGHTXXLPPXPPRXTASLATTP 1002
PPP + +PP PP P P PP AS +TP
Sbjct: 371 STGRQPPPLSSSRAVSNPPA----PPPAIPGRSA---PALPPLGNASRTSTP 415
Score = 30.7 bits (66), Expect = 0.34
Identities = 25/96 (26%), Positives = 29/96 (30%), Gaps = 7/96 (7%)
Frame = +2
Query: 554 PPNVQXTNXKLAPXIXARXRXTSXNNTPXGXXXXPXTPPXXPXXXPXXLXTPHPXXXTFX 733
PP + + P + R TS P P PP P P L P
Sbjct: 392 PPAIPGRSAPALPPLGNASR-TSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLP 450
Query: 734 XHSPXXTX-------PPPTPXXPPPSXPXPXPAXAA 820
+P PP P P P P PA AA
Sbjct: 451 PSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAA 486
Score = 30.3 bits (65), Expect = 0.45
Identities = 19/71 (26%), Positives = 25/71 (35%), Gaps = 1/71 (1%)
Frame = +1
Query: 763 PHXXPXPPLXPX-PXSRXRXAPPLYRXAXPGLXXPPPXXLA*XXPHPPTXXXXPPTXXPS 939
P PP+ P P SR P P PP P+ P P + P+
Sbjct: 224 PTSTSAPPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPA 283
Query: 940 GHTXXLPPXPP 972
++ PP PP
Sbjct: 284 INSTSKPPLPP 294
Score = 28.7 bits (61), Expect = 1.4
Identities = 33/126 (26%), Positives = 38/126 (30%), Gaps = 12/126 (9%)
Frame = +1
Query: 661 NAPXXPXXPTXPXXXXPPXXLHXXXPFSTXHXPPPHXX--PXPPLXPXPXSRXRXAPP-- 828
+AP P + P P L S PPP P L P + PP
Sbjct: 359 SAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVP 418
Query: 829 ----LYRXAXPGLXX--PP--PXXLA*XXPHPPTXXXXPPTXXPSGHTXXLPPXPPRXTA 984
L A P L PP P P PP+ PP LPP P
Sbjct: 419 TPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPP 478
Query: 985 SLATTP 1002
+ A P
Sbjct: 479 APAPAP 484
Score = 27.5 bits (58), Expect = 3.1
Identities = 24/99 (24%), Positives = 27/99 (27%), Gaps = 1/99 (1%)
Frame = +3
Query: 606 AXXPXPXTTPPQVXXXXXXRPPXPXPXXPPXSXXPTPXPXXXLXILHXXXPPPPXPPXP- 782
A P + PP RPP P + P P P PP PP P
Sbjct: 221 AGTPTSTSAPPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNG-----TVSSPPNSPPRPI 275
Query: 783 PPXXXXPLPRPXRSXXLPXGXXRPPKXSSTXTCXXXPPP 899
P P LP R + PPP
Sbjct: 276 APVSMNPAINSTSKPPLPPPSSRVSAAALAANKKRPPPP 314
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 33.5 bits (73), Expect = 0.048
Identities = 18/54 (33%), Positives = 19/54 (35%)
Frame = +3
Query: 621 PXTTPPQVXXXXXXRPPXPXPXXPPXSXXPTPXPXXXLXILHXXXPPPPXPPXP 782
P PP V P P P P P P P + PPPP PP P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPG--VAGAGPPPPPPPPP 783
Score = 32.7 bits (71), Expect = 0.083
Identities = 16/50 (32%), Positives = 18/50 (36%)
Frame = +3
Query: 666 PPXPXPXXPPXSXXPTPXPXXXLXILHXXXPPPPXPPXPPPXXXXPLPRP 815
PP P P + P P P + PPPP PP P P P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 29.9 bits (64), Expect = 0.59
Identities = 19/59 (32%), Positives = 23/59 (38%), Gaps = 6/59 (10%)
Frame = +2
Query: 662 TPPXXPXXXPXXLXTPHPXXXTFXXHSPXXTXPPPTPXXP------PPSXPXPXPAXAA 820
+PP P + TP P +P PPP P P PP P P PA +A
Sbjct: 731 SPPPPPPAV--IVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSA 787
Score = 29.1 bits (62), Expect = 1.0
Identities = 18/62 (29%), Positives = 21/62 (33%)
Frame = +3
Query: 666 PPXPXPXXPPXSXXPTPXPXXXLXILHXXXPPPPXPPXPPPXXXXPLPRPXRSXXLPXGX 845
PP P P + P P P + PPP PP P P P P + G
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIM----GGPPPPPPPPGVAGAGPPPPPPPPPAVSAGG 789
Query: 846 XR 851
R
Sbjct: 790 SR 791
Score = 27.9 bits (59), Expect = 2.4
Identities = 16/62 (25%), Positives = 17/62 (27%), Gaps = 2/62 (3%)
Frame = +3
Query: 603 PAXXPXPXTTPPQVXXXXXXRPPXPXPXXPPXSXXPTPXPXXXLXI--LHXXXPPPPXPP 776
P P P PP PP P P P P P + P P P
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEP 801
Query: 777 XP 782
P
Sbjct: 802 EP 803
Score = 27.1 bits (57), Expect = 4.1
Identities = 14/48 (29%), Positives = 17/48 (35%)
Frame = +3
Query: 756 PPPPXPPXPPPXXXXPLPRPXRSXXLPXGXXRPPKXSSTXTCXXXPPP 899
PPPP P P+P P + + G PP PPP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIM-GGPPPPPPPPGVAGAGPPPPP 779
Score = 26.6 bits (56), Expect = 5.5
Identities = 17/52 (32%), Positives = 19/52 (36%), Gaps = 4/52 (7%)
Frame = +3
Query: 756 PPPPXP----PXPPPXXXXPLPRPXRSXXLPXGXXRPPKXSSTXTCXXXPPP 899
PPPP P P P P P+P P P PP + PPP
Sbjct: 732 PPPPPPAVIVPTPAPAPI-PVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 33.1 bits (72), Expect = 0.063
Identities = 20/60 (33%), Positives = 23/60 (38%), Gaps = 4/60 (6%)
Frame = +3
Query: 621 PXTTPPQVXXXXXXRPPXPXPXXPPXSXXPT--PXPXXXLXIL--HXXXPPPPXPPXPPP 788
P T P+ PP P P PP S + P P + L PPPP P PP
Sbjct: 224 PPTYTPKQADPLPAPPPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPPATPSQPP 283
Score = 27.9 bits (59), Expect = 2.4
Identities = 16/49 (32%), Positives = 19/49 (38%), Gaps = 2/49 (4%)
Frame = +3
Query: 756 PPPPXPPXPPP--XXXXPLPRPXRSXXLPXGXXRPPKXSSTXTCXXXPP 896
PPPP PP PP LP P R+ P +T + PP
Sbjct: 238 PPPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPPATPSQPPRPP 286
Score = 26.6 bits (56), Expect = 5.5
Identities = 21/92 (22%), Positives = 24/92 (26%)
Frame = +3
Query: 597 SXPAXXPXPXTTPPQVXXXXXXRPPXPXPXXPPXSXXPTPXPXXXLXILHXXXPPPPXPP 776
S P P P PP P P P P PP
Sbjct: 166 SPPPSFQPPSAAAPATSLPSDYNPPPPPPPPPAVEDQAADANEPDDYYSSGRAVSPEIPP 225
Query: 777 XPPPXXXXPLPRPXRSXXLPXGXXRPPKXSST 872
P PLP P P PP+ ++T
Sbjct: 226 TYTPKQADPLPAPPP----PPPPTLPPQSTNT 253
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 31.1 bits (67), Expect = 0.25
Identities = 23/64 (35%), Positives = 23/64 (35%)
Frame = -1
Query: 856 GGRXXPSGKXXERXGRGXGXXXXGGGXGGXGGGGXXXWRMXXKXXGXGVGXXEXGGXXGW 677
G R G R G G GGG GG GGG R G G GG G
Sbjct: 6 GSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGAR--GGRGGRGGARGGRGGSSG- 62
Query: 676 GXGG 665
G GG
Sbjct: 63 GRGG 66
Score = 28.3 bits (60), Expect = 1.8
Identities = 20/55 (36%), Positives = 20/55 (36%)
Frame = -3
Query: 923 GGXXCXVGGWGXXXASXCGGGFXRPGXAXR*XGGAXRXREXGXGXRGGXGXXWGG 759
GG GG G G G R G GGA R G RGG G GG
Sbjct: 9 GGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGG 63
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 30.7 bits (66), Expect = 0.34
Identities = 24/78 (30%), Positives = 25/78 (32%)
Frame = -1
Query: 898 GGGXXXQVXVEEXXGGRXXPSGKXXERXGRGXGXXXXGGGXGGXGGGGXXXWRMXXKXXG 719
GGG GG G+ G G GG GG GG G G
Sbjct: 194 GGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGG 253
Query: 718 XGVGXXEXGGXXGWGXGG 665
G G GG G G GG
Sbjct: 254 FGGGPGGFGGGPG-GHGG 270
Score = 27.1 bits (57), Expect = 4.1
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -1
Query: 841 PSGKXXERXGRGXGXXXXGGGXGGXGGGG 755
P G G G G GGG GG GG G
Sbjct: 244 PGGFGGGLGGFGGGPGGFGGGPGGHGGPG 272
Score = 26.2 bits (55), Expect = 7.2
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -2
Query: 807 GXGXGXEGGGXXGVGGGXVXXGEWXXXVXXXGW 709
G G G GGG G GGG G GW
Sbjct: 241 GGGPGGFGGGLGGFGGGPGGFGGGPGGHGGPGW 273
Score = 25.8 bits (54), Expect = 9.6
Identities = 23/70 (32%), Positives = 24/70 (34%), Gaps = 4/70 (5%)
Frame = -1
Query: 787 GGGXGGXGGGGXXXWRMXXKXXGXGVGXXE---XGGXXGWGXG-GRXXXXXXTXGGVVXG 620
GGG GG GGG G G E GG G+G G G GG G
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGG 246
Query: 619 XGSXAGXDXG 590
G G G
Sbjct: 247 FGGGLGGFGG 256
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 30.7 bits (66), Expect = 0.34
Identities = 25/105 (23%), Positives = 29/105 (27%), Gaps = 3/105 (2%)
Frame = +3
Query: 621 PXTTPPQVXXXXXXRPPX---PXPXXPPXSXXPTPXPXXXLXILHXXXPPPPXPPXPPPX 791
P + P RPP P P PP S P + PPP P P
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKS 183
Query: 792 XXXPLPRPXRSXXLPXGXXRPPKXSSTXTCXXXPPPXNXTXPATH 926
P +P PP S P + PA H
Sbjct: 184 PPSAPSLPSAVPPMPP-KVPPPPLSQAPVANTSSRPSSFAPPAGH 227
Score = 30.7 bits (66), Expect = 0.34
Identities = 26/81 (32%), Positives = 30/81 (37%), Gaps = 1/81 (1%)
Frame = +1
Query: 760 PPHXXPXPPLXPXPXSRXRXAPPLYRXAXP-GLXXPPPXXLA*XXPHPPTXXXXPPTXXP 936
PP P P P P APP+ A P PPP A PP+ P P
Sbjct: 139 PPTSAPPRPSIPPPSPAS--APPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPP 196
Query: 937 SGHTXXLPPXPPRXTASLATT 999
+PP PP A +A T
Sbjct: 197 M--PPKVPP-PPLSQAPVANT 214
Score = 28.3 bits (60), Expect = 1.8
Identities = 23/100 (23%), Positives = 28/100 (28%)
Frame = +1
Query: 676 PXXPTXPXXXXPPXXLHXXXPFSTXHXPPPHXXPXPPLXPXPXSRXRXAPPLYRXAXPGL 855
P P PP P + P P P P P AP L P
Sbjct: 139 PPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMP 198
Query: 856 XXPPPXXLA*XXPHPPTXXXXPPTXXPSGHTXXLPPXPPR 975
PP L+ P T P+GH + P+
Sbjct: 199 PKVPPPPLS-QAPVANTSSRPSSFAPPAGHAPNVTSESPK 237
Score = 27.9 bits (59), Expect = 2.4
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +2
Query: 740 SPXXTXPPPTPXXPPPSXPXPXPAXA 817
+P PPT P PS P P PA A
Sbjct: 132 TPQSELRPPTSAPPRPSIPPPSPASA 157
Score = 26.2 bits (55), Expect = 7.2
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +3
Query: 759 PPPXPPXPPPXXXXPLP 809
PPP PP P P P P
Sbjct: 5 PPPPPPAPAPAAAAPAP 21
Score = 26.2 bits (55), Expect = 7.2
Identities = 15/61 (24%), Positives = 20/61 (32%)
Frame = +2
Query: 743 PXXTXPPPTPXXPPPSXPXPXPAXAALXXFTGXLXPASXXLLHXNLXXXSPTXQPHXPXH 922
P + PPP+P PP P ++L P +L P P P
Sbjct: 145 PRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPP 204
Query: 923 P 925
P
Sbjct: 205 P 205
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 29.5 bits (63), Expect = 0.78
Identities = 15/49 (30%), Positives = 16/49 (32%)
Frame = +2
Query: 677 PXXXPXXLXTPHPXXXTFXXHSPXXTXPPPTPXXPPPSXPXPXPAXAAL 823
P P + P P P PPP P PS P P A L
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNPGDRSALL 1753
Score = 29.1 bits (62), Expect = 1.0
Identities = 22/71 (30%), Positives = 23/71 (32%)
Frame = +3
Query: 591 PXSXPAXXPXPXTTPPQVXXXXXXRPPXPXPXXPPXSXXPTPXPXXXLXILHXXXPPPPX 770
P S P P PPQ+ PP P PP S P P PPPP
Sbjct: 1686 PVSTPPVRPQS-AAPPQMSAPTPPPPPMSVP--PPPSAPPMPAGP-------PSAPPPPL 1735
Query: 771 PPXPPPXXXXP 803
P P P
Sbjct: 1736 PASSAPSVPNP 1746
Score = 27.5 bits (58), Expect = 3.1
Identities = 14/46 (30%), Positives = 17/46 (36%)
Frame = +1
Query: 865 PPXXLA*XXPHPPTXXXXPPTXXPSGHTXXLPPXPPRXTASLATTP 1002
PP A P PP PP+ P P PP +S + P
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVP 1744
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 28.3 bits (60), Expect = 1.8
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +2
Query: 758 PPPTPXXPPPSXPXPXP 808
PPP P PPS P P P
Sbjct: 12 PPPPPGFEPPSQPPPPP 28
Score = 26.6 bits (56), Expect = 5.5
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +3
Query: 756 PPPPXPPXPPPXXXXPLPRP 815
PPPP P PP P P P
Sbjct: 11 PPPPPPGFEPPSQPPPPPPP 30
Score = 25.8 bits (54), Expect = 9.6
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +3
Query: 756 PPPPXPPXPPPXXXXPLPRP 815
PPPP PP P P P P
Sbjct: 10 PPPPPPPGFEPPSQPPPPPP 29
>SPAC22F8.10c |sap145||U2 snRNP-associated protein Sap145
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 27.9 bits (59), Expect = 2.4
Identities = 13/46 (28%), Positives = 17/46 (36%)
Frame = +3
Query: 720 PXXXLXILHXXXPPPPXPPXPPPXXXXPLPRPXRSXXLPXGXXRPP 857
P L + PPP P P P+P + P G +PP
Sbjct: 351 PPPWLFAMQRYGPPPSYPDLKIPGVNCPIPTGAQWGFHPGGWGKPP 396
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 27.5 bits (58), Expect = 3.1
Identities = 16/58 (27%), Positives = 18/58 (31%)
Frame = +3
Query: 762 PPXPPXPPPXXXXPLPRPXRSXXLPXGXXRPPKXSSTXTCXXXPPPXNXTXPATHXXP 935
P PP P+P S P +S T PP N T P T P
Sbjct: 249 PTVPPTSTSSTSIPIPPTSTSSTDTNSSPLPTTSTSCTTSTSIPPTGNSTTPVTPTVP 306
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 27.1 bits (57), Expect = 4.1
Identities = 22/74 (29%), Positives = 26/74 (35%), Gaps = 3/74 (4%)
Frame = -1
Query: 877 VXVEEXXGGRXXPSGKXXE---RXGRGXGXXXXGGGXGGXGGGGXXXWRMXXKXXGXGVG 707
V ++ G R P+G+ R GRG GG G GGG G G
Sbjct: 122 VGPKKPKGARNGPAGRGGRGGFRGGRGGSRGGFGGNSRGGFGGGSRG------GFGGGSR 175
Query: 706 XXEXGGXXGWGXGG 665
GG G GG
Sbjct: 176 GGSRGGFRGGSRGG 189
>SPBC1A4.03c |top2|ptr11|DNA topoisomerase II|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1485
Score = 26.6 bits (56), Expect = 5.5
Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Frame = +3
Query: 180 DAPDFFKDIEHHTKEFHKTLEQ--QFNSLTKSKDAQDFSKAW 299
D +F D++ H K FH E+ + + +K D K W
Sbjct: 665 DMKSYFSDLDRHMKYFHAMQEKDAELIEMAFAKKKADVRKEW 706
>SPAC22F8.11 |plc1||phosphoinositide phospholipase C
Plc1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 899
Score = 26.6 bits (56), Expect = 5.5
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +3
Query: 174 RRDAPDFFKDIEHHTKEFHKTLEQQFNSLT 263
++ DFFK + ++ H TL ++ NSL+
Sbjct: 56 KKSEQDFFKMLSSRDRDAHSTLRKRSNSLS 85
>SPAPB1A10.08 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 412
Score = 26.2 bits (55), Expect = 7.2
Identities = 19/64 (29%), Positives = 29/64 (45%)
Frame = +3
Query: 87 PHSVSRQYIMAAKFVVLFACIALAQGAMVRRDAPDFFKDIEHHTKEFHKTLEQQFNSLTK 266
P S S + A + L + V R F + +EH+ K+LE+Q + L +
Sbjct: 171 PSSSSCNLVNANSLDIYLNINNLKKSKSVPRLRGQFMEPVEHN-HPLSKSLEEQSSFLEQ 229
Query: 267 SKDA 278
SKDA
Sbjct: 230 SKDA 233
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 25.8 bits (54), Expect = 9.6
Identities = 13/41 (31%), Positives = 16/41 (39%)
Frame = +3
Query: 756 PPPPXPPXPPPXXXXPLPRPXRSXXLPXGXXRPPKXSSTXT 878
P PP P P P P P RS P P +++ T
Sbjct: 729 PAPPTPAPTPAVKHHPPPPPVRSSISPSMPPAPLTHANSST 769
>SPAC18B11.02c |||pseudouridylate synthase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 394
Score = 25.8 bits (54), Expect = 9.6
Identities = 16/64 (25%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +3
Query: 144 CIALAQGAMVRRDAPDFFKDIEHHTKEFH-KTLEQQFNSLTKSKDAQDFSKAWKDGSESV 320
C + +G +RR P +++ I ++ KTL + FN+ + +++ + KA ++G V
Sbjct: 13 CEYVFKGDGLRRVPPYYYEYITFAKLRWYGKTLLEVFNTEFRDRESGYYEKAIRNGQVKV 72
Query: 321 LQQL 332
Q+
Sbjct: 73 NNQI 76
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 25.8 bits (54), Expect = 9.6
Identities = 18/68 (26%), Positives = 22/68 (32%)
Frame = +1
Query: 799 PXSRXRXAPPLYRXAXPGLXXPPPXXLA*XXPHPPTXXXXPPTXXPSGHTXXLPPXPPRX 978
P + PP + A + PP PPT P+ T LPP R
Sbjct: 1002 PHGGSQIVPPPKQPANRVVPLPPTASQRASAYEPPTVSVPSPSALSPSVTPQLPPVSSRL 1061
Query: 979 TASLATTP 1002
AT P
Sbjct: 1062 PPVSATRP 1069
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,585,019
Number of Sequences: 5004
Number of extensions: 43973
Number of successful extensions: 400
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 136
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 246
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 519268360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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