Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP15_F_P14
         (870 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81516-3|CAB04204.1|  370|Caenorhabditis elegans Hypothetical pr...   183   2e-46
Z79598-4|CAB01868.2|  745|Caenorhabditis elegans Hypothetical pr...    33   0.20 
AF003150-1|AAB54215.1|  997|Caenorhabditis elegans Hypothetical ...    29   3.3  
Z48544-2|CAA88437.1|  766|Caenorhabditis elegans Hypothetical pr...    29   4.3  
U51994-2|AAA96065.3| 1311|Caenorhabditis elegans Hypothetical pr...    29   5.7  
U40799-4|AAA81482.1|  426|Caenorhabditis elegans Hypothetical pr...    28   10.0 

>Z81516-3|CAB04204.1|  370|Caenorhabditis elegans Hypothetical
           protein F26H9.5 protein.
          Length = 370

 Score =  183 bits (445), Expect = 2e-46
 Identities = 88/210 (41%), Positives = 124/210 (59%), Gaps = 1/210 (0%)
 Frame = +1

Query: 172 NFGAGPAKLPEEVYEIIKNELTNFENSGISLLETSHRSSTYMKLNVEIQDVVRNLLDVPD 351
           NF AGPAKLPEEV   ++ E  NF N G+S++E SHRS  +  L  E   ++R L++VPD
Sbjct: 9   NFAAGPAKLPEEVLLKMQEEQLNFNNLGVSVIEMSHRSKEFGALLNETISLIRELMNVPD 68

Query: 352 NYKVXXXXXXXXXXXXXVPLNLISRTGTADYVVTGAWSXXXXXXXXXYGKVNLVLPPTDK 531
           N+++             +PLNL      ADY+VTGAWS         Y  V  V  P+  
Sbjct: 69  NFEILFMQGGGTGQFAAIPLNLKGDHEHADYIVTGAWSSKAADEAGKYINVKKVFQPSKP 128

Query: 532 YEDIPDQTKWNLDPNASYVHICTNETIHGVEF-DFIPDTKGVPLIADMSSNIMSKKVDVS 708
           Y  +PDQ  W  D  A+Y++ C NET+HG+EF    P++  VPL+AD+SSN M++  D  
Sbjct: 129 YVTVPDQENWVHDEKAAYLYYCANETVHGIEFTPTAPESHNVPLVADVSSNFMARPFDFK 188

Query: 709 KFGVIYAGAQXNIGTSGVXLVIVXXDLLNQ 798
             GV++ GAQ N+G +G+ +VIV  DL+ +
Sbjct: 189 DHGVVFGGAQKNLGAAGLTIVIVRKDLIGK 218


>Z79598-4|CAB01868.2|  745|Caenorhabditis elegans Hypothetical
           protein C44H4.4 protein.
          Length = 745

 Score = 33.5 bits (73), Expect = 0.20
 Identities = 23/72 (31%), Positives = 36/72 (50%)
 Frame = +1

Query: 523 TDKYEDIPDQTKWNLDPNASYVHICTNETIHGVEFDFIPDTKGVPLIADMSSNIMSKKVD 702
           TD++ D+ +Q    L    +  HICT+     +E D  P TKG P + D+S N +   +D
Sbjct: 587 TDEHSDVKNQ----LINGLNKFHICTSPV--WIEIDHGPQTKGFPFLHDVSFNGI-LAID 639

Query: 703 VSKFGVIYAGAQ 738
             K  V+   A+
Sbjct: 640 KDKVNVLVEPAE 651


>AF003150-1|AAB54215.1|  997|Caenorhabditis elegans Hypothetical
           protein T05E7.3 protein.
          Length = 997

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 16/46 (34%), Positives = 26/46 (56%)
 Frame = -1

Query: 195 FSRSSAKIKHFRHFHLFIYLINSYTTLFYQTTLSFSDVSRYDVVLS 58
           F+RSS +++      LFI + N   + F +++LS+ DV     VLS
Sbjct: 717 FARSSGELEKNYIAELFIKITNPKASRFSESSLSWKDVKMSKTVLS 762


>Z48544-2|CAA88437.1|  766|Caenorhabditis elegans Hypothetical
           protein ZK945.3 protein.
          Length = 766

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +1

Query: 640 DTKGVPLIADMSSNIMSKKVDVSKFGVIYAGAQXNI 747
           D + +  +A+  SN  SKK    ++G +YAG   N+
Sbjct: 566 DKREITFLAEGDSNPHSKKTQKDRYGQLYAGITENL 601


>U51994-2|AAA96065.3| 1311|Caenorhabditis elegans Hypothetical protein
            R03G5.3 protein.
          Length = 1311

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 18/75 (24%), Positives = 38/75 (50%)
 Frame = -1

Query: 225  LNNFIDFFWQFSRSSAKIKHFRHFHLFIYLINSYTTLFYQTTLSFSDVSRYDVVLSACAT 46
            L N  ++ W ++  + K+  F     F ++ ++Y+   ++ ++ F     Y V +S CAT
Sbjct: 989  LTNSANYIWNYTPENCKL--FLKIPFF-FIKDTYSNCVFRESIFFF-YKLYFVFISFCAT 1044

Query: 45   RKSQKS*GIPYSEVV 1
             + Q+S    + E+V
Sbjct: 1045 FQEQRSVNFFHFEIV 1059


>U40799-4|AAA81482.1|  426|Caenorhabditis elegans Hypothetical
           protein F42C5.2 protein.
          Length = 426

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
 Frame = -2

Query: 134 LIPTL-HYFTKRHYRSQTCRGTMWFCLPARQENPKNL 27
           L+PT+ HYF  +H+         W CLP       NL
Sbjct: 228 LVPTIIHYFYLQHFSVPFDPDVTWVCLPLMSNEVFNL 264


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,394,441
Number of Sequences: 27780
Number of extensions: 375538
Number of successful extensions: 1052
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1020
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1051
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)