Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP15_F_P15
(911 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_02_0369 - 9505330-9505652,9507262-9507532,9507649-9507690,950... 89 3e-18
01_01_1054 + 8330081-8330137,8330229-8330321,8330445-8330504,833... 38 0.011
06_01_0784 - 5868545-5868888,5868990-5869085,5870313-5870394,587... 37 0.019
08_02_1617 - 28265252-28265354,28266546-28266608,28266943-28267151 33 0.42
10_05_0043 + 8503979-8504407,8506484-8506624,8506865-8506975,850... 29 3.9
09_02_0448 - 9458463-9459752 29 5.1
10_08_0267 - 16333239-16333820,16333904-16334842,16334920-163351... 29 6.8
03_02_1035 - 13557425-13557721,13557855-13558058,13558143-135583... 29 6.8
09_06_0194 - 21469815-21470117,21470226-21470376,21470463-214707... 28 9.0
>02_02_0369 -
9505330-9505652,9507262-9507532,9507649-9507690,
9508416-9508458,9508853-9508860
Length = 228
Score = 89.4 bits (212), Expect = 3e-18
Identities = 37/51 (72%), Positives = 42/51 (82%)
Frame = +1
Query: 79 MPKYYCDYCDTYLTHDSPSVRKTHCTGRKHKDNVKFYYQKWMEEQAQHLID 231
MP+YYCDYCDTYLTHDSPSVRK H G KHK NV+ YYQ++ E+Q Q LID
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLID 51
>01_01_1054 +
8330081-8330137,8330229-8330321,8330445-8330504,
8330703-8330975,8331107-8331181,8331269-8331325,
8331409-8331549,8331656-8331706,8331795-8331944,
8331974-8332057,8332171-8332273,8332451-8332527,
8333469-8333704,8334000-8334078,8335123-8335218,
8335735-8335828,8336325-8336423,8336663-8337453
Length = 871
Score = 37.9 bits (84), Expect = 0.011
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +1
Query: 73 LKMPKYYCDYCDTYLTHDSPSVRKTHCTGRKH 168
+ + KYYCDYC+ D+P+ RK H G +H
Sbjct: 449 MPLGKYYCDYCEKQF-QDTPAARKRHLDGAQH 479
>06_01_0784 -
5868545-5868888,5868990-5869085,5870313-5870394,
5870639-5870839,5871810-5871818
Length = 243
Score = 37.1 bits (82), Expect = 0.019
Identities = 14/30 (46%), Positives = 22/30 (73%)
Frame = +1
Query: 91 YCDYCDTYLTHDSPSVRKTHCTGRKHKDNV 180
+CD+C Y+ ++ S+R TH G++HKDNV
Sbjct: 12 WCDFCKIYIANNPLSIR-THEIGKRHKDNV 40
>08_02_1617 - 28265252-28265354,28266546-28266608,28266943-28267151
Length = 124
Score = 32.7 bits (71), Expect = 0.42
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +1
Query: 79 MPKYYCDYCDTYLTHDSPSVRKTHCTGRKHKDNVK 183
M ++YC +CD Y S SV++ H ++HK +K
Sbjct: 61 MGQFYCLHCDRYFA--SESVKEEHYRSKRHKKRIK 93
>10_05_0043 +
8503979-8504407,8506484-8506624,8506865-8506975,
8507746-8508330
Length = 421
Score = 29.5 bits (63), Expect = 3.9
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 94 CDYCDTYLTHDSPSVRKTHCTGRKHKDNVK 183
C+ C + D+P V + H TG+KHK N++
Sbjct: 280 CEVCK--IQCDTPEVLRIHKTGKKHKKNLE 307
>09_02_0448 - 9458463-9459752
Length = 429
Score = 29.1 bits (62), Expect = 5.1
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -2
Query: 217 VLVPPSISDNKTSHCLYVFF 158
V++PP I D K SHCL VFF
Sbjct: 146 VVIPP-IPDKKYSHCLAVFF 164
>10_08_0267 -
16333239-16333820,16333904-16334842,16334920-16335172,
16336837-16337063,16338189-16339388
Length = 1066
Score = 28.7 bits (61), Expect = 6.8
Identities = 17/59 (28%), Positives = 23/59 (38%)
Frame = +1
Query: 229 DATTAAFKAGKNCSKSIWQQRHCNTTTLGSFGNGTRRTPTSCTRWSSRYDTSSIYGSWR 405
DA A K + Q RHC TT + +G T C S RY + + +R
Sbjct: 584 DAFPAVEKMATAAAAKGLQCRHCGTTETPQWRHGPEGHRTLCNACSMRYRSGKLVPEYR 642
>03_02_1035 -
13557425-13557721,13557855-13558058,13558143-13558332,
13558450-13558841,13558931-13559023,13559297-13559500,
13559572-13559635,13559760-13559806,13559825-13559971,
13560243-13560335,13560420-13560599,13560993-13561128,
13561216-13561466,13561556-13561669,13561794-13561991,
13562050-13562110,13562921-13563210
Length = 986
Score = 28.7 bits (61), Expect = 6.8
Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Frame = +1
Query: 55 LGC*CFLKMPKYYCDYCDTYLTHDSPSVRKTH--CTGRKHKDNVKFYYQKWMEEQAQHLI 228
+GC K+ +Y CD L D P VRKT C + + N + + E + LI
Sbjct: 200 MGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLEALKDLI 259
>09_06_0194 -
21469815-21470117,21470226-21470376,21470463-21470700,
21470784-21470991,21471107-21471309,21471407-21471508,
21471622-21472945
Length = 842
Score = 28.3 bits (60), Expect = 9.0
Identities = 16/62 (25%), Positives = 21/62 (33%), Gaps = 1/62 (1%)
Frame = +1
Query: 232 ATTAAFKAGKNCSKSIWQQRHCNTTTLGSFGNGTRRTPTSCTRWSSR-YDTSSIYGSWRS 408
A AG+ C+ + + C TRR PT C W D + SW
Sbjct: 371 ALVGNMNAGE-CAAACRRNCSCVAYAYADLSRSTRRDPTRCLMWGGELLDMEKVNESWGD 429
Query: 409 YG 414
G
Sbjct: 430 LG 431
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,541,106
Number of Sequences: 37544
Number of extensions: 299286
Number of successful extensions: 910
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 804
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 887
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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